Sequence analysis of the E. festucae pak genes
Sequence analysis of the VSX1 and SOD1 genes in families with Keratoconus and a review of the literature
... KC genes sequenced, we aim to perform genome wide linkage analysis using dense SNP arrays to identify chromosomal regions linked with the disease in this Saudi ...cohort. Genes for sequencing in the ...
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A sequence-based approach to identify reference genes for gene expression analysis
... that genes commonly used for reference in qPCR experimentation were sub-optimal, and identified novel, more consistently expressed genes to be superior as reference ...reference genes such as ACTB ...
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Target Sequence Capture of Nuclear-Encoded Genes for Phylogenetic Analysis in Ferns
... Samples, library prep, and sequencing We chose 24 fern samples to evaluate the efficacy of our approach (Table 1). Taxa were selected from across fern diversity with a slight emphasis on Dennstaedtiaceae, Lindsaeaceae, ...
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Identification of genes related to floral organ development in pak choi by expression profiling.
... Mutant analysis has demonstrated that the absence of FFT transcripts affects flavonoid levels in the plant, and that altered flavonoid metabolism has wide-ranging consequences; root growth, seed development and ...
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DNA sequence analysis of artificially evolved ebg enzyme and ebg repressor genes.
... tion is that the 188 to 196 regions of the wild-type ebgR repressor might exclude lactulose and Gal-Ara by steric hindrance, whereas a looser conformation of this region [r] ...
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Maize R2R3 Myb Genes: Sequence Analysis Reveals Amplification in the Higher Plants
... Myb genes, but few have been found in monocots, animals, and ...residue-long sequence spanning the region between the conserved DNA-recognition helices (Myb BRH ) of R2R3 Myb ...Myb genes, and ...
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Sequencing Salmonella, hila, HilA, A, A, A... A sequence analysis of two mutant hila genes
... conserved. One possible explanation for the avirulence of Salmonella strains A5 and B3 is that the induced mutations in hilA modified the amino acid sequence of protein HilA. These changes may have rendered the ...
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PAK Paradox: Paramecium Appears To Have More K+-Channel Genes than Humans
... two genes contained different 5⬘ and 3⬘ untranslated regions, and while the intron positions were conserved, the intron se- quences were ...separate genes, each with unique IESs removed during the ...
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Comparative Phylogeny of the Genus Bordetella Using Sequence Analysis of 16S rRNA and ompA Genes
... Original Article Background: The genus Bordetella harbors 16 species; three of them are well-known for their high medical importance. The phylogenetic diversity of the genus is currently not very well investigated. ...
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De novo transcriptome sequence assembly and analysis of RNA silencing genes of Nicotiana benthamiana
... RNAi genes (Figure 5 and Table S4) we first scanned for homologues in the Solgenomics tomato ...high sequence identities and high query coverage ...aa sequence was compiled which, although shorter ...
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Patterns of sequence conservation in presynaptic neural genes
... refer e e d re sear chdeposited research interacti o ns inf o rmation for example, if a base was annotated as both CDS and UTR, then it was counted as belonging to the UTR ...identify sequence ...
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A novel 40kDa N-terminal truncated carboxypeptidase E splice variant: cloning, cDNA sequence analysis and role in regulation of metastatic genes in human cancers
... acid sequence and biological ...many genes that promote proliferation, differentiation, axonal guidance and cell migration, as well as programmed cell death, all events that take place during the formation ...
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Somatic sequence alterations in twenty one genes selected by expression profile analysis of breast carcinomas
... toward genes of the protein kinase family and reported a rate of approximately one somatic alteration per megabase of ...in genes altered in expression pattern in breast can- cer is slightly higher than ...
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Microarray analysis of orthologous genes: conservation of the translational machinery across species at the sequence and expression level
... of genes have been organized into classes defined by their functional annotation and the result- ing groups compared with each other to reveal possible ...The analysis of yeast genes has revealed a ...
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Dynamic pathway analysis of genes associated with blood pressure using whole genome sequence data
... genetic analysis of longi- tudinal phenotypic data is important for understanding the genetic architecture and biological variations of com- plex ...The analysis can help identify the stage of disease ...
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Revealing New Measles Virus Transmission Routes by Use of Sequence Analysis of Phosphoprotein and Hemagglutinin Genes
... Received 23 August 2010/Returned for modification 13 October 2010/Accepted 17 November 2010 With improved measles virus (MV) control, the genetic variability of the MV-nucleoprotein hypervariable region (NP-HVR) ...
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The Clinical Significance of Unknown Sequence Variants in BRCA Genes
... cosegregation analysis, case-control analysis, personal and family history and co-occurrence of mutation disease; together with indirect measures, including amino acid conservation, severity of amino acid ...
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Characterization of Agglutinin-like Sequence Genes From Non-albicans Candida and Phylogenetic Analysis of the ALS Family
... ALS genes in other Candida species: Because of the plasy index of ...SAP genes have been documented parsimony tree and placed ALS7 as the most basal lineage are obvious ones to examine for the presence of ...
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Simultaneous Sequence Analysis of the 16S rRNA and rpoB Genes by Use of RipSeq Software To Identify Mycobacterium Species
... In addition to demonstrating the importance of two DNA targets for species-level identification, we evaluated an alter- native to multitarget DNA analysis by using the RipSeq dual- locus module. Previously, the ...
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Cortical Brain Malformations Panel Sequence Analysis and Exon-Level Deletion/Duplication Testing of 61 Genes
... SRPX2, TBC1D20, TMEM5, TUBA1A*, TUBA8, TUBB, TUBB2A*, TUBB2B, TUBB3, TUBB4A*, TUBG1, VLDLR, WDR62 *Only large deletion/duplications may be detected for the ACTB, ARX, DCHS1, OCLN, POMGNT1, TUBA1A, TUBB2A and TUBB4A ...
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