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Extracting regulator activity profiles by integration of de novo motifs and expression data : characterizing key regulators of nutrient depletion responses in Streptomyces coelicolor

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Figure

Figure 1. Activity profiles of selected motifs (those havingmotif using the factor model while in blue is the average expression profile of the (at most) top five significant targets
Figure 2. Predicted motif activity profiles grouped into 10 activity clusters. Individual motif patterns are distinguished by colour
Figure 3. Motif Sequence logos for activity cluster 7 (15 target genes, 4 motifs). (PHO box, albeit with the missing nta–d) Motif logos
Figure 5. Robustness analysis. The posterior probabilitiesthresholds, 9% (Original) and 10%
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