Copyright © 1970 AmericanSociety for Microbiology Printed InU.S.A.
Characterization of Bluetongue
Virus
Ribonucleic Acid
D. W.VERWOERD, H. LOUW,AND R. A. OELLERMANN
MolecularBiology Section, Veterinary Research Institute, Onderstepoort, South Africa
Receivedfor publication 2 September 1969
Animproved purificationprocedureyieldedbluetongue virus free from any
single-stranded ribonucleic acid (RNA) component. Double-stranded RNA obtained
frompurified virus or isolatedfrom infected cells was fractionated into 5 compo-nents by means ofsucrose gradient sedimentation analysis, and into 10 compo-nentsbyelectrophoresisonpolyacrylamidegels. The size of these components vary from 0.5 X 106to 2.8 x 106daltons,with atotal molecular weight estimate of about 1.5 x 107 forthe viralnucleic acid. Thedenaturationof thegenome and separation of theresulting fragments are also discussed.
A striking similarity has been found between
the nucleic acid moieties of bluetongue virus (BTV) and reovirus, although the virions differ
insize andmorphology. Bothgenomesconsist of double-stranded ribonucleic acid (RNA) which
has been found, after isolation, to consist of a
number of segments ofreproducible size. In the case of reovirus, the presence of 10 double-strandedsegments was demonstrated in fraction-ation experiments utilizing polyacrylamide gel electrophoresis (12, 20),whereaselectron
micros-copy studies using the Kleinschmidt technique indicated 9 to 11 fragments (15). In addition, a
single-stranded,
adenine-rich component hasbeenfound (1,
11).
Previous studies on BTV-RNA indicated the presenceofatleast threesizegroupsofsegments,
by theuseof sucrosegradient sedimentationfor
fractionation (16).
Inthe
experiments reported here,
the presenceor absenceofa
single-stranded
RNAcomponent inBTVwasinvestigated,and thedouble-stranded viral RNA wassubjected
tofurtherpurification
and characterization.
MATERIALS AND METHODS
Buffers. The STE buffer consisted of 0.1 M NaCl,
0.005Mtris(hydroxymethyl)aminomethane (Tris),and 0.001 Methylenediaminetetraacetic acid (EDTA), pH
7.4; the SSC buffer consisted of 0.15 M NaCl and
0.015 M sodium citrate, pH 7.2.
Virus.BTVserotype 10has been usedthroughout
this work. Methods for the production of virus in
BHK-21 cellcultures and forplaquetitrations in
L-cells have been described (4).
Reovirus type 1 wasobtained fromN. F. Stanley,
Melbourne, Australia; grown in BHK-21 cells, and
purified according to the method of Bellamy et al.
(1).
Purification of BTV. The following modifications
have been introduced into the procedure described
previously (16). After extractionwith Tween 80 and
ether, sucrose was added to the aqueous phase
con-tainingthevirus toafinal concentrationofabout4%,
and the salt concentration was adjusted to 0.1 M. It
wasthen layered over 2ml ofa40% sucrosesolution
in STE, and the viruswaspelletedthrough thislayer
for2hrat102,000X g.Thepelletsweredissolved in
asmall volume of 0.002 MTris-hydrochloride atpH
8.0 and finally purified by centrifugation through a
10 to 30% sucrose gradient in the same buffer at
78,000 X g for 70 min. Thesemodifications arebased
ontheobservation thatpurifiedBTVformaggregates
in0.1Mbuffer,withdisaggregationat asalt
concentra-tion of 0.002 M. Gradients were fractionated in a
model D fractionator (Instrumentation Specialties
Co., Inc., Lincoln, Neb.) and assayed for virus
ac-tivity by meansof plaque titrations;thefractions
con-tainingviruswerepooled for phenol extractionorfor pelleting ofthe virus ifrequired.
Phenol extraction. The procedure described by
Scherrer andDarnell (10) wasfollowed forthe
isola-tion of RNA from infected cells. In the case of
purified virus, the pooled fractions were dialyzed
against STEbuffer, and sodium dodecyl sulfate was
added to a concentration of 1%. Deproteinization
withphenolwascarried out atpH 7.4 atroom
tem-perature.
Isolation of double-stranded BTv-RNA from
in-fected cells. Cells were harvested about 20 hr after
infection andwerecollected bylow-speed
centrifuga-tion. A cytoplasmic extract was prepared according
to the methodofBellamy et al. (1), and theextract
wasdeproteinizedwithphenol.Afterprecipitationof
thetotal RNA withtwovolumes of coldethylalcohol,
transfer and double-stranded RNA were selectively
dissolved in 1 M NaCl. After dialysis against STE,
the double-stranded RNA was finally purified by
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meansofchromatography on a methylated albumin-kieselguhr (MAK) column (18). The double-stranded
RNA peak, eluted at 0.7M in the NaCl gradient, was
pooled, precipitated overnight in two volumes of cold ethyl alcohol, and dissolved in 0.1 X SSC.
MAKcolumn chromatography. MAKcolumns were
preparedaccording to thesimplified method described
by Osawa and Sibatani (9). Elution wascarried out
withalineargradient of 0.2 to 1.2 M NaClbufferedto
pH 6.7 with Tris-hydrochloride.
Density gradient sedimentation analysis. Purified
viruswasdisruptedby theadditionof0.5 M ureaand
0.1 Msodium acetate, and its RNA wasanalyzed in
sucrose density gradients containing 0.1% sodium
dodecyl sulfate (SDS) by the method of Bellamy et al. (1).
Analysis of isolated RNA was carried out in
gradients prepared from ribonuclease-free sucrosein
STEbuffer containing0.025 M EDTA.Centrifugation wasroutinely carriedoutfor5 hrat200,000 X gin
aSpinco SW50rotor. Gradientswerefractionated in
anIsco model D gradient fractionator.
Polyacrylamide gelelectrophoresis. Electrophoresis
onpolyacrylamidegelswascarriedoutbythemethod ofLoening(7), with themodificationthat0.1%SDS
wasadded to thebufferandethylenediacrylate(0.2%),
wasused ascross-linkingagent. Gels(3%), prepared
in SDS-containingLoening's buffer, were used
rou-tinely, andseparationwasnormallyfor 4hr, at100v
in 10-cm gelsat roomtemperature. Thesamebuffer
wasused in the electrode chambers. To resolve the
high-molecular-weight components, the gel
concen-tration was increased to 3.6% and the time was
extended to 7hr. Gelswere cutinto 1-or2-mmslices
asrequired, dissolvedin 0.2 ml of1Mpiperidine, and
counted inKinard's (6) scintillator solution.
Thermal denaturation. Melting curves were
deter-mined by heating the samples in theheating
attach-ment of a DK-2A spectrophotometer (Beckman
Instruments Co., Inc., Fullerton, Calif.) in
glass-stopperedcuvettes.
Radioactive precursors.The
'4C-uridine,
3H-uridineand 32P, asorthophosphate, were obtainedfromthe
Radiochemical Centre, Amersham, England.
Radioactivity assays. All determinations of radio-activity were made by scintillation counting in a
Packard Tri-Carb liquid scintillation spectrometer
(Packard InstrumentCo., Inc.,DownersGrove, Ill.).
Aqueoussamples were counted inBray's scintillator
(2) and gel slices in Kinard's solution (6). The 32p_
containing sampleswerecountedwithoutscintillator, utilizing Cerenkov radiation.
RESULTS
Purity of the isolated virus. Earlier studies
pro-vided evidence for a
single-stranded
RNAcom-ponent present invaryingamountsinthe
double-stranded RNA preparations isolated from puri-fiedBTV(16).Thesimilarity ofthe BTVgenome to that ofreovirus naturally led to the specula-tionthat this componentmight be equivalent to the single-stranded,
adenine-rich,
2S material reported in reovirus (1, 11). Theirregularity
ofthe amount present in various preparations,
however, indicated the possibility of this compo-nent being a contaminant. Subsequent modifica-tion of the purification procedure (see Materials and Methods) resulted in many preparations containing no single-stranded RNA, thus strengthening this view. The possibility still existed, however, that such a low-molecular-weight fragment could have been lost during the
isolationofviralRNA. The fact that 3H-uridine was normally used for labeling viral RNA might have been a contributory factor in view of its low concentration in the adenine-rich compo-nent. To resolve this question, it was decided to label BTV with 32p and to liberate the RNA from purified virus directly onto sucrose gradients.
Although the modified purification procedure resulted in better yields of virus with a higher degree ofpurity, two virus bands were still com-monly encountered inthe sucrosegradients
con-stituting the final purification step. After 32p_ labeling and purification, the two bands were collected separately, the viruswas solubilized by
adding urea and sodium acetate, and the RNA was fractionated by centrifugation in 15to 30%
sucrose gradients containing 0.1% SDS (1).
Results are shown inFig. 1. Band B, the
faster-sedimenting band always present, contained only high-molecular-weight material equivalent
to the 8 to 165, double-stranded components
previously demonstrated. Band A, which was
absent in some experiments and presentin
vari-10.
C.~
5.
o10 15 20
Fractionnumber
FIG. 1. Sucrose density gradient sedimentation
analysisoffractionsAandBobtainedduring
purifica-tion of 32P-labeled BTV. Virus was solubilized with
ureaandacetateandlayered directly onto 15to30% ribonuclease-free sucrose gradients in STE buffer.
Gradients were centrifuged for 5 hr at 200,000 X g
and
fractioilated
as described; the total number ofcountsin eachfractionwasdetermined.Sedimentation
isfrom left to right. The positions of
14C-uridine-labeled ribosomal RNAfrom BHK-21 cells, addedas
markers, are indicated by arrows. Symbols: 0,
fraction A; *,fractionB.
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[image:2.490.260.452.409.536.2]able amounts in others, contained, in addition,
some ribonuclease-sensitive material in the 2 to
45 region. This material was not available in
sufficientquantities to allow a base analysis. Various tests were performed onthe two frac-tions to exclude the possibility that the second
band represented contamination with another related virus or serotype of BTV and to see whether any characteristic difference could be found which would explain the presence of two bands.
Negativelystained preparationsexamined in an electronmicroscopedid not reveal any
morpho-logical difference. Both bands contained similar numbers of empty and fullparticles.
Antiserawere produced againstboth A and B
virusin rabbits, and complement fixation as well as cross-neutralization tests were performed as
previously described (3). The same single BTV type 10-specific antibody was found in the
anti-serum, and no neutralization of other serotypes could be demonstrated (P. G. Howell, personal communication).
RNA isolated from both fractions was
frac-tionated on a MAK column and by
polyacryla-mide gel electrophoresis. No difference between A and B could be detected by either method. Both preparations eluted from the MAK column at asaltconcentrationof 0.68 to 0.7M, and both yielded the standard electrophoretic pattern for
double-stranded RNA shown in Fig. 3. Other data collected during this investigation are
sum-marized inTable 1.
Itisobvious thatthemaindifferences between
the twobands arethevariation in buoyant den-sity,theconsiderably higher specific infectivity of
the faster-sedimenting B band, and a large
TABLE 1. Comparative data obtained for bands A
andBfound during purification ofBTVby
zonalcentrifugation in sucrosegradients
Characteristic Band A Band B
Approximate
sedimen-tation constanta... 520 S 750 S Buoyant
densityb...
1.39 1.38Specific radioactivityc... 7,620 8, 500 Specific
infectivityd
... 2.1 X 109 4.0 X 10'°aCalculated according to the method of
Mc-Ewen (8).
bDeterminedbymeansofequilibrium
centrifu-gationin CsCl density gradients.
cExpressed as counts per minute per absorbancy
unit at260nmn.
dExpressed as plaque-forming units per milli-liter perabsorbancy unit at 260 nm, determined by
theplaque assaypreviouslydescribed (16).
difference in sedimentation velocity. The dif-ferences indensity and specific infectivity are com-patiblewith the evidence that the A band contains some additional low-molecular-weight RNA, as
revealed by density gradient sedimentation anal-ysis. It is more difficult to explain the difference in sedimentation value. One can only speculatethat the RNA contaminant might be "tailing" from the spherical virus particles, causing a consider-able increase of the frictional coefficient.
Intheabsence of any evidence to the contrary, it is concluded that band B represents purified virusfree from the single-stranded, 2 to4S RNA componentfound inprevious preparations,which represents acontamination and forms no essential partof the BTV genome.
Fractionation of double-stranded RNA by sedi-mentation in sucrose gradients. The fractionation of the BTVgenomeinto fragments of three size groups by means of sucrose gradient sedimenta-tion analysishas been described (16). The
resolu-tion obtained, however, was never asgood as in the case of the reovirus genome (12, 20). In an attempt to improve the resolution by extended
centrifugation and by collection ofsmaller
frac-tions, itwasfound thatthe lossofresolutionwas
causedby thepresenceofmore than threepeaks. These peaks could be partly resolved by using the
improved technique mentioned.Thefractionation pattern obtained isillustratedin Fig. 2. The pat-tern obtained with reovirus RNA isincludedfor
E
(.1
Fraction number
FIG. 2. Fractionation pattern of BTV-RNA on
sucrosegradientscomparedtothatobtainedfor reovirus RNA. Both viruses were labeled with 14C-uridine
(specificactivity, 510mc/mr)at afinalconcentration
of0.01juc/ml. BTVwaspurifiedasdescribed. Reovirus
was purified by the method of Bellamy et al. (1).
Both viruspreparations weresolubilized withureaand
acetate, and the liberated RNA wasfractionated in
sucrose gradientsasdescribedin thelegendtoFig. 1.
Sedimentation valueswerecalculatedfrom the relative
positionsofcellular RNA markers indicatedinFig. 1.
Symbols: 0, BTV; *, reovirus.
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[image:3.490.246.443.397.538.2] [image:3.490.44.238.456.614.2]comparison. Five peaks are resolved with ap-proximate sedimentationconstantsof 8.5, 10, 12, 14, and 15.5S. Sedimentation values are based on
thesedimentation rates of cellular transfer RNA and18Sribosomal RNA, preparedfrom BHK-21
cells and added as markers. Calculated on the
basisof therelationshipS = 0.0882 X molecular
weight'-306,
deduced by Studier fordouble-stranded DNA (14), these sedimentation con-stants correspondto values of 0.5 X 106, 0.8 X
106, 1.5 X 106, 2.3 X 106,and 3.0 X 106daltons, respectively, for the molecular weights of the
fragments.
Polyacrylamide gel electrophoresis of the BTV genome. Tritium-labeled, double-stranded RNA isolated from purified BTV was resolved into 10 componentsby means ofelectrophoresis in3.6%
polyacrylamide gels. These components,
num-bered 1to 10,areshowninFig. 3.The fractiona-tion pattern is similar, but not identical, to that obtained forreovirus (12). The 10 peaks are not as clearly groupedinto threesizecategories as in
the case ofreovirus, mainly because the largest and smallest components, possessing the lowest and highest rates ofmigration, respectively, are
well separated from their neighbors. The general impressiongiven by thepattern isagroupinginto fivecategories rather thanthree.This would cor-relatewellwith theseparation of BTV-RNA into fivecomponentsinsucrosegradients.
To obtain a more detailed
comparison
of the migrationrates ofthe components derived from reovirus andBTV, tritium-labeledRNA derived from bothwere fractionated understrictly
iden-Fraction number
FIG. 3. Fractionation of double-stranded RNA
derivedfromtritium-labeledBTVbymeansof
electro-phoresisin3.6%polyacrylamidegelscontaining0.1%
SDS. Virus was labeled with 3H-uridine (specific
activity, 1.5 c/mM) at a final concentration of 1.0
c/ml.
Migration
isfrom left
toright. Electrophoresis
wascarriedoutfor7hrat25 Cat a voltage gradient of
IOv/cm. Gelswere cut into 1-mm slices.
tical conditions. Electrophoresis was carried out in3 % gels,10 cm long, for 4 hr at 10 v/cm.Under these conditions, reovirus RNA is separatedinto five components only, the first two peaks
cor-responding to the unresolved large and medium
size groups, the small group being resolved into three components. The BTV-RNA pattern, in contrast, is resolved into nine componentswhich
areclearly discerniblein Fig. 4.
The double-stranded RNA from reovirus has
been reasonably wellcharacterized, and the mo-lecular weights of the main components have been determined by several authors. Therefore, the
average molecular weights (1, 12, 19) of the five
peaks resolved in Fig. 4A (2.5 X 106, 1.4 X 106, 0.92 X 106,0.76 X 106, and 0.63 X 106 daltons,
respectively) were plotted against the distances they migrated to obtain a reference curve. A
linearrelationship was obtained (Fig. 5). Themolecular weights of the BTV-RNA com-ponents in Fig. 4B were then determined from
Fractionnumber
FIG. 4. Comparison of the electrophoretic patterns of (A) reovirus RNA and (B) BTV-RNA. Purified
tritium-labeled virus was solubilized with urea and
acetate and layered directly onto 3% gels containing
SDS. Timefor separation was5 hr; otherwise,
condi-tions werethesame asfor Fig. 3.
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[image:4.490.60.451.299.588.2]this plot on the basis of their relative
electro-phoreticmobilities. The values thus obtained for peaks 1to10areshown in Table 2. Asafurther test for the validity of these figures, an analysis was made of the distribution of radioactivity
among thepeaks in Fig. 3. The total countsper
minute for all peaks was divided by the total
estimated molecular weight of 1.5 x 107,and the
resultantfigure was multiplied by the estimated
molecular weight of each peak to obtain the estimatedcountsperminute for that peak. These
valuesarecompared with the observedcountsper
minute in Table 2. The good agreement between estimated and observed countssuggests that the molecular weight figuresarereasonablyaccurate.
Melting behavior. Identical thermal denatura-tion curves were obtained with the
double-stranded RNAisolated from highlypurified BTV and with that isolated from infected cells. The firstdenaturationstepobserved in previous
prepa-.l
3:
to
75 ixio1
u
0
5X105
2 3 4 5 6 7 8
Distance migrated (cm)
Fio. 5. Relationship between molecular weight of
reovirus type I components and their electrophoretic
mobility in 3% gels.
TABLE2. Molecular weight of, anddistribution of
radioactivity in, the electrophoretic components
of BTV-RNA inFig.4B
Distance Estimated Estimated Observed Peak mit(mm) molecular weight counts/mina counts/min
1 27.0 2.8 X 10* 3,320 3,760
2
332.
2.2
X 106 5,460 5,4903 32.0 2.4 X 106
4 42.0 1.7 X 106 2,020 1,920
5 46.0 1.5 X 106 1,780 1,700
6 48.0 1.4 X 106 1,660 1,510
7 63.5 0.90 X 106 1,060 1,040
8 67.0 0.80 X 106 950 910
9 69.5 0.74 X 106 880 860
10 83.0 0.49 X 106 580 620
aForcalculation, seetext.
rations (16) was no longer present. As expected,
Tm values were dependent on theionic strength andpH of thesolution (Table 3).Aninteresting observation wasthe effectof Trisonthe melting point of the RNA. At all concentrations, the sample in the Tris buffer had a Tm value about
4Chigher thanthat of an equivalent sample in SSC. As all buffers were preparedwith deionized
water, this phenomenon cannot be explained in terms of divalentions forming complexeswith the citrate-containing SSC. The absolute Tm values
varied withina rangeof about 2 C in different
ex-periments. Toensurecomparibilityof the data in Table 3, one RNA preparation was used, after
dilution
in thevarious buffers, for alldetermina-tions. The Tmvaluesin SSC arefairly similar to thosereportedforreovirusRNA atdifferentionic strengths (1). The hyperchromic increase after melting also showed some variation reflecting the degreeof purity ofthe preparation, but was
usually about 30to36%.
Rapid coolingin anice bath afterdenaturation invariably led to about 50% renaturation, as
judged by the decrease in absorption (Table 3).
Asecond cycle ofthermal denaturation resulted inreversible melting at a much lowertemperature ofabout 40to60C,
indicating
thatthis decrease inabsorptiononcoolingrepresents thefoldingofthe single strands and is not true renaturation (Fig. 6).
Denaturationwithchemicalagents. Attempts to
fractionate the single-stranded components, ob-tained by thermal denaturation, by means of sucrose
density
gradient sedimentation orpoly-TABLE 3. Thermaldenaturation dataforBTVt-RNA
in variousbuffersof different ionicstrength
andpH values
Per cent hyperchromicity Buffer Concn pH Tm
After After
melting cotling
inice
SSC... 0.165 7.4 95.0 33.0 17.0
Tris/hydro-chloride... 0.2 7.4 99.0 34.0 18.0
0.1 X SSC... 0.0165 7.4 80.0 30.0 16.0
Tris/hydro-chloride... 0.02 7.4 83.5 36.0 19.0
0.01 X SSC.... 0.00165 7.4 74.0 34.0 18.0
0.01 X SSCa... 7.4 58.0 46.0 45.0
Tris/hydro-chloride... 0.002 7.2 78.5 34.0 18.0
Tris/hydro-chloride.... 0.002 9.0 75.0 38.0 23.0
aPlus8%formaldehyde.
5
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[image:5.490.39.233.292.431.2] [image:5.490.43.440.420.645.2]acrylamide gel electrophoresis invariably failed due to partial degradation of the single strands.
Various chemical agents have been employed by other workers to reduce the temperature of
de-naturation, such as formamide, formaldehyde, and dimethyl sulfoxide (DMSO). DMSO has
been used extensively for the denaturation of reovirus RNA (1, 5, 19). Under identical
condi-tions, however, denaturation of both BTV-RNA andreovirusRNA wasusually incomplete inour
hands,and partialrenaturationwasencountered
afterprecipitationof thedenaturedmaterialfrom theDMSO. Therefore, no satisfactory fractional
tion pattern could be obtained after DMSO
treatment.
Formaldehyde at a concentration of 8%
in-duced completedenaturationat atemperatureof
60Cand anionic strength of 0.002 M. No
degra-dation and no folding ofthe single strandswere
encounteredafterformaldehydetreatment.
Frac-tionation of the denatured material by sucrose
gradient sedimentation yieldedthepattern shown in Fig. 7, in which it is compared with that of
normal double-stranded RNA. Approximate S
values for the single-stranded RNA fragments
are11.0, 13.0, 16.5, 19.5, and 22.5,
corresponding
to molecular weights of0.24 x 106, 0.34 x 106, 0.56 X 106,0.8 X 106,and 1.1 X 106,respectively, according to the empirical relation molecular
weight=1,150X S2 lderivedbySpirin (13).These
valuesareallslightlyless thanhalf ofthe
equiva-lent molecular weights derived for the
double-strandedfragments. This
discrepancy
isprobably caused by the absence ofsecondary structure in the denatured strands due to the formaldehyde treatment, which would tend to lower thesedi-mentationrates. Noseparation of
[image:6.490.259.457.73.220.2]formaldehyde-0c
FIG. 6. Thermaldenaturationprofile of BTV-RNA.
The RNAsample, in0.02m Tris-hydrochloride buffer
at pH 7.2, was heated to 98 C, cooledquickly by
immersion inasalt-icebath,heated againto60 C, and
allowedtocooldown, recording theabsorptionat260
nmat regular intervals.
Dv _v iv . ,,
Fraction4r.
FIG. 7. Sucrose gradient sedimentation analysis of
nativeandformaldehyde denatured BTV-RNA.Samples
werecentrifugedat200,000 X g for S hr in 15to30%
gradients of ribonuclease-free sucrose. Symbols: 0,
untreateddouble-strandedRNA; @,samepreparation
of RNA after heating for 10 min at 60 C in 0.01 X SSC buffer containing 8%formaldehyde.
denatured fragments could be obtained by gel
electrophoresis under our standard conditions.
DISCUSSION
The basic principle of construction of the
double-stranded RNA genomes of BTV and
reo-virus isobviously very similar, but there are some finer points of distinction. The single-stranded
component found in partly purified BTV, and thought to be equivalent to the adenine-rich com-ponentof reovirus, was shown to be absent from
highly purified BTV. Further work isneeded to ascertain whether the presence or absence of a
single-strinded componentconstitutesa real dif-ferencebetween thetwo viruses.
Fractionationof the double-stranded RNAby
means ofpolyacrylamide gel electrophoresis re-veals the presenceoftensegments in the genomes of both viruses. Differences in theelectrophoretic patterns, reflecting differences in electrophoretic
mobilities of thecomponentsconcerned, indicate slight variations in the molecular sizes of the segments. Because of thereproducible variations
in the electrophoretic patterns obtained for dif-ferentserotypes of reovirus(12),itisperhaps not
surprising that the serologically unrelated BT
virusandreovirusarestillmoredissimilarin this respect.
Thedifferent sizedistributionof the segments is
also reflected in the patterns of separation
ob-tainedinsucrosegradientsedimentation analysis.
Incontrasttothedistinctdistribution of
compo-nents into three size categories in the case of
reovirus, five poorly resolvedpeaksarefoundfor
BTV. This
reproducible
poorresolution ofBTV-RNAonsucrosegradientsthrows some doubt on
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[image:6.490.57.250.462.599.2]the accuracy of the molecular-weight estimations
derived by comparison with ribosomal RNA markers. However, molecularweights determined from gels by comparison of the electrophoretic mohilities of BTV components with those of reovirus segments agree closely with the values obtained by sedimentation analysis. The values are also consistent with thedistribution of radio-activity among the peaks. The molecular weight estimates for components 1 to 10given in Table 2 can therefore be accepted with reasonable con-fidence.
A comparison of the molecular-weight esti-mates for BTV-RNA components obtained by the 2 methods moreover clearlyreveals a
correla-tion between the 5 peaks resolved in sedimenta-tion analysis and the 10 components resolved in gel electrophoresis. The 15.5S peak obviously
corresponds to component 1, the 14S peak to
components 2 and 3, 12S to 4, 5, and 6, 10S to
7, 8and 9,and 8.5S to component 10.
The significance of the segmented structure of the genomes of the double-stranded RNA viruses
remains to be elucidated. It does seem to be a
common characteristic of this viral group, how-ever, although it is not yet clear whether the
segmentationis a result of theisolationprocedure. African horsesickness virus also has recently been shown to possess a similar double-stranded ge-nome, separable into at least six components by gel electrophoresis (R. A. Oellermann et al., in
press). The fact that other viruses of animal,
plant, andinsecthosts arenowknown to possess asimilarstructureand to belong to alarge group
of related viruses (17) adds new interest to the
investigation of the biological functions of the
various partsofsuch acomplex genome.
ACKNOWLEDGMENTS
We thank J.H. Broekmnan and P. A. M. Wegeforexcellent
technicalassistance, P.G. Howell forassistance with the
sero-logicaltests,and theDepartment ofAgricultural Technical
Serv-icesfor thefacilities provided.
LITERATURE CITED
1. Bellamy,A.R., L. Shapiro, J.T.August,and W.K.Joklik. 1967. StudiesonseovirusRNA.I.Characterizationof
reo-virusgenome RNA. J. Mol.Biol. 29:1-17.
2. Bray, G. A. 1960. A simple efficient liquid scintillator for
countingaqueoussolutionsin a liquidscintillationcounter. Anal.Biochem. 1:279-285.
3. Howell, P. G. 1960. Apreliminary antigenic classificationof strains of bluetongue virus. Onderstepoort J. Vet. Res.
28:357-363.
4. Howell, P. G., D. W. Verwoerd, and R. A. Oellermann. 1967. Plaque formation by bluetongue virus. Onderstepoort J.Vet.Res.34:317-332.
5.Katz, L., and S. Penman. 1966. Thesolventdenaturation of double-strandedRNAfrompoliovirus-infected Hela cells.
Biochem.Biophys. Res. Commun. 23:557-560.
6. Kinard, F. E. 1957. Liquid scintillator for the analysis of tritium in water. Rev. Sci. Instr.28:293-297.
7. Loening, U. E. 1967. The fractionation of high molecular
weight RNA by polyacrylamide gel electrophoresis.
Bio-chem.J.102:251-257.
8. McEwen, C. R. 1967. Tables for estimating sedimentation
through linear concentrationgradients ofsucrosesolution.
Anal. Biochem.20:114-149.
9. Osawa, S.,and A.Sibatani. 1967. Chromatographic
separa-tion ofRNAfromDNA on MAKcolumns,p.678-684.
In S. P. Colowick and N.0. Kaplan (ed.), Methodsin
enzymology, vol. 3, part A. Academic Press Inc., New
York.
10. Scherrer, K., and J. E.Darnell. 1962. Sedimentation
charac-teristics of rapidly labeledRNAfrom HeLacells.Biochem. Biophys.Res.Commun.7:486-490.
11. Shatkin, A. J., and J. D. Sipe. 1968. Single stranded,
ade-nine-rich RNA frompurified reoviruses.Proc. Nat. Acad.
Sci. U.S.A. 59:246-253.
12.Shatkin, A. J., J. D. Sipe, and P. Loh. 1968.Separation of tenreovirusgenomesegmentsby polyacrylamidegel
elec-trophoresis.J. Virol.2:986-991.
13. Spisin, A. S. 1963. Some problems concerming the macro-molecular structureof ribonucleic acids. Progr.Nucl.Acid
Res.Mol. Biol.1:301-345.
14. Studier, F. W. 1965. Sedimentation studies of the sizeand
shape of DNA. J.Mol.Biol. 11:373-390.
15.Vasquez, C.,and A.K.Kleinschmidt. 1968. Electron
micros-copy ofRNA strands released from individual reovirus particles. J.Mol.Biol.34:137-147.
16. Verwoerd, D.W. 1969. Putificationandcharacterization of bluetonguevirus.Virology38:203-212.
17. Verwoexd,D. W. 1970. Diplornaviruses:anewly recognised
group ofdouble-strandedRNAvirus.Progressinmedical virology,vol.12.S.Karger,Publishers, Basel, Switzerland. 18. Verwoerd, D. W., andH.Huismans. 1969. On the relation-ship between bluetongue, African horsesicknessand
reo-viruses: hybridization studies.OnderstepoortJ. Vet. Res. 36:185-190.
19.Watanabe, Y., and A. F. Graham. 1967. Structural units of reovirus ribonucleic acid and theirpossible functional sig-nificance. J. Virol. 1:665-677.
20. Watanabe,Y., S.Millward,and A. F. Graham.1968. Regu-lation oftranscription of the reovirus genome. J. Mol. Biol.36:107-123.