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A genome wide association study of upper aerodigestive tract cancers conducted within the INHANCE consortium

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Figure

Figure 1. Manhattan plot of the ARCAGE and CE UADT cancer GWAS discovery phase. One clearly outlying marker, rs971074 is highlycorrelated with rs1573496, a SNP previously associated with UADT cancer risk
Figure 2. Imputation and LD patterns. Imputation and LD patterns across the (a) 4q23 (Upper panel: Single marker association results for imputed (green) and directly genotyped variants (blue)
Figure 3. Stratified analysis of 4 replicated SNPs located near alcohol metabolism genes
Table 2. Association between rs1229984, rs1573496, rs698, rs4767364, and drinking intensity in ever drinkers expressed as meanof ml of ethanol consumed per day.
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