Quality assessment and trimming raw reads
QTrim : a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform
... trimmed reads output by PRINSEQ are, on average, slightly longer than those output by QTrim (Figure ...low quality bases (quality score < 20) at the 3′ end of its trimmed ...low quality bases ...
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Rapid microbiological assessment in raw milk. Validation of a rapid alternative method for the assessment of microbiological quality in raw milk.
... Microbiological quality of pasteurized milk or other milk products is dependent on microbiological quality of raw ...hygienic quality of raw ...the assessment of the ...
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Analysis of quality raw data of second generation sequencers with Quality Assessment Software
... the reads, generating contigs; mismatches indicate a lack of homology and are not ...developed Quality Assessment Software, with which one can review graphs showing the distribution of quality ...
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Quality Assessment of Raw and Pasteurized Milk Using Microbiological Parameters
... the quality of raw milk sold in the markets is necessary because humans have to avoid contaminations with pathogen agents and the appearance of epidemic ...
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Quality and safety assessment of raw bovine milk in Herat province, Afghanistan
... These results will serve as primary data for extension programming aimed at improving milk quality in the region. Our results indicate that a large part of these efforts should focus on milk hygiene and sanitation ...
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Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads
... L O RDEC: impact of read correction on genome assembly To summarize, experiments on real data taken from bac- terial and yeast species, up to the case of a vertebrate genome, show that L O RDEC achieves a quality ...
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Life Cycle Assessment and Quality of Utilization of Paint Waste as a Raw Material of Paving Block
... as raw material for paving block products can reduce the environmental impacts and provide economic ...cycle assessment is a tool for measuring the environmental impact of this utilization compared to the ...
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Needs Assessment. Team 10. Tree Trimming Snake Robot. Members:
... of Quality, see Figure 1. By design, the House of Quality is a methodological tool that consolidates the need of the customer and the need of the ...of Quality it may be seen that the highest ranking ...
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An Assessment of Microbiological Quality of Raw Milk and Yogurt Samples from Five Selected Districts of Bangladesh
... microbiological quality of raw milk and yogurt samples collected from five selected district of ...microbiological quality. The range of TVBC and TCC in raw milk samples were ...
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Article: Microbiological quality assessment of raw milk and water samples from Noakhali district, Bangladesh
... Another study was conducted by Ohanu et al. (2012) and he expressed an evidence of Coliform contamination in all the samples of sachet and tap water. 3.3. Average count of yeast and mold in milk and water samples Average ...
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Assessment of Safety and Quality of Raw Whole Cow Milk Produced and Marketed by Smallholders in Central Highlands of Ethiopia
... and quality of raw whole cow milk through determination of chemical and bacteriological quality was conducted in Ejere, Walmera, Selale and Debre-Birhan districts of central highlands of ...108 ...
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Assessment of Raw Milk Microbial Quality at Different Critical Points of Oromia to Milk Retail Centers in Addis Ababa
... The overall mean coli form counts ranged from 5.42±1.73 to5.78±0.95; 5.53±1.03 to 5.63±0.62 and 4.18±1.22 to 6.35±0.43 log cfu/ml from farmer and retail shops of Sebeta, Holeta and Sululta respectively. E.coli was ...
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A glance at quality score: implication for de novo transcriptome reconstruction of Illumina reads
... one) reads are shown in orange and green, respectively. Untrimmed reads result in more contiguous assemblies, which is probably due to a larger number of paired reads that provide sup- port for ...
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Thermodynamic assessment of raw material use in passenger vehicles
... As it was shown in this chapter, thermodynamic rarity is a very useful indicator for measuring downcycling, as it accounts not only for the quantity, but also for the quality of the metals that become functionally ...
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The Improvement of Quality of Pasta on the Basis of the Vegetable Raw Materials
... Apparently from the obtained data, the amount of flour from grain and bean crops had impact on structure of dough in the course of a batch, appearance, taste, color and cooking properties of pasta. One of the most ...
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Text Cluster Trimming for Better Descriptions and Improved Quality
... a trimming method that removes texts that do not contain any, or a few of the words in the cluster ...clustering quality for the trimmed clustering compared to the original. The trimming thus has two ...
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Improving quality of high-throughput sequencing reads
... of reads or ...corrected reads are in the context of downstream ...corrected reads that can be aligned to a reference sequence with- out mismatches or ...when reads are aligned to wrong ...
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AFT Linked-Reads Raw Blood WGS Library Preparation Kit 24 rxn
... Linked-Reads Raw Blood WGS Library preparation technology utilizes multiple strand-displacement amplification by the strand-displacing enzymes to seamlessly integrate the Amplification, Fragmentation, and ...
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Mapping-free and assembly-free discovery of inversion breakpoints from raw NGS reads
... as reads in the assembly framework, a de Bruijn Graph is a directed graph where the set of vertices corresponds to the k-mers from the sequences, and a directed edge connects a source k-mer a to a target k-mer b ...
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Determination of raw milk quality
... of raw milk – the amount of milk supplied by single provider at one time ...of raw milk – package of milk delivered to dairy plant : tank, pitcher ...3. raw milk sample – a quantity of milk picked up ...
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