Appendices for “Modeling the Signature of Sulfur Mass-Independent Fractionation produced in the Archean Atmosphere”
Appendix I - Validation
Appendix II - Additional tests of Halevy et al. (2010)
Appendix III - Additional model results, including DA08 and the SO2 photoexcitation band
Appendix I - Validation
We followed the overall numerical methodology of Pavlov and Kasting
(2002) in our sulfur isotope calculations. Briefly, this involves assuming that minor
sulfur isotopes species do not affect the concentrations of the major (32S) species, and ignores both doubly substituted sulfur species and reactions
involving more than one isotopic substituted species. Furthermore, we adjusted
reaction rate constants to maintain mass balance in the case of self-reactions or
multiply branching pathways (Pavlov and Kasting, 2002). While we followed
existing methodology, we re-wrote the numerical code independently, so present
4 diagnostic cases to ensure reliability:
I-a Using the 32SO2 cross section in place of minor isotopes
If the 32SO2 cross-section is used in place of the 34SO2 cross-section, a
correctly functioning model should produce no fractionation. Figure A1 shows
the δ34S computed under this test, revealing fractionations at the ~5x10-5 ‰ level,
up to a maximum of 10-4 ‰ (1 part in 10-7), which is the machine limit for a FORTRAN single-precision floating-point number. All internal calculations are
0±3x10-5 ‰. Therefore, this test supports the numerical validity of our model.
Figure A1 – A calculation showing fractionations at the lower limit of calculable outputs when the 32SO2 cross-section is used for 34SO2.
I-b Modeling both mass-dependent fractionation and mass-independent
fractionation
We do not include any mass-dependent fractionation processes in our
standard model, so our predicted δ33S and δ34S magnitudes only reflect the
mass-independent contributions induced by the isotopologue absorption
cross-sections. In addition, our δ33S and δ34S values are computed relative to standard
that we set to 1. Therefore our predictions for Δ33S magnitudes are
representative of those produced in the atmosphere, but the specific magnitudes
ï
ï
ïI
34S (‰)
height(km)
H SO
SO4AER S
S8AER
SO2 2 4
of δ33S and δ34S could be changed by additional photochemical reactions and are
not directly comparable to data without re-normalization of the standard. As a
further check of our methodology, we ran the standard model with rate constants
subject to dependent fractionation, both with and without the
mass-independent contributions. We chose the reaction SO + O + M → SO2 + M, for
which we arbitrarily assumed fractionation factors (=0.98) of 20 ‰ in δ34S and
10.3 ‰ (=0.9897) in δ33S. These fictitious adjustments to the reaction rate
constants yielded large δ34S (Fig A2a) but only very small mass-independent
fractionations (Fig A2b). The mass-independent fractionations imparted in the
stratosphere are of the order of 0.15‰, magnitudes that are generally
indistinguishable from mass-dependent production processes (Farquhar et al.,
2007 ; Johnston, 2011). The tropospheric MIF signatures that are likely to be
delivered to the Archean rock record from a representative atmospheric
mass-dependent processes imparting a 20 ‰ δ34S fractionation are ~0.01‰.
We next ran the standard model with both the mass-dependent
fractionation pathway as well as through the DA08 cross sections. The δ34S
fractionations from the mass-independent pathway dominate the resulting
atmospheric profile (Fig A2c), although there is obvious alteration from the δ34S
profile in the standard model. Figure A2d shows that the predicted Δ33S signal is
Figure A2 – Calculation showing mass-dependent fractionation. a/b) Models run with mass-dependent fractionation only. c/d) the standard model along with mass-dependent fractionation.
I-c Modeling a “rise of O2” scenario
Figure A3 shows a suite of model runs similar to those in Fig. 7, but
lacking any background CH4 levels. The CH4:O2 flux ratio is therefore maintained
at exactly 0.5 as the O2 flux increases from left to right, rather than ~0.6 as it was
on the right hand side of Fig. 7. In this experiment, O2 and CH4 mixing ratios
increase monotonically, but the atmosphere switches to an oxic state at an O2
to produce small MIF-S signals, with SO2 taking on negative Δ33S magnitudes (up
to ~ -1‰) while sulfate retains small positive magnitude Δ33S. As the atmosphere
becomes oxic (i.e., as the ozone layer forms (Kasting and Donahue,1980; Claire
et al., 2006; Goldblatt et al., 2006)) the predicted Δ33S magnitudes converge
towards zero. We do not present this as a fully self-consistent model of the rise
of O2 – rather, we simply highlight that our high-resolution integration calculates
zero magnitude Δ33S when the atmosphere is oxic, a further validation of our
Figure A3 – Predicted mixing ratios (top panel, left axis, solid lines), fluxes (top panel, right axis, dashed lines), sulfur exit channel fractions (bottom panel, left axis, shaded regions) and Δ33S (bottom panel, left axis, symbols), with colors and symbols as in Figs. 6 and 7. O2 and CH4 fluxes are increased from left to right, but kept at a 2:1 ratio. Δ33S values in S8 are -25 ‰ and dropping when the S8 exit channel is present.
10
ï10
ï10
ï10
ï10
ï10
ï10
ïmixing ratio
10
1010
1110
10
1310
flux (molecules cm
ï
s
ï)
CH
O
SO
S
aer
CH
flux
O
flux
10
1110
10
13O
flux (molecules cm
ïs
ï)
0.0
1.0
cumulative sulfur exit fraction
ï
ï
0
10
33
S (‰)
SO
AER
S
AER
SO
SO
aer
)
I-d Estimating Δ33S errors in our standard model
As a final check on the data quality of DA08 cross-sections, we performed
two Monte Carlo simulations of our standard atmosphere in which we vary the
SO2 cross section data within their given measurement errors. First, we ran 100
model atmospheres where we randomly selected 3xSO2 cross-section values within the range of measurement errors at each wavelength. This experiment
(not shown) revealed that the predicted DA08 Δ33S magnitudes in our standard
atmosphere are robust to 0.9, 1.5 and 0.6 ‰ in sulfate aerosol, elemental sulfur
aerosol, and SO2 respectively. To form an upper limit on errors, we ran another
100 model atmospheres where we attempted to maximize error at each
wavelength, by randomly selecting either the value, or the value plus the
measurement error or the value minus the measurement error. This experiment,
shown in Figure A4, shows that the predicted DA08 Δ33S magnitudes in our
standard atmosphere are robust to 1.2, 2.1 and 0.9 ‰ in sulfate aerosol,
elemental sulfur aerosol, and SO2, respectively. While the DA08 stated
measurement errors certainly propagate to uncertainty in the predicted
magnitudes, they do not affect our conclusions regarding the sign of Δ33S
produced in the Archean atmosphere. These calculations would not assess if
there were systematic offsets between the various cross-sections (Whitehill and
Ono, 2012). It does, however, confirm that if the DA08 cross-sections are in
Figure A4 – Results from 100 Monte Carlo runs of the standard model where the 3xSO2 were varied maximally (see A1.4 for details).
Appendix II - Additional tests of Halevy et al. (2010)
The predicted Δ33S values in our standard model reflect the radiative
transfer and absorption of solar photons from 180 – 220 nm through the
atmospheric gas column and DA08 cross-sections. Ueno et al. (2009) noted that
any atmospheric gas that absorbs in this wavelength range could modify the Δ33S
signal, by shielding both the quantity and energy of photons available for SO2
photolysis lower in the atmosphere. Furthermore, Ueno et al. (2009) noted that
SO2 photolysis through the DA08 cross-sections with 180 – 200 nm photons
generally yields residual SO2 with a negative Δ33S signal, while SO2 photolysis
0
20
40
60
80
model run number
ï
ï
ï
ï
0
33
S (‰)
)
SO
2SO
4aer
with 200 – 220 nm photons via DA08 yields residual SO2 with a positive Δ33S
signal. The conventional interpretation of the geologic record is that sulfates are
sourced from this residual SO2 pool, which is converted to sulfate aerosol and
deposited to the surface. Invoking this interpretation, Ueno et al. (2009)
concluded that there must be a strong atmospheric absorber between 200 – 220
nm, so that most of the SO2 photolysis would occur between 180 and 200 nm.
Following up on this interpretation, Halevy et al. (2010) calculated SO2 photolysis
only between 180 and 200 nm, effectively assuming complete opacity of the
atmosphere to photons between 200 and 220 nm. In Figure A5, we find that this
choice does lead to residual SO2 with a negative Δ33S signal with a
correspondingly negative sulfate aerosol. However, we stress that this is not a
self-consistent computation, as photons between 200 and 220 nm should
Figure A5 - A non self-consistent computation of the same atmosphere as shown in Figure 2b, but with Δ33S from SO2 photolysis only computed between 180 and 200 nm, following the assumption of Halevy et al. (2010). This model (along with the fictitious test shown in Fig. A9) is the only model atmosphere in our study which produced negative
Δ33
S sulfate and positive Δ33S sulfur.
Appendix III - Additional model results, including DA08 and the SO2 photoexcitation band
In this section, we present three additional results from our photochemical
models, followed by calculations showing that differential absorption in the SO2
photo-excitation band does not change our primary results.
III-a Additional tests using the Danielache et al. (2008) cross-sections
three figures similar to Figs. 6 and 7, where the independent variables are
biogenic sulfur fluxes (Fig. A6), the CH4/CO2 ratio (Fig. A7), and the CO2 mixing
ratio (Fig. A8).
Figure A6 varies the total biogenic sulfur input by scaling the modern
fluxes of CH3SCH3 (dimethyl sulfide), CH3SH (methyl mercaptan), CS2 (carbon
disulfide), and OCS (carbonyl sulfide) from 0.01 to 30 times their modern values,
following the methodology of Domagal-Goldman et al. (2011). In addition to other
species of interest, Figure A6a also shows the ground level OCS concentrations.
In the reducing atmosphere, biogenic sulfur gases tend to be largest near their
source at the ground and fall off with altitude, indicating that the increased loss
pathways arising from enhanced photolysis between 200-300 nm compensates
for the lack of oxidative destruction (Domagal-Goldman et al., 2011). Even at 30
times the modern biogenic sulfur flux, the peak OCS concentration is 1 ppb with
a column depth of ~1016 cm2, far below concentrations needed to shield SO2 photolysis and affect the MIF-S signal (Ueno et al., 2009). Rather, the predicted
Δ33
S changes are due to the increase in total sulfur in the system, which affects
the redox state and exit channels in a manner similar to Fig. 6c/d. The runs in Fig
A6 also contain volcanic sulfur fluxes, so do not show the decrease in reducing
capacity seen in the left most side of Figure 6c/d. As such, the left-most models
of Figure A6 (with volcanic fluxes + 1% of modern biogenic S fluxes) provide the
Figure A6 – Predicted mixing ratios (top panel, left axis, solid lines), fluxes (top panel, right axis, dashed lines), sulfur exit channel fractions (bottom panel, left axis, shaded regions) and Δ33S (bottom panel, left axis, symbols), with colors and symbols as in Figs. 6 and 7. Biogenic sulfur fluxes are varied from 1% of modern to 3000% of modern values.
10
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ï10
ï10
ïmixing ratio
10
1110
flux (molecules cm
ï
s
ï)
CH
O
SO
S
aer
OCS
SO
aer
CH
flux
O
flux
0.01
0.10
1.00
10.00
Biogenic Sulfur Flux (MDF)
0.0
1.0
cumulative sulfur exit fraction
ï
ï
ï
0
10
33
S (‰)
SO
AER
S
AER
SO
Figure A7a reproduces a Zerkle et al. (2012) model run in which an organic haze
forms when the CH4:CO2 ratio reaches ~0.2, affecting both the chemistry
(Domagal-Goldman et al., 2008; Zerkle et al., 2012) and climate (Haqq-Misra et
al., 2008) of the atmosphere. Figure A7b shows that SO2 becomes the dominant
exit channel and that Δ33S approaches 0‰, consistent with earlier predictions
that an organic haze might explain low Δ33S (Domagal-Goldman et al., 2008).
Large magnitude Δ33S occurs in the SO4 and S8 exit channels in the “thin haze”
regime, although these together comprise less than 20% of the total sulfur flux to
the surface. Interestingly, CH4 concentrations lower than the standard model
(e.g., with 0.005< CH4:CO2 < 0.01) lead to higher magnitude Δ33S in the SO2 and
sulfate channels, with very negative Δ33S in S8. The far left of Fig. A7 represents
increasingly oxic (although still reducing) atmospheres, with Δ33S magnitudes
falling towards 0‰ in the dominant exit channels, as might be expected during
collapsing methane levels prior to the Great Oxidation Event (Kurzweil et al.,
Fig A8 shows that changes in CO2 between modern values and 0.1 bar do not
significantly change Δ33S magnitudes in the SO2 or SO4 exit channels, while the
Δ33
S in S8 drops from -7‰ to -20‰ as the exit channel fraction drops from 50%
to 30%. Negative Δ33S signals of the magnitude predicted at our highest CO2
concentrations are not seen in the geologic record, but these atmospheric MIF
signals are likely diminished en route to sedimentary pyrite and in subsequent
diagenesis (Farquhar et al., 2013; Halevy; Halevy et al., 2010; Lyons, 2009; Ono
et al., 2009). Given the concerns with the data quality of DA08, we conclude that
CO2 is capable of changing atmospheric chemistry enough to perturb Δ33S
signals, even if these specific predictions do not appear to match data from the
Figure A8 – Predicted mixing ratios (top panel, left axis, solid lines), fluxes (top panel, right axis, dashed lines), sulfur exit channel fractions (bottom panel, left axis, shaded regions) and Δ33S (bottom panel, left axis, symbols), with colors and symbols as in Figs. 6 and 7. CO2 mixing ratios are varied from 400 ppm to 10%, with the vertical dashed line indicates the standard model.
10
ï10
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ïmixing ratio
10
1110
1210
13flux (molecules cm
ï
s
ï)
CH
4O
2SO
2OH
S
8aer
HC aer
SO4 aer
CH
4flux
O
2flux
0.001
0.010
0.100
CO
2mixing ratio
0.0
0.2
0.4
0.6
0.8
1.0
cumulative sulfur exit fraction
ï
ï
ï
0
10
33
S (‰)
SO
4AER
S
8AER
SO
2III-b Calculations including the Photoexcitation band (250-320 nm)
The isotopologue cross-sections for the SO2 photoexcitation band have been
recently measured at 8 wavenumber resolution between 250 and 320 nm
(Danielache et al., 2012), including the first published 36SO2 cross-section. In a 1-D atmospheric plume model (with modern levels of oxygen and ozone
rendering the photoylsis band irrelevant), these cross-sections have been shown
to generate time-dependent Δ33S/Δ36S signals on the order of 1‰ when SO2
concentration reach 1 ppm in days to weeks following a large stratospheric
eruption (Hattori et al., 2013). We enhanced our model to include the Danielache
et al. (2012) photoexcitation band cross-sections in addition to the DA08
photolysis band cross-sections, by the expansion of the wavelength grid between
250 and 320 nm to a resolution of 0.05 nm. Re-running the standard model with
both the photolysis and photoexcitation bands active, we predict only minor
changes in our predicted Δ33S values (Table 1). The magnitudes of the
quantitatively significant exit channels decrease (towards zero), implying that the
net effect of the differential absorption due to amplitude variations within the
photoexcitation band in a reducing atmosphere is to drive sulfates negative and
sulfides positive. This behavior is confirmed by a non-self consistent model
calculation in which we only integrate the 3xSO2 cross-sections from 250-320 nm.
This model, shown in Figure A9, produces low magnitude positive Δ33S in the S8
(2013), except for the low magnitudes. The maximum predicted SO2 mixing ratio
is ~0.5 ppb in the lower stratosphere (Fig 2a), so we assume our lower Δ33S
magnitudes are due to the 4 orders of magnitude less SO2 in our atmospheric
column. Very recently, larger magnitude Δ33S signals were produced in laboratory
experiments probing the photoexcitation band, and attributed to enhanced
lifetimes for excited species, independent of their excitation wavelength (Whitehill
et al., 2013). This mechanism, along with that of SO2 self-shielding in optically
thick SO2 plumes (Lyons, 2009; Ono et al., 2013) is beyond the scope of our
[image:18.612.90.523.352.670.2]current calculations but may be important for future efforts.
Figure A9 – A non self-consistent computation of Archean photochemistry including only the isotopic effect of the 250-320 nm photoexcitation band.
ï
height(km)
33
S (‰)
)
SO
4AER
S
8AER
H
2S
H
2SO
4SO
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