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A tandem simulation framework for predicting mapping quality

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Figure

Table 1 Relative change in area under CID (RCA) and relative change in sum of squared error (RCE) when running Qtip and Bowtie 2on Mason-simulated Illumina-like samples of various lengths
Fig. 1 CSED for various lengths. Cumulative squared-error difference plot from running Qtip and Bowtie 2 on Mason-simulated Illumina-like samplesof various lengths
Table 2 Relative change in area under CID (RCA) and relative change in sum of squared error (RCE) for various aligners and referencegenomes, expressed as percentage change
Fig. 2 CSED for various aligners and references. Cumulative squared-error difference plot from running Qtip with various reference genomes andread aligners
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