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Software tools for visualizing Hi C data

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Figure

Table 1 Comparison of toolkit functionality
Fig. 1 Heat map and circular plot visualization of Hi-C data.visualization illustrating the bipartite structure of the mouse X chromosome, as plotted by Hi-Browse, using in-situ DNase Hi-C data [49]
Fig. 2 Local visualization modes.the promoter and enhancer elements, respectively. Below thecartoon representations, a virtual 4C plot from the three-dimensionalgenome browser is shown, which visualizes the Hi-C signal aroundthe NANOG promoter with a 1D re
Table 2 Speed benchmarks for loading and visualizing Hi-C data

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