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A104 Biology Problem 1

6

th

Presentation-Part 1

Cell Counting

Activity owner: Cindy Chua and Zheng Yuanli Approved by: Dr. Esther Chng

Module Chair: Cherry Chan

(2)

In Today’s Problem

You are given the following information:

o Yeast is required for the production of beer.

o 0.5 gallon of yeast slurry is available to provide 1.80 × 1011 yeast cells.

o Concentration of yeast slurry must be determined to find the volume of slurry required.

o Cell counting under a microscope is conducted to determine concentration of yeast slurry.

o Each yeast cell is approximately 4 µm in diameter.

o Sample of yeast under the microscope is diluted 100× first.

o Assume that the number of yeast cells observed in all five blue clusters of the microscopic view of the yeast cells are the same.

o Each blue square has area of 0.04 mm2 and depth of 0.1 mm.

(3)

What do you Recognise?

• “× 1011” refers to a large number and “gallon” is a unit for volume.

• Concentration of the yeast slurry

o must be determined to find the volume of yeast slurry required to provide 1.80 × 1011 yeast cells.

o unknown but can be found from cell counting under a microscope.

• A 4 µm diameter is probably very small and a microscope magnifies the cells to make cell counting easier.

• Cell counting involves counting the number of cells in a fixed area. • The volume of sample in each blue cluster of the microscopic

view of the yeast cells can be computed from its area and depth. • Diluting the sample of yeast slurry involves adding water to it.

• A 100× dilution may imply some degree of dilution.

(4)

What is your Approach?

• What is the purpose of using scientific notation, e.g.

“× 10

11

”?

• What does “µm” mean?

• How is “gallon” converted to other units of volume?

• What are the Units for other physical quantities?

• Why is a microscope used in cell counting?

• What is the purpose of a 100× dilution?

• How to determine concentration from cell counting?

• How to determine volume of yeast slurry required?

(5)

What is the Purpose of using Scientific

Notation?

• A quantity of “180 × 10

9

” yeast cells is the same as

“180000000000” yeast cells.

• Typically, when handling very large or small numbers,

scientific notations

are used.

• The basic format is

M

 10

N

, where

M

is any real number

between 1 and 10

and

N

is an

integer

.

Examples: 10-2 = 0.01

10-1 = 0.1

100 = 1

101 = 10

102 = 100

108 = 100000000

• If 18 000 000 000 is to be

(6)

What does “µm” mean?

• Prefix can be added to a unit to produce a

multiple of the original unit.

Factor Name Symbol 10-9 nano- n

10-6 micro- μ

10-3 milli- m

10-2 centi- c

10-1 deci- d

103 kilo- k

106 mega- M

109 giga- G

• The size of yeast cell is

approximately 4

μ

m,

which means

o

4

10

-6

m or

o

4

10

-3

m

m.

(7)

How is “gallon” converted to other

Units of Volume?

• Units are required to specify the value of the physical

quantities.

• Two common unit systems used today:

1) Imperial System (E.g. inch, foot, gallon, pound, ounce)

2) Metric System (E.g. metre, litre, kilogram)

Example of conversions between the unit systems: 1 foot (ft) = 0.3048 metres

1 pound (lb)  0.454 kilograms

(8)

What are the Units for other Physical

Quantities?

• The International System of Units (known as

SI unit

) is

the modern form of metric system.

• The SI has

7 basic (fundamental) units

:

Base quantity SI base unit

Name Symbol

Length metre m

Mass kilogram kg

Time second s

Temperature kelvin K

(9)

What are the Units for other Physical

Quantities? (Continued…)

• All physical quantities and measurements can be expressed

in

derived units

of the SI system. The symbols for derived

units are obtained by multiplication and division.

o Examples:

• The symbol for "per" (meaning "divided by") is “/” (slash).

o Example: If the concentration of a salt solution is 50 particles/m3,

it means that in every 1 m3 of the solution, there are 50 particles of

the solute (salt).

Derived quantity

SI derived unit

Name Symbol

Area metre square m2

Concentration

kilogram per metre cube

or

number of particles per metre cube

kg/m3

or

(10)

What is the purpose of a 100× Dilution?

• When the yeast sample is too

concentrated, the yeast cells

observed under the microscope

will crowd the counting grid

making it difficult to count them

effectively.

• Diluting the sample would

reduce

this

crowding effect

.

• To dilute a solution means to add

more solvent (usually water)

without the addition of more

solute.

Cells in a diluted sample Crowded cells in the original sample

Image from:

(11)

What is the purpose of a 100× Dilution?

(Continued…)

• Dilution

refers to the

reduction in concentration

of a solution.

• Dilution factor

tells us the

magnitude through which a solution

is diluted by

.

• By comparing the concentration, C

initial

, of the initial

(concentrated) solution to the concentration, C

final

, of the final

(dilute) solution:

o For example,

Di𝑙𝑢𝑡𝑖𝑜𝑛 𝑓𝑎𝑐𝑡𝑜𝑟 = 𝐶𝑖𝑛𝑖𝑡𝑖𝑎𝑙 𝐶𝑓𝑖𝑛𝑎𝑙

Cinitial 200 particles/L

Cfinal

20 particles /L

(12)

• The compound microscope

has two

systems of lenses for greater

magnification:

o The oculars, or eyepiece lenses, that the user looks into. They are usually 10× or 15× power.

o The objective lenses, or the lenses closest to the object. They are usually 4×, 10×, 40× and 100× power.

Why is Microscope used in Cell Counting?

• Microscope is used to observe small objects at

higher

magnification

. It uses visible light that is magnified and

concentrated by glass lenses.

• Specimens must be thin enough for light to pass through.

Ocular / Eyepiece lenses

Objective lenses

(13)

• For example, a combination of

10× ocular and 100× objective

lenses will produce a total

magnification of 1000×.

o An actual specimen of 1 µm

placed under such a microscope will hence be magnified 1000× and appear as 1 mm.

Why is Microscope used in Cell Counting?

(Continued)

• A specimen placed under the microscope using different

combination of ocular and objective lenses will produce a

different total magnification.

Ocular / Eyepiece lenses

Objective lenses

(14)

Why is Microscope used in Cell Counting?

(Continued)

• The smallest particle which can be seen by an

unaided human eye is about 0.01 mm.

• Given that a yeast cell is about 4 µm, which is

0.004 mm, without magnification, yeast cells cannot be

seen by an unaided human eye.

• The figure below shows a sample of yeast cell under

different magnifications in a microscope.

100× 400× 1000×

(15)

A104 Biology Problem 1

6

th

Presentation-Part 2

Cell Counting

Activity owner: Cindy Chua and Zheng Yuanli Approved by: Module Chair

(16)

How to Determine Concentration from

Cell Counting?

Area 0.04 mm2

Depth 0.1 mm

Grid in the hemocytometer

Yeast cells observed in one blue cluster under the microscope

1. Volume of each blue cluster

= 0.04 × 0.1 = 0.004 mm3

2. 1000 mm3 = 1 mL

1 mm3 = 0.001 mL

0.004 mm3 = 4 × 10-6 mL

3. By counting the number of yeast cells observed in one blue cluster, the concentration of the yeast slurry can be computed. For

example, if 66 yeast cells were counted,

Concentration = 66 cells / (4 × 10-6) mL

= 1.65 × 107 cells/mL

Image from:

http://www.bfz.biz/tag/cell-counting Image from:

(17)

4. Assuming that the number of yeast cells observed in all five blue clusters is the same, the approximate concentration of the yeast cell sample that is placed on the hemocytometer is also 1.65 × 107 cells/mL

5. Since the yeast sample in the hemocytometer has been diluted 100×,

Initial concentration = (1.65 × 107) × 100

=

1.65 × 10

9

cells/mL

Hemocytometer (to be viewed under the microscope)

Initial sample

100× dilution

Diluted sample

1.65 × 107 cells/mL

How to Determine Concentration from

Cell Counting? (Continued…)

Image from:

(18)

How to Determine Volume of Yeast

Slurry required? (Continued…)

6. Since 1.80 × 1011 yeast cells are required,

Volume of yeast slurry required = (1.80 × 1011) / (1.65 × 109)

= 109.09 mL required (2 d.p)

7. 1 gallon  3.79 L = 3790 mL

8. Since 0.5 gallon is available, 0.5 gallon  0.5 × 3790

= 1895 mL available

(19)

What You Have Learnt

• Recognize and use units found in the Metric and Imperial System

• Identify SI (metric) measurement symbols

• Use prefixes and their symbols to indicate decimal sub-multiples and multiples of the SI units

• Perform unit conversions

• Recognize the purpose of magnification and dilution factors in experiments

References

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