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SCALABLE AND ROBUST CLUSTERING AND VISUALIZATION FOR LARGE SCALE BIOINFORMATICS DATA

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Figure

Figure 3.29: The time cost of parallel WDA-SMACOF processing 100k AM Fungal data with number of processors increased from 512 to 4096
Figure 3.32: The time cost comparison of WDA-SMACOF and MI-MDS. The in-sample data coordinates are fixed, and rest out-of-sample data coordinates can be varied
Figure 4.1: The flowchart of parallel W-MI-MDS using an MapReduce framework
Figure 4.2: An illustration of SSP-Tree with 8 sequences. The upper chart is the tree relationships, and chart below is the actual representation of SSP-Tree in 2D
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