Concluding Remarks

5.2 Implications and topics for future research

5.2.1 Forest Remote Sensing

The results of this dissertation reflect advances in forest remote sensing over the previous century. Consistent data time series, free access to imagery, and cloud computing allow for complex analysis over the Amazon Ecoregion. The procedures used here were adapted from previous research, including

spectral mixture analysis and calculation of NDFI (Adams et al., 1995; Souza et al., 2005), structural break detection (Kennedy et al., 2010; Verbesselt et al., 2010; Zhu and Woodcock, 2014), large area forest monitoring on GEE (Hansen et al., 2013), area estimation through statistical inference

(McRoberts, 2011; Olofsson et al., 2014; Stehman, 2013), sample

interpretation (Stehman, 1999; Tyukavina et al., 2017a), and land cover classification (Friedl et al., 2002; Pal, 2005). Access to these tools and data have facilitated methodologies, such as CODED, that are designed to detect subtle changes in forest condition.

While designed in Rondônia and applied in the Amazon Ecoregion, it is likely that CODED is applicable to other forest ecosystems. CODED has already been implemented in Guatemala (Bullock et al., In Press) and the Republic of Georgia (Chen et al., Unpublished), and tested in Uruguay, Paraguay, Costa Rica, and Laos. While the Amazon Ecoregion is relatively ecologically homogenous and therefore could use a single set a parameters for

the change detection, expanding to diverse landscapes will require adjustments to the algorithm and different parameterization.

Currently, we are using a set of endmembers that were calculated for the Amazon (Souza et al., 2005). However, these endmembers will not accurately characterize other landscapes if there are drastic ecological differences. Future research should evaluate approaches to calculating endmembers. A possible approach is to use a multi-endmember model that allows for different endmembers for each observation, although that has yet to be tested with time series data (Roberts et al., 1998). The sensitivity of CODED to disturbance should also be compared for differing ecological and climatic conditions.

Spectral mixture analysis improves the sensitivity of CODED to partial canopy damage. However, it is likely that detection of smaller disturbance patches can be achieved using higher resolution data, such as Sentinel 2. The spectral bands are slightly different for Landsat and Sentinel 2, indicating that the current implementation could not be directly

implemented on Sentinel 2 data. Additionally, CODED requires multiple years of data for the training period before change can be detected and, since Sentinel 2-A was first launched in 2015, could only be used for monitoring disturbance after 2016.

The current implementation of CODED relies on spectral and temporal metrics to detect change. However, it is possible that disturbance can be more accurately detected by incorporating spatial information. The LandTrendr forest monitoring algorithm uses spatial segmentation to find congruent patches of disturbance (Kennedy et al., 2010). The resulting change maps contain clusters that represent specific change events. I believe a similar approach could be advantageous for change monitoring with CODED. The resulting change map would contain less “salt and pepper” noise, and the shape of the patches (e.g. patch size or roundness) could be useful for classifying disturbance type.

During this dissertation I compared change maps created using CODED to field data on dates and locations of fire and selective logging presented in Longo et al. (2016) and Rappaport et al. (2018). Whiles overall the maps corresponded well to the field data, there were notable examples of errors of omission in the CODED change maps. The statistical estimators used in this dissertation accounted for these errors when reporting areas. However, these data will be useful for calibrating the CODED methodology and reducing errors of omission in the future. By reducing errors of omission the dataset will be more useful for spatial analysis. Additionally, as errors of omission increase uncertainty in the area estimates, a more accurate

For Chapter 3 of this dissertation I utilized a secondary change detection algorithm to locate possible errors of omission. The approach was based on an offline version of CUSUM and therefore detected change in a fundamentally different way than CODED. However, both change detection approaches utilize regression models, which requires a semi-consistent data time series. It is likely that neither approach would effectively detect

disturbance in regions with minimal cloud-free data. In such locations, it may be preferable to detect change using image composites or direct classification of multi-date imagery. Given the minimal computational requirements for performing change detection, I believe future methodology development should focus on ensemble algorithms that can effectively detect change under varying levels of data availability.

For this dissertation, I utilized unbiased statistical estimators to calculate area and variance. Consequently, the area estimates reported in this dissertation were generally consistent with “Good Practice” guidelines for reporting areas of disturbance (Penman et al., 2003). However, there is still a need for improvements on research designs that can efficiently

estimate areas with high precision. For example, in this dissertation I did not differentiate degradation and natural disturbances. However, with the

availability of medium-to-high resolution Sentinel 2 and Planet data, I believe this distinction can be determined in the future. This will be

necessary for programs such as REDD+, in which distinguishing

anthropogenic and natural disturbance is essential. I believe that activity data on degradation can be achieved using the CODED methodology to produce a change map, then deriving a sample and assigning disturbance type labels by comparing the samples to high-quality reference data. The activity data (or areas of specific disturbance types) could then be estimated with a post-stratified estimator (Olofsson et al., 2013b).

The results of this dissertation were the first attempt to estimate areas for the entire study region. The area estimates are considered unbiased and provide an estimate of uncertainty. However, sample-based estimates of area do not provide information about spatial patterns. It is likely that D/ND and deforestation are strongly correlated with human activity and development, and possible that they correspond to certain forest types or ecological

conditions. Comparison of multiple spatial variables (such as disturbance and population) is challenging using statistical inference, and therefore it would be useful to analyze trends directly with the mapped disturbance dataset. This analysis could give insight as to predictors of future disturbance, which would be useful for planning conservation initiatives.

5.2.2 Conservation and Restoration

In the 20th century, increasing ecological destruction and land degradation

has been met with efforts to conserve tropical forests ("World Conservation Strategy", 1980; Watson et al., 2014). Conservation in the Amazon has received particular international attention due to its’ importance in global natural systems and the extensive indigenous communities (Nepstad et al., 2006; Schwartzman and Zimmerman, 2005). The disturbance dataset produced in Chapter 3 would be useful for evaluating the effectiveness of protected areas across the Amazon. In particular, it can be used to determine whether disturbances in protected areas are being driven by land conversion through deforestation or D/ND.

The CODED methodology developed in Chapter 2 would be applicable for international carbon offset programs that promote conservation.

Currently, there are few countries that report emissions from degradation for REDD+ or other greenhouse gas reporting mechanisms (Milbank et al.,

2018). This research shows that it is possible to estimate area and emissions from D/ND that are unbiased and provide an estimate of uncertainty.

This dissertation found that the rates of deforestation and D/ND in the Amazon have changed since 1995. D/ND appears to be increasing due to droughts, resulting in a similar aboveground carbon loss as deforestation. While previous conservation initiatives have focused on large-scale

deforestation (Godar et al., 2014), our results stress the importance of prioritizing efforts to prevent or mitigate D/ND. Ultimately, restoration priorities are project-specific and deforestation and D/ND result in different ecological changes. Regardless, the effects of D/ND on Earth’s natural systems cannot be ignored when planning for long-term conservation initiatives.

While this dissertation details the extent of disturbed forests in the Amazon, those forests offer opportunities for restoration and resilience. Restoration of degraded forests can restore ecosystem services and sequester carbon from the atmosphere. Before this is realized, however, it is essential for disturbed forests to be mapped and quantified. The disturbance dataset produced in Chapter 3 can be used for targeting forests for restoration through projects such as Initiative 20 x 20 (Vergara et al., 2016).

5.2.3 The Carbon Cycle

The tropical forest carbon flux is considered one of the largest sources of uncertainties in the global carbon cycle (Houghton et al., 2001). While the Amazon is only part of the global tropical forest ecosystems, it contributes approximately 11-66% of the global carbon emissions from land cover change (Chapter 4). This dissertation supports previous estimates of emissions due to deforestation, but suggests that there is an unaccounted for source of emissions due to D/ND. In addition to the previously reported emissions from

deforestation, this dissertation suggests that there are an additional 0.12 Pg C/year emitted due to D/ND, equivalent to 13% global emissions from land use change.

The carbon model used in this dissertation was limited due to a lack of data to parameterize the model. Future research about the carbon dynamics of D/ND would greatly benefit from extensive field campaigns to disturbed forests. Ideally, forest conditions would be examined before and after a disturbance. Specifically, there is a need for information on emissions due to D/ND for the major forest carbon pools. It is possible that carbon loss from a disturbance is correlated with spectral change in corresponding Landsat images, which is recorded in CODED as the change magnitude. It is also possible that regeneration is modeled by the slope coefficient in the post- disturbance regression model. Put simply, there is value in comparing the change metrics calculated in CODED to field data on forest change.

5.2.4 The Amazon

This dissertation found that the estimated area of disturbance in the Amazon is 44-60% higher than comparable assessments. Consequently, the Amazon is closer to the theorized “tipping point” for hydrological collapse than

previously realized (Lovejoy and Nobre, 2018). The extreme droughts in 2005, 2010, and 2016 may be early indications of a drastic hydrologic response to disturbance and climate change. It is likely, however, that D/ND does not

have the same widespread effect as deforestation. More research is needed on the regional effect of D/ND on weather patterns, the hydrologic cycle, and biodiversity.


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