genome scan
A Genome Scan and Linkage Disequilibrium Analysis among Chromosomal Races of the Australian Grasshopper Vandiemenella viatica
... viatica genome, in order to look more closely at how differentiation between chromosomal races is related to areas of low recombination, particularly in a secondary contact ...a genome scan of ...
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Genome scan meta analysis of schizophrenia and bipolar disorder, part III: Bipolar disorder
... susceptibility loci. The data sets only partially over- lap—that is, their analysis included four studies that contributed identical data to the present meta-analyses, three that were not included here, and four for ...
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Genome Scan for Childhood and Adolescent Obesity in German Families
... The whole genome scan performed with sample 1 based on all 452 markers did not reveal a MLB LOD score ⱖ2. Two peaks on chromosomes 8p and 19q surpassed a MLB LOD score of 1.5. MLB LOD scores of 2 additional ...
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A method dealing with a large number of correlated traits in a linkage genome scan
... We used the program Merlin-regress [5] to perform the linkage genome scan for each quantitative trait. Merlin- regress implements a method proposed by Sham et al. [6], which is based on a regression of ...
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A Genome Scan for Quantitative Trait Loci in a Wild Population of Red Deer (Cervus elaphus)
... Recent empirical evidence indicates that although fitness and fitness components tend to have low heritability in natural populations, they may nonetheless have relatively large components of additive genetic variance. ...
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A two dimensional genome scan for rheumatoid arthritis susceptibility loci
... Multi-locus linkage analysis methods have been devel- oped and applied to complex human traits. Such methods are useful in detecting novel loci that contribute to the trait susceptibility only through their genetic ...
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Detecting polygenic selection in marine populations by combining population genomics and quantitative genetics approaches
... ing genome scan methods that look for loci with exceptional levels of differentiation compared with the rest of the genome (de Villemereuil et ...
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Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates
... As a proof of concept, analyses were carried out on real data sets from both model and nonmodel species. Results obtained for the French cattle data demonstrated the versatility of the approach and illustrated how ...
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Investigation of putative susceptibility regions to inflammatory bowel disease
... previous genome scan (IBD MAS of ...previous genome scan were caused by genetic heterogeneity, then sharing at the level observed in the previous genome scan should have been ...
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Genome-wide linkage scan on estimated breeding values for a quantitative trait
... the genome scan will be minimal, although this requires further ...the genome scan lends some support to the type I error rate not being grossly ...
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A genome-wide scan to detect signatures of recent selection in Australian Merino sheep
... to genome, which is performed by link- age disequilibrium (LD) based association QTL map- ping or candidate genes ...from genome to phenotype, performed by statistical evalua- tion of genomic data to ...
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A Genome-Wide Scan for Linkage to Chromosomal Regions in 382 Sibling Pairs with Schizophrenia or Schizoaffective Disorder
... the genome scan in affected sibling pairs were analyzed by using both the 2-point and the multipoint nonparametric allele sharing tests in MAPMAKER/SIBS ...
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Whole genome linkage scan of recurrent depressive disorder from the depression network study
... a genome scan of families multiple affected with recurrent, early-onset major depressive disorder (MDD), thereby select- ing a strictly defined phenotype closely similar to that used by ...7.3. ...
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Genome wide scan reveals association of psoriasis.pdf
... J.T.E., G.G.K., A.M.B. and G.R.A. designed and directed the study. J.D., C.H., P.E.S., D. Goldgar, B.J.F., Y.L. and G.R.A. designed and carried out the main genome scan analysis. R.P.N., K.C.D., C.H., J.D., ...
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Scan of Human Genome Reveals No New Loci Under Ancient Balancing Selection
... We computationally filtered the reads in ways that eliminated most of these and then tested 991 of the most promising cases experimentally on a panel of 10 African Americans to validate the SNPs in this region (see ...
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Genome-wide scan in Hispanics highlights candidate loci for brain white matter hyperintensities
... a genome- wide significance level, to uncover an association with small-to-moderate effect ...1000 Genome database, imputations were based on pooled samples from populations of the Americas, Europe, Africa, ...
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A Genome Wide Association Scan of Bovine Tuberculosis Susceptibility in Holstein Friesian Dairy Cattle
... Multi dimensional scaling analysis of an identity by state (IBS) matrix of the samples revealed population substructure among the Holstein-Friesian samples (Figure 1). This correction uses the observed proportion of IBS ...
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A genome wide association scan for rheumatoid arthritis data by Hotelling's T2tests
... First, we applied the Hotelling ’ s test statistics and performed a genome-wide scan on the NARAC data by analyzing one SNP at a time. The NARAC data contained a total of 2062 individuals (868 cases and ...
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Genome wide search for breast cancer linkage in large Icelandic non BRCA1/2 families
... Recent genome-wide searches (GWS) for BC linkage in families without alterations in known genes (non- BRCA1/2 families) [10-16], together with earlier sugges- tions of single loci [17-19], indicate close to 20 ...
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Scan API Scan Caching Scan Batching Filters
... 2: Configure Scanner Caching per HTable Instance • Call hTable.setScannerCaching10 to change caching per HTable instance • Will override caching configure for the entire HBase cluster • [r] ...
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