• No results found

stageR: a general stage wise method for controlling the gene level false discovery rate in differential expression and differential transcript usage

N/A
N/A
Protected

Academic year: 2020

Share "stageR: a general stage wise method for controlling the gene level false discovery rate in differential expression and differential transcript usage"

Copied!
14
0
0

Loading.... (view fulltext now)

Full text

Loading

Figure

Fig. 1 Performance curves for DTU analysis based on two simulation studies. The false discovery proportion (for tests that aggregate all transcript hypotheses on a gene level (FDP, x-axis) is the fraction of falsepositive hypotheses over all rejected hypot
Fig. 2 The stage-wise testing paradigm. ng hypotheses are of interest for gene g. In the screening stage, evidence across the hypotheses isaggregated, and an omnibus test is performed that controls the FDR across all genes
Fig. 3 DGE simulation study results for the limma-voom analysis with five replicates in every treatment × time combination
Table 1 Number of genes found in the Hammer dataset on a 5%FDR level in the limma-voom analysis
+2

References

Related documents

V souvislosti s tímto výsledkem úzce souvisí čistý zisk (jedná se o výsledek hospodaření po odečtení daně z příjmu), jehoţ charakter je taktéţ rostoucí,

Meridian, has filed notice of intention to make three year Proof, to establish claim to the land above described, before United States Commissioner at Stanley, Santa Fe county, N.

Enhanced bike safety might encourage some motorists to try riding; more people switching to bicycles might mean fewer cars on the road, less congestion, better public health, and

ostensive and performative parts of the routines takes place both within a particular customer relationship and across the customer relationships sequentially as the catching season

For these reaches, large pota- modromous fish are still present in the catch and are highly preferred by fishers, but the abundance of large piscivores is lower (Quiros 1990) and

Legs with shorter setation than in male; mid femur bear- ing row of dorsal bristles as long as width of femur near base and becoming shorter toward apex, with ordinary

An initial list of keywords was generated that represented descriptions of some of the major styles and approaches consistent with evidence-based practices (EBP). As shown in