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Gene expression profiles and protein–protein interaction network analysis in AIDS patients with HIV-associated encephalitis and dementia

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Academic year: 2020

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Figure

Figure 1 Scheme of the brain tissue analysis from AIDS patients with and without apparent features of HIVe-induced dementia using the Affymetrix microarray platform
Figure 2 MA-plots of Affymetrix microarrays (n=4) plotted with common pseudo-array reference and represented each gene with a dot for AIDS patients with (A and Band without (C and D) HIVe-induced dementia.Notes: loess line and horizontal axis at M=0 are de
Figure 3 Box-plots of raw (A) and RMA-normalized (B) data from four replicate Affymetrix arrays.Note: The y-axis is on a binary logarithmic scale.Abbreviation: RMA, robust multiarray average.
Figure 4 “Induced” graphs of the enriched gO categories for gO:0005886 (A), gO:0044459gO (B), and gO:0000166 (C) terms with highest counts of Degs in samples from AIDS patients with and without HIVe-induced dementia.Abbreviations: GO, gene ontology; DEGs, differentially expressed genes; AIDS, acquired immunodeficiency virus syndrome; HIV, human immunodeficiency virus; HIVE, HIV-associated encephalitis.
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