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Gene and Network Analysis of Common Variants Reveals Novel Associations in Multiple Complex Diseases

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Figure

Table 1 Summary of minSNP, permSNP, SKAT, and VEGAS gene score methods and limitations
Table 2 Total numbers of cases and controls and number of SNP loci in GWA studies for the 12 phenotypes studied here
Figure 1 Schematic representa-tics at the observed gene statisticto determine the gene score
Figure 2 Quantile–quantile plots comparing gene scores produced by PEGASUS against those produced by minSNP, permSNP, and VEGAS
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