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Neural Dependency Parsing of Biomedical Text: TurkuNLP entry in the CRAFT Structural Annotation Task

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Figure

Table 2: CRAFT Train data split for development
Figure 1: Illustration of Stanford Dependencies (top) and Universal Dependencies (bottom) analyses for an exam-ple sentence (from PMCID:15207008)
Table 3: Development set results with different word vectors. CoNLL = baseline CoNLL shared task word vectors,Bio = custom word vectors induced on PubMed and PMC articles, CRAFT tokens = input text tokenized withmodel trained on CRAFT data
Table 5: Final submission results on test data

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