0022-538X/79/02-0529/07$02.00/0
Involvement of
DNA
Gyrase
in
Replication
and
Transcription
of Bacteriophage T7
DNA
MARK A.DR WYNGAERTANDDAVIDC. HINKLE*
Departmentof Biology, Universityof Rochester, Rochester,NewYork 14627
Received forpublication21September1978
GrowthofbacteriophageT7 is inhibitedbythe antibioticcoumermycin A1,an
inhibitor of the Escherichia coli DNA gyrase. Since growth of the phage is
insensitive to the antibiotic in strains containingacoumermycin-resistant DNA gyrase,this enzyme appearstoberequiredforphage growth.We haveinvestigated the effectofcoumernycinonthe kinetics ofDNA, RNA, andprotein synthesis during T7 infection. DNAsynthesis is completelyinhibitedbythe antibiotic. In
addition, coumermycin significantly inhibits transcription of late butnot early
genes.Thus,E. coli DNAgyrase mayplayanimportantrole intranscriptionas
wellas inreplicationof T7 DNA.
The Escherichia coli enzyme DNA gyrase introducesnegative superhelicalturnsintoa cir-cular,double-strandedDNA in an ATP-depend-ent reaction. Thegenetic locus(cou)which
de-termines resistance to coumermycin A, and to
novobiocin has beenidentified ascontrollingthe
activityof DNA gyrase(5).DNAgyrase isolated from wild-type cellsis inhibited byboth these
antibiotics, whileenzyme from a Cour strain is
resistanttoinhibition. Morerecently, asecond subunit of DNA gyrase has been identified as
the product ofnalA, a different genetic locus
which determines resistance to nalidixic acid and to oxolinic acid (22). Thus, DNA gyrase appears to be the specific targetfor inhibition
byall four of these antibiotics.
It has beenknown for sometimethat nalidixic
acid inhibitsthereplicationofbacteriophageT7
DNA (1). Therecentidentificationof thenalA
protein as a subunit of DNA gyrase suggests that thisnovel enzymeplaysanessential rolein
T7DNAreplication. Consistent withthis, Itoh and Tomizawa have recently shown that T7
DNA replication is also sensitive to the anti-bioticcoumermycin (8).
We have investigated the effect of
coumer-mycinonbacteriophageT7nucleic acid
synthe-sis.Ourresults indicate that E. coliDNAgyrase isrequiredfor efficienttranscriptionofmanyof
thelatephagegenes, aswellasforphageDNA
synthesis.
MATERIALS AND METHODS
Bacterial strains and bacteriophage. The E. coli K-12 strains NI748(coumermycin resistant) and
NI 747 (coumermycin sensitive), which are parallel
transductantsofCRT46 (5), were obtained from M.
Gellert.E.coliB/1wasfrom M.Chamberlin.T7
wild-typeandamber mutants were obtained from F. W.
Studier.For convenience, T7 mutants are designated
bygeneonly. The amber mutations used are gene 1,
am193; gene 5, am 28; gene 6, am 147.
Chemicals. Coumermycin Al (referredto as
cou-mermycin), lot 448, was a gift of W. F. Minor, Bristol
Laboratories, Syracuse,N.Y.Coumermycin wasadded
tocultures from a stock solution (10 mg/ml) in
di-methyl sulfoxide. [3H]thymidine (20 Ci/mmol) and
[3Hluridine (20 Ci/mmol) were from New England NuclearCorp.,and"4C-labeledL-amino acid mixture (50mCi/mAtom of carbon) was from Amersham.
Kinetics ofDNA, RNA,andproteinsynthesis.
Bacteria were grown in a gyratory shaker at
300C
in M9 medium or, for the K-12 strains NI 747 and NI 748, in M9 mediumsupplemented,perml, with 2 ,ug ofthymine,5
jug
ofthiamine,and60,ugeachof threonine,valine, leucine,and isoleucine. At a density of 2.5 x
10'cellsperml,bacteria wereinfectedwith T7phage
at amultiplicityof 10. To measure the rate of DNA,
RNA, or protein synthesis, 0.1-mlsamples were
re-movedfromthe culture andplacedintubescontaining
10p1 of[3H]thymidine (50 ,uCi/ml), [3H]uridine (50
MCi/ml),or
"4C-labeled
amino acids (5ACi/ml).
After 1min at300C,synthesis was terminated by the addi-tion of 3 ml of cold 10% trichloroacetic acid. TheprecipitateswerecollectedonWhatmanGF/C filters
andwashed five times with 3 ml of cold 1 N HCI and
finallywith 3 ml of coldethanol. Radioactivityonthe dried filters was determined in atoluene-basedsolvent
in aliquidscintillationcounter.
UVirradiation. Forexperimentsin whichbacteria wereirradiated with UV light prior to T7 infection, 10
mlofbacteria(2.5x10'cellsper ml) was placed in a
sterileopenpetridish(12 by 100 mm) andirradiated at 254 nmwith a GeneralElectric G8T5germicidal lampfor 2.5 min at a fluence of 3.3J/m2per s. The
cells were thenreturnedtoa sterile flask and
incu-bated in a gyratory shaker at
300C
for 20minprior to infection.529
on November 10, 2019 by guest
http://jvi.asm.org/
530 DE WYNGAERT AND HINKLE
RESULTS
Coumermycin inhibits growth of bacte-riophage T7. Theeffect ofcoumermycinonthe growth of phage T7 in E. coliB/1 and in the isogenic K-12 strains NI 747 Cou' and NI 748 Courisshown inFig.1.In10-,ug/ml coumermy-cin, the burst sizeinB/1 wasreducedto6% of the control. Growth in both K-12 strains was
somewhatless sensitive to the drug, but at 10
,ug/ml
the burst in the coumermycin-sensitivestrainwasreducedto20%ofthecontrol,whereas growth in the resistant strain was unaffected. Since the coumermycin-resistant strain NI 748 has been shown to contain a coumermycin-re-sistant DNA gyrase (5), these results suggest thattheE. coliDNA gyraseplaysan essential roleinbacteriophage growth.
Effectof coumermycinonT7DNA,RNA,
and
protein synthesis.
The effect ofcoumer-mycin on DNA, RNA, and protein synthesis duringT7 infection ofE. coli B/1 isshown in Fig. 2a, b, and c. The rate of both DNA and RNAsynthesiswassignificantlyreduced in the presenceof the antibiotic. Proteinsynthesiswas
alsoreduced, butthe effectwaslesspronounced and probably resulted from the inhibition of transcription.
To better measure theeffectofcoumermycin on phage RNA and protein synthesis, we also carriedoutthis
experiment
usingcells in which hostsynthesiswasshut offprior
tophage infec-tionby irradiation with UVlight (Fig. 2d,e,andf).
It is apparent that phage transcription issignificantly
inhibited by theantibiotic,
espe-ciallyatlatertimesduringinfection.Thus,at6,
s0
a,
N 60
m
20
0
1 25 5 10 20 50 100
ug/ml COUMERMYCIN
FIG. 1. Coumermycin inhibits the growth of bac-teriophage T7. One-step growth experiments were
carriedoutin Tbrothat30°Casdescribed by Baird
etal. (1).At 5min after infection, infectivecenters
weredilutedintobroth containing the indicated final concentrations of coumermycin. The burst size is presentedasthepercentageofacontrolcontaining no coumermycin. The bacterial strains used were:
B/l (A);NI747(0);NI748Cou' (0).
9, 12, and 15 min after infection coumermycin
inhibited RNAsynthesisby47, 58,63,and 81%, respectively.
Todemonstrate that the effect of coumermy-cin on both T7 DNA and RNAsynthesis results from inhibition of the E. coli DNA gyrase, we determinedthe effect of the antibiotic on phage DNA, RNA, and protein synthesis using the isogenic K-12 strains NI 747 Cous and NI 748 Cour (Fig. 3).The addition of30,ug of coumer-mycin per ml to the resistant strain had little affect onT7 DNA, RNA, or protein synthesis (Fig. 3a, b, and c), whereas the coumermycin-sensitiveK-12strain gave resultssimilartothose found for E. coli B/1 (Fig. 3e, f, and g). The experiments shown in Fig. 3 were done using UV-irradiated cells, but similar results have beenobtainedusing non-irradiated cells.
The effectsofcoumermycinconcentration on the inhibition of T7 DNA, RNA, and protein synthesisarecompared in Fig. 4. The response tocoumermycinwassimilar for the inhibition of bothDNA andRNAsynthesis, althoughinboth casessynthesiswas more sensitive to the anti-biotic at later timesduringthe infection.
Insummary, coumermycin causes an almost complete inhibition of phage DNAreplication andsignificantly reduces the rate of phage tran-scription.Thisstronglysuggeststhat the E. coli DNA gyraseplaysanimportantrolein both T7 DNA andRNA synthesis.However, it is possible thatDNA gyraseisnotrequiredfor phage nu-cleicacid synthesisbut that,inthe presence of coumermycin, a drug-enzyme complex acts as
an inhibitor. Although this second possibility
seems
unlikely,
it cannot be ruled out at thepresenttime.
Transcription of early genes is not in-hibited by coumermycin. The results pre-sented above indicate thatatearly times during infection T7 transcription is only slightly in-hibited by coumermycin. To test directly whetherearly transcription is inhibitedby the antibiotic, we measured the effect of coumer-mycinon transcription duringinfection witha T7gene1amber mutant. The T7 gene 1 protein isanRNApolymerase that is required for tran-scription of the class II and class III genes. During infection by gene 1 mutants, only the class I or early genes are transcribed. In the absence of the gene 1 RNA polymerase, T7
transcriptionwascompletelyunaffectedby
cou-mermycin (Fig. 5a). This suggests that DNA
gyrase is not required for transcription of the early genes by thehostRNApolymerase.
Coumermycininhibition of T7 transcrip-tion doesnotrequireDNAsynthesis.Since
DNAgyraseplaysan essential role inT7 DNA
0
I
J. VIROL.
on November 10, 2019 by guest
http://jvi.asm.org/
[image:2.505.85.227.452.581.2]10
20
I0
U
i
0
7 20
-4-~~~ ~ ~ ~ ~ ~
~~~i-120--~~~~~~
4-i~~~~~~~~
0 10 2 0 1 0 10 0 30 10 I 10
20i 30i
[image:3.505.116.399.53.315.2]MI NUTES
FIG. 2. Effect of coumermycinonT7DNA,RNA,andproteinsynthesisin normal andLW-irradiatedcells.
TherateofDNA (a, d),RNA(b,e),andprotein (c,f) synesiswasmeaswuredatintervalsafterinfection of
normal(a,b, c)orUV-irradiated(d,e,f)E. coliB/1withT7phageasdescribedin thetext. Threeminutes
before infection, 30pg of coumermycinperml (0) oranequivalent amountofthe drug diluent dimethyl
sulfoxide(0)wasaddedtothe culture.
U
a.
CL)
6
i
2
0
6
i
2
0
0
r--s_-
104-20ti----30 A1O0 04-+10 720i-4--4-30 100 0 -1-MINUTESFIG. 3. Effect ofcoumermycin on T7DNA, RNA, andprotein synthesis incoumermycin-sensitive and -resistantcells.Procedureswereas described in thelegendtoFig.2.E.coli NI 748Cou' (a, b, c) and NI 747 Cou'(d,e,g)wereirradiated with LWlightpriortoinfection.Control(0);30pgofcoumermycinper ml(0).
531
on November 10, 2019 by guest
http://jvi.asm.org/
[image:3.505.116.398.379.634.2]532 DE WYNGAERT AND HINKLE
~~~~~20j
3010
0 10 20 30 *0 0 10 20 30 10 0 10 20 30 10
MINUTES
FIG. 4. Effectof coumermycin concentrationonT7 DNA, RNA, and protein synthesis.Procedureswere asdescribedinthelegendtoFig.2. E.coliB/l was
irradiated with UVlight,and theindicatedamounts of coumermycinwereadded 3minpriortoinfection withT7phage.Control(0); coumermycinat3,g/ml (0); 10 pg/ml (A);30pg/ml(0); 1)00
jg/ml
(U).replication,itseemed possible that theinhibition
of late transcription bycoumermycin might be
asecondary effect resulting from the inhibition
of DNAsynthesis. Late transcription of T7 does
notnormally require DNA replication, but
abor-tive replication in the absence of DNA gyrase
might produce lesions in the DNA which inhibit
transcription. Itwastherefore of interest to
de-termine whether DNAsynthesis is required for
coumermycin inhibition of transcription. T7
pro-videsanexcellentsystemto testtherequirement
for DNA synthesis, since a number of phage
mutants are defective in DNA replication but
notintranscription. We measured the effect of
coumermycinonphagetranscription incells
in-fected with T7 gene 5 (DNA polymerase) and
gene 6 (exonuclease) mutants. The T7 DNA polymerase is required for all stages of phage
DNA replication. However, during infection
withaT7gene5mutant,theinhibitionof
tran-scription by coumermycinwas identicaltothat
observed duringawild-type infection (Fig. 5b).
The T7 exonuclease is not required for early
stages ofphage DNAreplication, but is
appar-ently required for the formation oflarge
repli-cativeintermnediates. As wil be discussedlater,
structures containing up to several hundred
phage equivalents of DNA (concatemers) are
formedduringreplication in normal infections.
Concatemersarenotfoundincellsinfectedwith
T7 gene 6 mutants (12). However, the gene 6 mutant infection exhibited a normal
coumer-mycin inhibition ofbothtranscription (Fig. 5c)
and DNA synthesis (data not shown). Thus,
coumermycin inhibition of transcription does
notrequireDNAsynthesis,whichsuggeststhat
DNA gyrase plays a directrole inphage RNA
synthesis. These data also indicate that DNA
gyraseisrequiredfor DNAand RNAsynthesis
even when large replicative intermediates are
not formed and when the template DNA
re-mains inunit-length linear molecules.
Coumermycin selectively inhibits the synthesis of late proteins. Since our studies
on the kinetics of phage RNA synthesis
sug-gested that late transcription is preferentially inhibited by coumermycin, itwasof interestto
determine the effect of the antibiotic on the patternsofprotein synthesisduringphage infec-tion. Although protein synthesis is not as
strongly inhibited by coumermycin as is DNA
or RNA synthesis, it seemed possiblethat the pattern ofprotein synthesismight be altered by the drug. For example, the synthesis of func-tionallate mRNAmightbecompletelyblocked by theantibiotic,andprotein synthesisobserved
at late times in the presence of coumermycin could represent residual translation of early mRNA.Alternatively,thetranscription ofsome
lategenescould beaffectedmorestrongly than
transcription of others. To examine these possi-bilities, we labeled T7 proteins with
"4C-amino
acidsatintervalsduring infection in thepresence
andabsence ofcoumermycin.Theproteinswere
then analyzed by electrophoresis in polyacryl-amide gels containing sodium dodecyl sulfate (Fig. 6).
Synthesis of T7 early proteins, the products
of genes which are transcribed by the E. coli
RNApolymeraseandareexpressedimmediately after infection (e.g., genes 0.7, 1, and 1.3), was notaffectedby coumermycin. Thissupports our
previous conclusion that transcription of the
earlygenesisinsensitivetothedrug. Incontrast,
synthesis of many ofthe late proteinswas
se-verely inhibited by coumermycin. However,not
all of the genes transcribed by the T7 RNA polymerase were affected equally by the anti-biotic. Theexpressionof theclassII genes 4, 5,
6, and HDP (helix destabilizing protein)
ap-peared to be relatively insensitive to
coumer-6 10- 10 -
-0 10 20 30 10 0 10 20 30 10 0 10 20 30 10
MINUTES
FIG. 5. Effect of coumermycin on RNA synthesis in cells infected with T7 gene 1, gene 5, or gene 6 amber mutants. E. coliB/i was irradiated with UV lightand infected with T7phage bearing an amber mutant in gene1 (a), gene 5 (b), or gene 6 (c), and the rate of RNA synthesis was measured at intervals afterinfection as described in the text. Control (0); 30 pgof coumermycin per ml (0).
J. VIROL.
on November 10, 2019 by guest
http://jvi.asm.org/
[image:4.505.57.251.60.169.2] [image:4.505.265.456.501.589.2]COUMERMYCIN INHIBITS T7 DNA AND RNA SYNTHESIS 533
2
4
6
8
10
12
14
16
18
_ + + 1- 4- z _ .i _44+ _ +
"Wo -16
. x
4b~~~ 41U1 ~~4qu -1WW
tsp~~~~~~~~~~lY
_;
-12ftair~~~~~~~~~~~~~~~~.*W --i.LI9;;
_P
S* ,S,
,.W
10
-10
-6
HDP
-FIG. 6. Polyacrylamide gel electrophoresis ofT7proteins synthesized in the presence or absence of
coumermycin. Procedureswereas describedby Studier(20,21). UV-irradiated E. coliB/l wasinfected with
T7phageatamultiplicity of 10 in M9 medium at30°C. At 2-min intervals 0.1-mi samples of the infected culture wereaddedto10 ,Llofamixturecontaining"4C-aminoacids (200X MCi/ml) and 1mgof unlabeled
arginineper ml.After 2 minat30°C,1mlof T brothwasaddedtoeachsample, and incubation continued for 4min. The cells were then collectedby centrifugation, suspended in 50 mM Tris (pH 6.8) containing 1%
mercaptoethanol, 1%sodiumdodecyl sulfate,and10%glycerol,incubatedfor2 minat100°C,andsubjected
toelectrophoresisinadiscontinuous sodiumdodecylsulfate-containing buffer systemon a10%polyacrylamide
slabgeL Radioactivityonthe driedgelwasvisualizedby autoradiography. The number at thetopofeach
track is the time(minutes) after infectionatwhich thepulseof '4C-aminoacidsbegan forthe control culture (-) andaculturecontaining50pgof coumermycinperml(+). The numberoftheT7genethatspecifieseach proteinasidentified by Studier (20; personalcommunication) is givenatthe sides. The helix-destabilizing protein (HDP) hasnotbeenassignedagenenumber.
mycin, whereastheexpressionofgenesnearthe
rightend of the T7genome (for example,genes
12, 15, 16, 17, and 19)wasseverelyinhibited.
Thus, T7geneexpressionexhibitsagradient
ofsensitivitytothe antibioticcoumermycin.The
expression of earlygenes,at theextreme left of
the T7genome,is insensitivetothedrug,while
the expressionofgenesat the right end of the
genome isseverelyinhibited. Theexpressionof
genes in the middle of the genomeexhibits
in-termediatelevels of inhibition.
DISCUSSION
E. coli DNA gyrase is required in vivo to
maintain acircular DNA inanunderwound or
negatively supercoiledstate.Thishas been
dem-onstratedforsuperinfecting phagelambda DNA
(5) and more recently for the folded bacterial
chromosome itself (3). Itseems likelythat the
negative supercoiling of a circular DNA may
provide an important driving force for DNA
replication, transcription,and recombination. It
has been shownthat in vitro such DNA
mole-culescanhybridizewithsingle-strandDNA
frag-ments to form the triple-stranded joint
com-monly postulatedas anintermediate in
recom-bination (7). Furthermore, site-specific
recom-bination ofphage lambda in vitro requires
su-perhelical DNA (13). Infact, DNA gyrasewas
first identified on the basis of its role in this
reaction (14). The transcriptionofanumber of
circular DNAsin vitro(2,16,24)has been shown
to be enhancedby superhelicity. Inreplication,
maintining the DNA in an underwound state
I
-5
-0.7
-1.3 -VOL. 29,1979
0 0
0
40
40
0
fe: 40.
40
ot: ...on November 10, 2019 by guest
http://jvi.asm.org/
[image:5.505.60.450.64.349.2]534 DE WYNGAERT AND HINKLE
would aid the necessaryunwindingatthe grow-ing fork. Inaddition, in the replication of 4X174 RFDNA,superhelicity has been shownto pro-motethe binding of the phage gene A protein, which isrequired to initiatereplication (10).
Thus DNA gyrase may wellplayanessential role in thereplication, transcription, and recom-bination of circular DNAs. Indeed, coumermy-cin,which inhibits DNA gyrase in vitro (5),also inhibits bacterial DNA replication and to a
lesser extenttranscriptionin vivo(17). However, it isless clear how DNA gyrase functions in T7 DNAreplicationandtranscription. The T7 ge-nome is a linear duplex DNA molecule, and duringatleast the first round ofreplicationthe DNA appears to remain in a linear structure
(25), with no obvious topological constraints. During subsequent rounds of replication the DNAisfound inlinear concatemers,containing up to 10phageequivalents of DNA, and then in much larger structures containing several hundredphage equivalents of DNA (4, 9, 15, 18, 19). Theselarge loopedstructuresappear similar
to the folded bacterial chromosome and the unwinding of this DNA may wellrequire topo-isomerasessuch asX (23) and DNA gyrase (5). Unwindingof this DNA doesnot appearto be constrained invitro,since the addition of ethid-ium bromide doesnotproduce supercoiledDNA (15).However,it seemsquitelikelythat in vivo theselarge replication structurescontain topo-logicallyisolated DNAloopsanalogoustothose found in the bacterial chromosome (25). Thus,
atleastduringthe later stages ofphagegrowth
itseemsreasonable thatphageDNAreplication
andtranscriptionwould be affectedbythe DNA gyrase inhibitor coumermycin. In fact, wefind thatphagenucleic acidsynthesisis less sensitive
tocoumermycin atearlytimes duringinfection than it isatlatertimeswhen thelarge replicative intermediates are formed. This is particularly
true of RNA synthesis, where only late tran-scriptionappearstobe inhibitedby coumermy-cin; but with DNA synthesis, which is more
completelyinhibited bythe antibiotic, wealso
see a smallamount ofsynthesis atearly times
(10 to 15min) even atvery highcoumermycin
concentrations (for example, Fig. 4). This sug-geststhat asmallamountofphageDNA repli-cationcan occur inthe absence of DNAgyrase activity. However, the formation oflarge
con-catenated DNAintermediates isapparentlynot
necessaryfor coumermycin inhibition of DNA
and RNAsynthesis. We foundanormal
inhibi-tion of both DNA synthesis (data not shown) and RNAsynthesis(Fig.5)duringinfectionwith
a T7 gene 6 amber mutant, although
concate-mers areapparentlynotformed duringthis
in-fection (12). Inaddition,a normalinhibition of
RNA synthesis was observed during infection with a T7 gene 5 mutant, where no DNA repli-cation is observed. Therefore DNA gyrase ap-pears tobe required for efficient phage nucleic acid synthesis even under conditionswhere large replicativeintermediates are not formed.
Consistent withthis, Itoh andTomizawa have shown thatcoumermycinblocks even the first round of T7 DNAreplication (8).During infec-tion in the presence of a density label, they found thatvery little of theinfecting DNA was converted to ahybriddensity in the presence of coumermycin, suggesting that DNA gyrase is required for efficient completion of the first round of T7 DNAreplication.
Since DNA gyrase is required for T7 DNA synthesis invivo, it is surprising that the enzyme is notrequired for DNAsynthesis in vitro. We have previouslyshown thatnalidixic acid, now known to be an inhibitor of DNA gyrase (22), hasessentiallynoeffect on the rate of T7 DNA synthesis in a cell-free system (6). More recently wehave also shown that coumermycin, at con-centrationsupto100,ug/ml, has no effect on T7 DNAsynthesis in vitro (D. Hinkle, unpublished data). Yet this cell-free system supports exten-sive DNAsynthesisand produces abiologically active product (11). Perhaps attachment of the DNA tothe cell membrane and/or polysomes in vivo produces topological constraints that are notpresent invitro. This may also explain why DNA gyrase is requiredforefficient transcrip-tion of thelate,butnottheearly, T7 genes, even in the absence of DNA synthesis. Immediately after infectionthe DNA is presumably relatively free of polyribosomes and other constraints, so that the limited unwinding of the DNA helix, which takes place during the binding of RNA polymerasetothe promoter and thesubsequent RNA synthesis, can occur in the absence of DNAgyraseactivity. As the infection proceeds, the constraints onthe unwinding ofthe DNA helixmay become moresevere, resulting in the observedgradient of coumermycin inhibition of T7proteinsynthesis (Fig. 6).Alternatively, the
T7 RNA polymerase may bind to and unwind
some T7promoters moreeasilythanothers,so
thatthe negative torque provided by DNA gy-rase stimulatesthe transcription of some genes more than others.
It will be interesting to determine whether DNAgyrase affectsthepatternoftranscription by the purifiedT7RNApolymerase.Inaddition,
as systems are developed forreplication of T7 DNAusingpurifiedproteins,the effect ofDNA
gyraseonreplicationcan be testeddirectly.
ACKNOWLEDGMENTS
WearegratefultoKarl Drlica formanyhelpfuldiscussions J. VIROL.
on November 10, 2019 by guest
http://jvi.asm.org/
INHIBITS T7 DNA AND RNA SYNTHESIS 535
andtoR.BruceStruthersforassistance with the computer graphics.
Thisinvestigationwassupported by Public Health Service grantGM-21782 from theNational Institute ofGeneral Med-icalSciences andby grant NP 179 from the American Cancer Society, Inc. M.D.W. issupportedby Public Health Service training grantGM-07102,and D.C.H. is arecipientof Public Health Service CareerProgram Award GM-00221, both from the National Institute of General Medical Sciences.
LITERATURE CITED
1. Baird,J.P., G.J.Bourguignon, and R.Sternglan. 1972. Effect ofnalidixic acid on the growth of DNA bacteriophages. J. Virol. 9:17-21.
2. Botchan,P.,J.C. Wang,and H.Echols.1973.Effect ofcircularityandsuperhelicity ontranscriptionfrom bacteriophageADNA.Proc.Natl.Acad.Sci. U.S.A.70: 3077-3081.
3. Drlica, K., andM. Snyder. 1978. Superhelical Esche-richia coli DNA:Relaxationby coumermycin. J.Mol. Biol. 120:145-154.
4. Frolich, B., A. Powling, andR.Knippers.1975. For-mationof concatemericDNA inbacteriophage T7-in-fected bacteria.Virology65:455-468.
5. Gellert, M.,M. H.O'Dea,T.Itoh,andJ.-I. Tomizawa. 1976. Novobiocinandcoumermycin inhibit DNA su-percoiling catalyzed byDNA gyrase. Proc.Natl. Acad. Sci.U.S.A.73:4474-4478.
6. Hinkle,D.C., and C. C.Richardson. 1974. Bacterio-phage T7 deoxyribonucleic acid replication in vitro: requirementsfordeoxyribonucleicacidsynthesis and characterization of the product.J. Biol. Chem. 249: 2974-2984.
7. Holloman, W.K.,R.Wiegand, C. Hoessli,andC.M. Radding.1975.Uptakeofhomologous single-stranded fragmentsby superhelicalDNA: apossiblemechanism for initiation of general recombination. Proc. Natl. Acad.Sci. U.S.A.72:2394-2398.
8. Itoh,T., andJ.-I.Tomizawa.1977.Involvementof DNA gyrase inbacteriophage T7 DNAreplication. Nature (London)270:78-79.
9. Kelly,T.J.,andC. A. Thomas.1969.Anintermediate in thereplicationofbacteriophage T7 DNA molecules. J. Mol.Biol.44:459-475.
10. Marians, K.J., J.-E. Ikeda, S. Schlagman, and J. Hurwitz.1977.Role of DNAgyraseinOX replicative-formreplicationin vitro. Proc. Natl. Acad.Sci.U.S.A. 74:1965-1968.
11. Masker,W.E.,andC. C.Richardson. 1976. Bacterio-phageT7deoxyribonucleicacidreplicationin vitro.VI.
Synthesis of biologicallyactive T7 DNA. J.Mol.Biol. 100:557-567.
12.Miller, R. C., Jr., M. Lee, D. G. Scraba, andV. Paet-kau.1976.TheroleofbacteriophageT7endonuclease (gene 6) in geneticrecombination and production of concatemers. J. Mol. Biol. 101:223-234.
13.Mizuuchi, K., M. Gellert, and H. A. Nash. 1978. In-volvement of supertwisted DNA in integrative recom-bination ofbacteriophage lambda. J.Mol. Biol. 121: 375-392.
14.Nash, H. A. 1975. Integrative recombination of bacterio-phage lambda DNA in vitro. Proc. Natl. Acad. Sci. U.S.A.72:1072-1076.
15. Paetkau, V., L.Langman,R. Bradley, D.Scraba, and R.C. Miller, Jr.1977.Folded,concatenated genomes asreplication intermediatesof bacteriophage T7 DNA. J.Virol. 22:130-141.
16. Richardson, J. P. 1975. Initiationoftranscription by EscherichiacoliRNApolymerasefromsupercoiledand non-supercoiled bacteriophagePM2 DNA. J. Mol. Biol. 91:477-487.
17. Ryan,M.J.1976.CoumermycinAl:apreferential inhib-itorofreplicativeDNA synthesis inEscherichia coli. In vivo characterization. Biochemistry 15:3769-3777. 18. Serwer, P. 1974. Fast sedimenting bacteriophage T7
DNA from T7-infectedE. coli.Virology59:70-88. 19.Stratling,W., E.Krause,and R. Knippers. 1973. Fast
sedimentingdeoxyribonucleic acid inbacteriophage T7-infectedcells. Virology 51:109-119.
20.Studier, F. W. 1972. Bacteriophage T7. Science 176: 367-376.
21. Studier,F. W. 1973.AnalysisofbacteriophageT7early RNAs and proteins on slab gels. J. Mol. Biol. 79: 237-248.
22. Sugino,A., C. LPeebles,K. N.Kreuzer, andN.R. Cozzarelli.1977.Mechanism ofaction of nalidixic acid: purificationofEscherichiacoli nal A geneproductand its relationship to DNAgyraseand anovel nicking-closing enzyme. Proc. Natl. Acad. Sci. U.S.A. 74: 4767-4771.
23. Wang, J.1971.Interaction between DNA and an Esche-richia coliproteinw.J.Mol. Biol.55:523-533. 24.Wang,J.C. 1974.Interactions betweentwisted DNA's
andenzymes: the effects ofsuperhelical turns.J.Mol. Biol.87:797-816.
25.Wolfson,J.D., D.Dressler,and M. Magazin. 1971. BacteriophageT7 DNAreplication:alinearreplicating intermediate. Proc.Natl.Acad. Sci. U.S.A.69:499-504. 26.Worcel, A., and E. Burgi.1972.On thestructureof the folded chromosome ofE.coli.J.Mol. Biol.71:127-147. VOL. 29,1979
on November 10, 2019 by guest
http://jvi.asm.org/