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Assessing biases in phylodynamic inferences in the presence of super-spreaders

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Figure

Figure 1 An exemplar of subsampling strategies evaluated in this study. A All, B Equal, C Herd infected, D Random, and E Herd strategy
Figure 2 Descriptive statistics of epidemic characteristics over 100 simulations. The average number of secondary cases per one infected farm (effective reproduction number; R) and its standard deviation in each of 100 simulated epidemics are shown in (A)
Figure 3 Results of the least‑squares dating (LDS) methods and distribution of the degree of the temporal signal contained in the simulated genetic data
Figure 4 Accuracies and precision of phylodynamic inferences from EBSP and BDSKY model using all available genetic sequences
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