drosophila genome
Chromosomal Elements Evolve at Different Rates in the Drosophila Genome
... the Drosophila genome (Ranz et al. 2001). Thus, the genome of Drosophila can be seen as a mosaic of independent modules that can change their localization within the euchromatin without loss ...
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Transvection Is Common Throughout the Drosophila Genome
... rupted coding sequence (however, see Goldsborough and Kornberg 1996). We have shown that enhancers can act in trans, even if they are in cis to a fully functioning and strong core promoter and an intact coding sequence. ...
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Compositional heterogeneity and patterns of molecular evolution in the Drosophila genome.
... We have examined the Drosophila genome to explore relationships between the nucleotide content of large chromosomal segments and the base composition and rate of evolution [r] ...
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SEGMENTAL ANEUPLOIDY AND THE GENETIC GROSS STRUCTURE OF THE DROSOPHILA GENOME
... A set of Y-autosome translocations with appropriately positioned break- points, therefore, can in principle be used to generate a non-overlapping set of deficiencies and du[r] ...
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Engineering the Drosophila Genome: Chromosome Rearrangements by Design
... The RSr elements that we used provide approximately 1000 base pairs of homology (not entirely isosequential) at ectopic sites, but do not exhibit the efficient recombinat[r] ...
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MOLECULAR CHARACTERIZATION OF THE DROSOPHILA GENOME
... On the assumption that bacterial rRNA sequences will cross-react with most of the mem- bers of the family of rRNA cistrons (KOHNE 1968), this similarity in rate of reacti[r] ...
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A yeast artificial chromosome clone map of the Drosophila genome.
... We describe the mapping of 979 randomly selected large yeast artificial chromosome (YAC) clones of Drosophila DNA by in situ hybridization to polytene chromosomes.. Eight h[r] ...
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Direct targets of the D melanogaster DSXF protein and the evolution of sexual development
... other Drosophila species, across which the DNA-binding domain of DSX is very conserved (see ...each Drosophila genome ...sequenced Drosophila species (four examples are in ...
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Mutations of a Drosophila NPC1 Gene Confer Sterol and Ecdysone Metabolic Defects
... fly Drosophila melanogaster. The Drosophila genome encodes two NPC1 homologs, designated NPC1a and NPC1b, that exhibit 42% and 35% identity to the human NPC1 protein, ...many Drosophila ...
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Using the P{wHy} Hybrid Transposable Element to Disrupt Genes in Region 54D-55B in Drosophila melanogaster
... Spradling, A. C., D. Stern, A. Beaton, E. J. Rhem, T. Laverty et al., for in vitro amplification of DNA segments that lie outside the 1999 The Berkeley Drosophila Genome Project gene disruption boundaries ...
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Regulation of P-Element Transposase Activity in Drosophila melanogaster by hobo Transgenes That Contain KP Elements
... the Drosophila hsp70 promoter and three different incomplete P elements, KP, SP, and BP1, were inserted into the Drosophila genome by means of hobo transformation vectors and the resulting transgenic ...
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Comparative sequence analysis and tissue localization of members of the SLC6 family of transporters in adult Drosophila melanogaster
... candidate Drosophila genes that could encode Na + /Cl – -dependent transporters, we initially performed BLASTP and TBLASTN (Altschul et ...annotated Drosophila genome sequence (Adams et ...from ...
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Characterization of the Drosophila melanogaster alkali metal/proton exchanger (NHE) gene family
... Berkeley Drosophila Genome project (BDGP) has produced an automated annotation of the locus, which erroneously splits the AF235935 transcript into two genes, named NHE2 and ...in Drosophila ...
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SSCP Analysis of cDNA Markers Provides a Dense Linkage Map of the Aedes aegypti Genome
... contains most of the ⵑ1630 A. aegypti genetic markers. These similarity in a BLASTX search to genes of known func- were individually downloaded from GenBank and a BLASTX tion in GenBank. Primers were tested on family DNA ...
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Three-Dimensional Genome Organization and Function in Drosophila
... that the boundaries of domains with distinct chromatin states (combinations of histone modifica- tions) show only limited overlap with the insulator protein binding sites (Kharchenko et al. 2011; Schwartz et al. 2012). ...
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Transgenesis upgrades for Drosophila melanogaster
... years, Drosophila melanogaster has gained in popularity because of the availability of its genome sequence (Adams et ...fly’s genome permits the most sophisticated manipulations of any of the known ...
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Studying Recombination with High-Throughput Sequencing: An Educational Primer for Use with “Fine-Scale Heterogeneity in Crossover Rate in the garnet-scalloped Region of the Drosophila melanogaster X chromosome”
... matches at all nucleotide sites to each other or to the originally published D. melanogaster genome sequence (sites 18 and 27 in Figure 1D). However, the differences should only be at 1–2% of nucleotide sites, so ...
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Zygotic Lethal Mutations With Maternal Effect Phenotypes in Drosophila melanogaster. II. Loci on the Second and Third Chromosomes Identified by P-Element-Induced Mutations
... We have analyzed a collection of 496 autoso- mal P element-induced mutations generated by the Berkeley Drosophila Genome Project and identified a number of mutants associa[r] ...
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Rates and patterns of scnDNA and mtDNA divergence within the Drosophila melanogaster subgroup.
... (4) The Drosophila genome appears to consist of two distinct classes of scnDNA with respect to rate of evolutionary change, a very rapidly evolving fraction and a relativ[r] ...
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Characterization of the flamenco Region of the Drosophila melanogaster Genome
... deficiency and a complementing Y-linked duplication (Prud’- su( f ), which is the most proximal (Mitchelson et al. homme et al. 1995). Embryos were collected for 18 hr at 23⬚. 1993), have been cloned. The fog gene was ...
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