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An affinity-structure database of helix-turn-helix: DNA complexes with a universal coordinate system

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Academic year: 2019

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Figure

Fig. 1 Database creation steps. Protein-DNA structures and position weight matrices (PWMs) were first curated from existing databasesand the primary literature
Fig. 2 Curation of protein-DNA structures. a End-to-end process for curating protein-DNA structures
Table 2 Structural families used as target queries to retrieve HTH-DNA structures. Indented rows indicate sub-fields, and multiplecolumns under “Setting” indicate a hierarchical choice
Fig. 3 Statistical distribution of HTH structural properties. All histograms show distribution over HTH domains in our database
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