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For each observation Si, label its eigen-decompositions as

F−1(Si) =

2(p−1)p! [

j=1

{ Di(j), Ui(j)},

where versions (D1(j), U1(j)), . . . , (Dn(j), Un(j)) form an i.i.d. sample from a continuous distri- bution F with location parameter (D(j), U(j)) satisfying assumptions 1-3 from the previ- ous section. To simplify the notation of the set of location parameters, let (D(1), U(1)) = (D∗, U∗). By assumption 2 from the previous section, (D(j), U(j)) = (GjD∗GTj, U∗GTj) for some Gj ∈ G(p) for j = 1, . . . , 2(p−1)p!. Then we will denote the set of location parameters as [(D∗, U∗)] ∈ (Diag+(p) × SO(p))/G(p), which is the orbit of (D∗, U∗) under the group action of G(p) on Diag+(p) × SO(p) (as defined in subsection 3.2.1).

Let k(p) = 2(p−1)p!, and suppose that (D10, U10), . . . , (D0n, Un0) is a sample of observed eigen-decompositions as specified in assumption 3 from the previous section. Each observed eigen-decomposition has the mixture representation

(D0i, Ui0) = k(p) X j=1 (ZjD (j) i , ZjU (j) i )

where ¯Z = (Z1, . . . , Zk(p)) follows a multinomial distribution with the constraint Pk(p)

j=1Zi = 1 and probabilities ¯π = (1/k(p), . . . , 1/k(p)). This representation leads to the observed data log-likelihood from Equation 5.2, which will be difficult to optimize in practice.

If we were able to observe the version indicator variable zij for each observed eigen- decomposition (Di0, Ui0), then we could form the complete data log-likelihood

`C((D∗, U∗), Γ) = n X i=1 k(p) X j=1 zijlog[f ((GTjD 0 iGj, Ui0Gj); (D∗, U∗), Γ)] − n log(k(p))

and estimate the parameters using standard maximum likelihood estimation. The EM algo- rithm will address our missing data problem by iteratively imputing values for the unobserv- able version indicator variables and then performing maximum likelihood estimation using the complete data log-likelihood with imputed values plugged in for the version indicator variables. The steps are:

1. Choose initial estimates ( ˆD∗(0), ˆU∗(0)) and ˆΓ(0) for the parameters (D, U) and Γ and set tolerance ε > 0.

2. Expectation Step: Compute ˆ zij(k) = f ((G T jD0iGj, Ui0Gj); ( ˆD∗(k), ˆU∗(k)), ˆΓ(k)) Pk(p) j=1f ((GTjD 0 iGj, Ui0Gj); ( ˆD∗(k), ˆU∗(k)), ˆΓ(k)) 3. Maximization Step: Compute

(( ˆD∗(k+1), ˆU∗(k+1)), ˆΓ(k+1)) = argmax n X i=1 k(p) X j=1 ˆ zij(k)log[f ((GTjDi0Gj, Ui0Gj); (D∗, U∗), Γ)]

4. If |`(( ˆD∗(k+1), ˆU∗(k+1)), ˆΓ(k+1)) − `(( ˆD∗(k), ˆU∗(k)), ˆΓ(k))| > ε, then return to Step 2. Oth- erwise, set the final parameter estimates equal to ˆΦ(k+1).

We illustrate how to perform parameter estimation via the EM algorithm when the generating eigen-decompositions follow distribution F2 with p = 2 from Section 5.1 with density function f2((D, U ); (D∗, U∗), Γ) =  γ1 2πN (γ2)|D|  exp  −γ1 2d 2 D+(2)(D, D∗) − γ2 2d 2 SO(2)(U, U ∗ ) 

where |D| = det(D) and N (γ2) = p2π/γ2erf (πpγ2/2). Let S1, . . . , Sn be a random sample of SPD matrices arising from eigen-composition of the distribution F2and let (D0i, Ui0) denote an observed eigen-decomposition of Si randomly drawn from the uniform distribution on F−1(S

i). We begin with initial guesses ( ˆD∗(0), ˆU∗(0)) and ˆΓ(0) for the parameters (D∗, U∗) and Γ.

Performing the expectation step after k iterations simply requires computing ˆ zij(k)= f2((G T jD0iGj, Ui0Gj); ( ˆD∗(k), ˆU∗(k)), ˆΓ(k)) P4 j=1f2((GTjDi0Gj, Ui0Gj); ( ˆD∗(k), ˆU∗(k)), ˆΓ(k)) for i = 1, . . . , n and j = 1, . . . , 4.

Performing the maximization for the k + 1 iteration requires solving ˆ D∗(k+1) = argmin D∈Diag+(2) n X i=1 4 X j=1 zˆ(k) ij n  d2D+(2)(GTjDi0Gj, D) (5.3) ˆ U∗(k+1) = argmin U ∈SO(2) n X i=1 4 X j=1 zˆ(k) ij n  d2SO(2)(Ui0Gj, U ) (5.4)

to obtain estimates for the location parameters. It can be shown that ˆ D∗(k+1) = n X i=1 4 X j=1 zˆ(k) ij n  GTjD0iGj

and that solving for ˆU∗(k+1) requires locating U ∈ SO(2) that satisfy n X i=1 4 X j=1 zˆ(k) ij n  Log(Ui0GjUT) = 0.

After substituting ( ˆD∗(k+1), ˆU∗(k+1)) for (D∗, U∗) into the approximate complete data log-likelihood, we can solve the equations

ˆ γ1(k+1) = argmax γ1 n log(γ1) −γ1 2 n X i=1 4 X j=1 zˆ(k) ij n  d2D+(2)(GTjD0iGj, ˆD∗(k+1)) (5.5) ˆ γ2(k+1) = argmax γ2 −n log(N (γ2)) − γ2 2 n X i=1 4 X j=1 zˆ(k) ij n  d2SO(2)(Ui0Gj, ˆU∗(k+1)) (5.6)

to obtain estimates for the concentration parameters. After differentiatingEquation 5.5and setting the derivative equal to 0, we have that

ˆ γ1(k+1) = 1 2 n X i=1 4 X j=1 zˆ(k) ij n  d2D+(2)(GTjDi0Gj, ˆD∗(k+1)) −1 .

From differentiating Equation 5.6 and setting the derivative equal to 0, we get that ˆγ2(k+1) should satisfy V (ˆγ2(k+1)) = −N 0γ(k+1) 2 ) N (ˆγ2(k+1)) = n X i=1 4 X j=1 zˆ(k) ij n  d2SO(2)(Ui0Gj, ˆU∗(k+1)).

It is shown in [12] that V is a one-to-one function, so ˆγ2(k+1)is unique and can be approximated with a numerical procedure such as Newton’s method.

To demonstrate the performance of this estimation method, we performed simulation experiments drawing 500 samples of size n = 50, 100, and 500 from the distribution F2 with p = 2 and parameters γ1 = 2, γ2 = 5, D∗ =   10 0 0 2  , and U∗ =   cos(π/6) − sin(π/6) sin(π/6) cos(π/6)  .

Table 6: Empirical Mean Squared Error (MSE) from 500 Simulations Parameter n = 50 n = 100 n = 500

(D∗, U∗) 1.6042 0.8928 0.1756

γ1 0.1068 0.0493 0.0089

γ2 1.7845 0.8069 0.1237

We computed the empirical mean squared error from estimating (D∗, U∗) using the formula

M SE((D∗, U∗)) = 1 500 500 X t=1 kF ( ˆD∗t, ˆUt∗) − F (D∗, U∗)k2F

where ( ˆDt∗, ˆUt∗) is the sample estimate for (D∗, U∗) from sample t. We can see in Table 6

that the empirical MSE for each parameter decreases as n increases, suggesting that the EM estimation procedure is consistent for this example.

5.4 DISCUSSION

It would be interesting to establish conditions on the distribution of the generating eigen- decompositions which would guarantee that the EM algorithm would find a global maximizer of the likelihood function and would provide consistent estimates. Perhaps more interesting, the mixture likelihood-based estimation framework proposed in this chapter can easily be extended to create likelihood ratio tests for single and multi-sample inference. For example, to test the null hypothesis that (D∗, U∗) = (D(0), U(0)), Γ = Γ0, one could use the test statistic

Λ = 2[`(( ˆD∗, ˆU∗), ˆΓ) − `((D0, U0), Γ0)],

where `(( ˆD∗, ˆU∗), ˆΓ) is the observed log-likelihood evaluated at the EM parameter estimates and `((D0, U0), Γ0) is the observed log-likelihood evaluated at the null hypothesis param- eter values. Under the null hypothesis, we conjecture that Λ will asymptotically follow a chi-square distribution with degrees of freedom equal to the number of free parameters in D∗, U∗, and Γ.

Given data from two independent samples, it might be of interest to test the null hy- pothesis that the two samples have the same location parameters (i.e. (D∗1, U1∗) = (D∗2, U2∗)) while assuming that they have the same concentration parameters. For this test, we could use the test statistic

Λ = 2[`(( ˆD1∗, ˆU1∗), ˆΓpooled) + `(( ˆD2∗, ˆU ∗

2), ˆΓpooled) − `(( ˜D∗, ˜U∗), ˜Γ)],

where ( ˆD∗1, ˆU1∗) and ( ˆD2∗, ˆU2∗) are the EM location estimates for samples 1 and 2 under the alternative hypothesis, ˆΓpooled contains the pooled concentration parameter estimates under the alternative hypothesis, and ( ˜D∗, ˜U∗) and ˜Γ are the EM estimates for the location and concentration parameters under the null hypothesis after combining both samples into one sample. We conjecture that, under the null hypothesis, this test statistic will asymptoti- cally follow a chi-square distribution with degrees of freedom equal to the number of free parameters in D∗ and U∗.

BIBLIOGRAPHY

[1] D. Alexander, Muliple-fibre Reconstruction Algorithms for Diffusion MRI, Annals of the New York Academy of Sciences 1046 (2005), pp. 113-133.

[2] V. Arsigny, P. Fillard, X. Pennec, and N. Ayache, Geometric Means in a Novel Vector Space Structure on Symmetric Positive-Definite Matrices, SIAM J. Matrix Anal. Appl., 20 (2007), pp. 328-347.

[3] B. Asfari, Riemannian Lp Centers of Mass: Existence, Uniqueness, and Convexity, Proc. Amer. Math. Soc., 139 (2011), pp. 655-673.

[4] P.G. Batchelor, M. Moakher, D. Atkinson, F. Calamante, A. Connelly, A Rigorous Framework for Diffusion Tensor Calculus, Magnet. Reson. Med., 53 (2005), pp. 221- 225.

[5] R. N. Bhattacharya and L. Lin, Omnibus CLTs for Fr´echet Means and Non-Parametric Inference on Non-Euclidean Spaces, Proc. Amer. Math. Soc., 145 (2017), 413-428. [6] R. N. Bhattacharya and V. Patrangenaru, Large Sample Theory of Intrinsic and Ex-

trinsic Sample Means on Manifolds-I, Annals of Statistics, 31 (2003), pp. 1-29.

[7] R. N. Bhattacharya and V. Patrangenaru, Large Sample Theory of Intrinsic and Ex- trinsic Sample Means on Manifolds-II, Annals of Statistics, 33 (2005), pp. 1225-1259. [8] P. Bickel, E. Levina, Regularized Estimation of Large Covariance Matrices, Annals of

Statistics, 36 (2008), pp. 199-227.

[9] O. Carmichael, J. Chen, D. Paul, and J. Peng, Diffusion Tensor Smoothing Through Weighted Karcher Means, Electronic Journal of Statistics, 7 (2013), pp. 1913-1956. [10] T.C. Chao, M.C. Chou, P. Yang, H.W. Chung, M.T. Wu, Effects of Interpolation Meth-

ods in Spatial Normalization of Diffusion Tensor Imaging Data on Group Comparisons of Fractional Anisotropy, Magn. Reson. Imaging, 27 (2009), pp. 681-690.

[11] Y. Chikuse, Statistics on Special Manifolds, Springer, New York, 2003.

[12] J-F Coeurjelly, N. Le Bihan, Geodesic Normal Distribution on the Circle, Metrika, 75 (2012), pp. 977-995.

[13] M. Daniels, R. Kass, Shrinkage Estimators for Covariance Matrices, Biometrics, 57 (2001), pp. 1173-1184.

[14] M. Daniels, M. Pourahmadi, Bayesian Analysis of Covariance Matrices and Dynamic Models for Longitudinal Data, Biometrika, 89 (2002), pp. 553-566.

[15] I.L. Dryden, A.A. Kolydenko, and D. Zhou, Non-Euclidean Statistics for covariance matrices, with applications to diffusion tensor imaging, Ann. Applied Statistics 3 (2009), pp. 1102-1123.

[16] M. DoCarmo, Riemannian Geometry, Birkhauser, Boston, 1992.

[17] P. T. Fletcher, Geodesic Regression and the Theory of Least Squares on Riemannian Manifolds, Int J Comput Vis, 105 (2013), pp. 171-185.

[18] P. T. Fletcher, T. Lu, C. Lu, S. Pizer, and S. Joshi, Principal Geodesic Analysis for the Study of Non-Linear Statistics of Shape, IEEE Trans on Med Imaging 23 (2004), pp. 995-1005.

[19] M. Fr´echet, Les ´el´ements al´eatoires de nature quelconque dans un espace distanci´e, Ann. Inst. H. Poincar´e Probab. Statist. 10 (1945), pp. 215-310.

[20] J. H. Gallier, Geometric Methods and Applications: For Computer Science and Engi- neering, Texts Appl. Math. 38, Springer, New York, 2011.

[21] J.C. Gower, Generalized Procrustes Analysis, Psychometrika, 40 (1975), pp. 33-51. [22] D. Groisser, S. Jung, A. Schwartzman, Eigenvalue Stratification and Minimal Smooth

Scaling-Rotation Curves in the Space of Symmetric Positive Definitie Matrices, arXiv:1602.01187v3, 2016.

[23] D. Groisser, S. Jung, A. Schwartzman, Geometric Foundations for Scaling-Rotation Statistics on Symmetric Positive Definite Matrices: Minimal Smooth Scaling-Rotation Curves in Low Dimensions, Electronic Journal of Statistics, 11 (2017), pp. 1092-1159. [24] K. Grove, H. Karcher, E. A. Ruh, Jacobi Fields and Finsler Metrics on Compact Lie Groups with an Application to Differentiable Pinching Problems, Mathematische Annalen, 211 (1974), pp. 7-21.

[25] N. Higham, A. Al-Mohy, Computing Matrix Functions, Acta Numerica, 19 (2010), pp. 159-208.

[26] S. Huckemann, Inference on 3D Procrustes Means: Tree Bole Growth, Rank-Deficient Diffusion Tensors, and Perturbation Models, Scandinavian Journal of Statistics, 38 (2011), pp. 424-446.

[27] S. Huckemann, Intrinsic Inference on the Mean Geodesic of Planar Shapes and Tree Discrimination by Leaf Growth, Annals of Statistics, 39 (2011), pp. 1098-1124.

[28] S. Jung, A. Schwartzman, D. Groisser, Scaling-Rotation Distance and Interpolation of Symmetric Positive-Definite Matrices, SIAM J. Matrix Anal. Appl., 36 (2015), pp. 1180-1201.

[29] H. Karcher, Riemannian Center of Mass and Mollifier Smoothing, Comm. Pure Appl. Math., 30 (1977), pp. 509-541.

[30] C. Khatri and K. Mardia, The Von Mises-Fisher Matrix Distribution in Orientation Statistics, Journal of the Royal Statistical Society Series B, 39 (1977), pp. 95-106. [31] P.B. Kingsley, Introduction to Diffusion Tensor Imaging Mathematics: Part II.

Anisotropy, Diffusion-weighting Factors, and Gradient Encoding Schemes, Concepts in Magnetic Resonance Part A 28A (2006), pp. 123-154.

[32] H. Le, Locating Fr´echet Means with Application to Shape Spaces, Adv. in Appl. Probab., 33 (2001), pp. 324-338.

[33] N. Lepore, C. Brun, M. Chiang, Y. Chou, R. Dutton, K. Hayashi, E. Luders, O. Lopez, H. Aizenstein, A. Toga, J. Becker, and P. Thompson, Generalized Tensor-Based Morphometry of HIV/AIDS Using Multivariate Statistics on Deformation Tensors, IEEE Trans Med Imaging, 27 (2008), pp. 129-141.

[34] J. Manton, A Globally Convergent Numerical Algorithm for Computing the Centre of Mass on Compact Lie Groups, ICARV 2004 8th Control, Automation, Robotics, and Vision Conference.

[35] K. Mardia and P. Jupp, Directional Statistics, John Wiley and Sons Ltd., 2000. [36] M. Moakher, Means and Averaging in the Group of Rotations, SIAM J. Matrix Anal.

Appl., 24 (2001), pp. 1-16.

[37] M. Moakher, A Differential Geometric Approach to the Geometric Mean of Symmetric Positive-Definite Matrices, SIAM J. Matrix Anal. Appl., 26 (2005), pp. 735-747. [38] N. Paquette, J. Shi, Y. Wang, Y. Lao, R. Ceschin, M. D. Nelson, A. Panigrahy, and N.

Lepore, Ventricular Shape and Relative Position Abnormalities in Preterm Neonates, Neuroimage Clin., 15 (2017), pp. 483-493.

[39] X. Pennec, Intrinsic Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements, J. Math Imaging Vis., 25 (2006), pp. 127-154.

[40] X. Pennec, P. Fillard, and N. Ayache, A Riemannian Framework for Tensor Comput- ing, Int. J. Comput. Vis., 66 (2006), pp. 41-66.

[41] W. Rudin, Principles of Mathematical Analysis, McGraw-Hill, 1976.

[42] A. Schwartzman, Random Ellipsoids and False Discovery Rates: Statistics for Diffusion Tensor Imaging Data, Ph. D. Thesis, Stanford University, Stanford, California, 2006.

[43] A. Schwartzman, Lognormal Distribution and Geometric Averages of Symmetric Pos- itive Definite Matrices, International Statistical Review, 0 (2015), pp. 1-31.

[44] A. Schwartzman, W. Mascarenhas, and J. Taylor, Inference for Eigenvalues and Eigen- vectors of Gaussian Symmetric Matrices, Annals of Statistics, 36 (2008), pp. 2886-2919. [45] A. Schwartzman, R. Dougherty, and J. Taylor, Group Comparisons of Eigenvalues and Eigenvectors of Diffusion Tensors, Journal of the American Statistical Association, 105 (2010), pp. 588-599.

[46] P. Sundgren, Q. Dong, D. Gomez-Hassan, S. Mukherji, P. Maly, and R. Welsh Diffu- sion Tensor Imaging of the Brain: Review of Clinical Applications, Neuroradiology 46 (2004), pp.273-282.

[47] C. Tench, P. Morgan, M. Wilson, and L. Blumhardt, White Matter Mapping Using Diffusion Tensor MRI, Magnetic Resonance in Medicine, 47 (2002), pp. 967-972. [48] D. Zhou, I.L. Dryden, A.A. Koloydenko, K. Audenaert, L. Bai, Regularisation, Interpo-

lation, and Visualisation of Diffusion Tension Images Using Non-Euclidean Statistics, Journal of Applied Statistics, Vol. 43, Issue 5, 2016.

[49] H. Zhu, Y. Li, I. Ibraham, X. Shi, H. An, Y. Chen, W. Gao, W. Lin, D. Rowe, and B. Peterson, Regression Models for Identifying Noise Sources in Magnetic Resonance Images, Journal of the American Statistical Association, 104 (2009), pp. 623-637. [50] H. Ziezold, On Expected Figures and a Strong Law of Large Numbers for Random Ele-

ments in Quasi-Metric Spaces, Transactions of the Seventh Prague Conference on In- formation Theory, Statistical Decision Functions, Random Processes and of the Eighth European Meeting of Statisticians (Tech. Univ. Prague, Prague, 1974), Vol. A, pp. 591-602.

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