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Statistical Methods for the Analysis of Contextual Gene Expression Data

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Fig. 2.10 Hinton plot of the weight matrix for the true weights (left), weights inferred by a FA model with no ARD (middle), weights inferred by a FA model with ARD priors (right).
Fig. 2.12 Hinton plot of the weight matrix for the true weights (left), weights inferred by a FA model with an ARD per factor (middle), weights inferred by a Group Factor Analysis model (right)
Fig. 3.2 SVCA model definition. SVCA takes as input a single cell expression data as a cell times gene matrix (1) and a matrix of the cells spatial coordinates (a,b) (2)
Fig. 3.6 Simulation approach for comparing SVCA with alternative regression models.
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