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technology differentially expressed genes

Original Article Genome-wide DNA methylation and transcriptome changes in Mycobacterium tuberculosis with rifampicin and isoniazid resistance

Original Article Genome-wide DNA methylation and transcriptome changes in Mycobacterium tuberculosis with rifampicin and isoniazid resistance

... microarray technology were performed to expound DNA methylation profiles and differentially expressed genes in rifampicin or isoniazid resis- tant ...of Genes and Genomes (KEGG) ...

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Microarray profile of differentially expressed genes in a monkey model of allergic asthma

Microarray profile of differentially expressed genes in a monkey model of allergic asthma

... 149 genes encoded by the 169 cDNA elements, nine genes were represented by two cDNA elements and two genes by three cDNA ...eleven genes, their multiple cDNA elements were located on the ...

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Effects on gene expression of yeast Hansenula anomala by low energy nitrogen ion implantation

Effects on gene expression of yeast Hansenula anomala by low energy nitrogen ion implantation

... (SSH) technology was used to construct a forward subtractive cDNA library of mutant strain ...9 differentially expressed genes. Among these genes, 7 differentially ...

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Networking of differentially expressed genes in human cancer cells resistant to methotrexate

Networking of differentially expressed genes in human cancer cells resistant to methotrexate

... ubiquitously expressed protein elongation factor that recruits amino- acetylated tRNAs to the A site of the ribosome (see [59] for a ...siRNA technology against EEF1A1 are in keeping with these results, and ...

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Whole transcriptome, high throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro

Whole transcriptome, high throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro

... 2,584 genes (1,392 upregulated; 1,192 downregulated) and 757 putative natural antisense transcripts (558 upregulated; 119 downregulated) that were differentially expressed based on sense and ...

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Identification of Differentially Expressed Genes in Scrapie-Infected Mouse Brains by Using Global Gene Expression Technology

Identification of Differentially Expressed Genes in Scrapie-Infected Mouse Brains by Using Global Gene Expression Technology

... the differentially regulated genes that correlate with the development of prion diseases for a better understanding of their pathological ...121 genes whose expression increased at least twofold in ...

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Screening and functional analysis of differentially expressed genes in EBV transformed lymphoblasts

Screening and functional analysis of differentially expressed genes in EBV transformed lymphoblasts

... of differentially expressed genes Total RNA was extracted from seven cases of the nor- mal lymphocytes and transformed lymphoblasts, re- spectively, marked with dihydroxyfluorane after reverse ...

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Statistical Tests for Identification of Differentially Expressed Genes in Microarray Data

Statistical Tests for Identification of Differentially Expressed Genes in Microarray Data

... Microarray technology has been introduced as an important tool in genome research during the last two decades and it is used to simultaneously evaluate the expression levels of thousands of genes ...find ...

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Tool for the identification of differentially expressed genes using a user-defined threshold

Tool for the identification of differentially expressed genes using a user-defined threshold

... microarray technology has been a significant asset to scientific research by saving researchers time and effort, but these researchers are faced with the challenge of the analysis of the microarray expression ...

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DNA methylation biomarkers for hepatocellular carcinoma

DNA methylation biomarkers for hepatocellular carcinoma

... and differentially expressed genes were implemented using the online tool ...STRING. Genes that were hypomethylated and highly expressed were enriched for cell cycle regulation, while ...

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Signaling transcript profile of the asexual intraerythrocytic development cycle of Plasmodium falciparum induced by melatonin and cAMP

Signaling transcript profile of the asexual intraerythrocytic development cycle of Plasmodium falciparum induced by melatonin and cAMP

... several genes implicated in a variety of biological ...hours, genes involved in cell division, proliferation, egress and UPS were ...modulate genes that are coupled to aerobic respiration and ATP ...

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Clinical value and potential mechanisms of COL8A1 upregulation in breast cancer: a comprehensive analysis

Clinical value and potential mechanisms of COL8A1 upregulation in breast cancer: a comprehensive analysis

... Collagen type VIII alpha 1 chain (COL8A1), also named C3orf7, is located at chromosome 3 and encodes alpha 1 chain in collagen type VIII, which is an essential component of extracellular matrix (ECM) [30]. Previous ...

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Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

... significant differentially expressed probes (p < ...in differentially expressed genes at a Fisher exact p value threshold (EASE score) less than ...of Genes and Genomes (KEGG) ...

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Comprehensive analysis of DNA methylation and gene expression profiles in cholangiocarcinoma

Comprehensive analysis of DNA methylation and gene expression profiles in cholangiocarcinoma

... two genes can be used for the differential diagnosis between cholangiocarcinoma and other biliary diseases ...specific genes with aberrant DNA methyla- tion or individual gene methylation profiling microar- ...

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Gene expression in the brain of a migratory songbird during breeding and migration

Gene expression in the brain of a migratory songbird during breeding and migration

... different genes are involved in the migratory phenotypes of differ- ent species ...the genes that influence the behavioral adaptations associated with mi- gration is still in its infancy and among the so ...

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Genome and transcriptome delineation of two major oncogenic pathways governing invasive ductal breast cancer development

Genome and transcriptome delineation of two major oncogenic pathways governing invasive ductal breast cancer development

... To develop the concept of low- and high- grade tumors independence, we sought to provide a comprehensive transcriptome characterization of the low genetic grade (LGG, defined in this work as HG1 and HG1-like) and high ...

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Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes

Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes

... of genes that are seemingly downregulated in unfavourable tumours, ...as differentially expressed in NB tumours in several independent research studies [14,15,18,31-36] (Table ...12 genes ...

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Microarray data analysis: a practical approach for selecting differentially expressed genes

Microarray data analysis: a practical approach for selecting differentially expressed genes

... highly expressed genes will rarely have a 2-fold change in mRNA levels, and that lowly expressed genes will commonly have a 2-fold or greater change, led to the development of models that ...

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Data Mining in Networks of Differentially Expressed Genes during Sow Pregnancy

Data Mining in Networks of Differentially Expressed Genes during Sow Pregnancy

... The completed cDNA sequences and location were used to obtain the full DNA sequences by bio- informatic approaches such as BLAST in the Ensembl website (www.ensembl.org). Seventeen pairs of pri- mers for these three ...

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Identification of differentially expressed genes in the development of osteosarcoma using RNA-seq

Identification of differentially expressed genes in the development of osteosarcoma using RNA-seq

... pathway genes, such as PLA2G3, PTGIS and GGT7, prolong post-treatment disease-free survival of patients with oral cancer ...abnormally expressed mRNAs might play vital roles in OS tumorigenesis through ...

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