Tertiary structure prediction
Application of Bioinformatics on Protein Structure Prediction
... Protein tertiary structure prediction has been an important scientific problem for few decades, especially in bioinformatics and computational biology (Eisenhaber et ...protein tertiary ...
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Artificial Neural Network aided Protein Structure Prediction
... 3-D structure. The tertiary structure is the 3D fold of the protein molecule comprising of secondary structure elements: alpha (α) helices, beta (β) sheets and loops ...the tertiary ...
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Prediction of RNA 3D Structure
... organized. Prediction of RNA structure is a big challenge for the ...Many prediction algorithms have been develop for RNA secondary structure ...But prediction of tertiary ...
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Sparsification of RNA structure prediction including pseudoknots
... pseudoknot prediction algorithms, we focus on the fastest algorithm (R&G) and the most general one (R&E) and develop sparse variants of these dynamic programming algo- ...
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Structure Prediction of G Protein Coupled Receptors
... protein prediction method by generalizing the methods used for soluble proteins, but it was not accurate enough for drug ...GPCR structure prediction community, GPCRDock2013 [4], showed that ...
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In Silico Analysis Brucella OMPs and CagA for Expansion of a Subunit Vaccine Candidate Versus Brucellosis
... and aliphatic which were computed by ‘‘ProtParam’’ and are listed in Table 1. The results of the amino acid composition of the designed protein showed that alanine (20%), isoleucine (10.8%), and proline (9.2%) are more ...
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Computational Approach in Complex Structure Prediction for Drug Design Activity
... Molecular docking attempts to predict the structure and stability of the complex formed by two interacting molecules, often a protein and its ligand. There may be a problem of “lock-and-key” in docking, where one ...
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On the Hardness of Energy Minimisation for Crystal Structure Prediction
... Crystal Structure Prediction ( csp ) is one of the central and most challenging problems in materials science and computational chemistry. In csp , the goal is to find a configuration of ions in 3D space ...
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LTR – MDTS structure – A structure for Multiple Dependent Time Series Prediction
... Also, if we try to evaluate the successfulness of neural networks by rating it with a zero deviation SRC criteria, where it is expected from a network to generate referees’ output positions in exact values without ...
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Structure-based software reliability prediction*
... In this section, we discuss various approaches to reli- ability prediction when the architecture of the applica- tion is modeled either by a DTMC or a CTMC. Some of these approaches have been presented in the ...
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Protein structure prediction with evolutionary algorithms
... problem for the HP model 4]. We focus on a simple lattice model because lattice models can capture many global aspects of protein structures, they are inexpen- sive to use, and it is possible to design test problems for ...
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Analysis and prediction of protein structure: Disulphide bridges
... the tertiary- and secondary-structure prediction of small disulphide-rich, predominantly p/irregular protein folds ...secondary structure (Richardson and Richardson, 1989) and are often best ...
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Multi View Video System for Wireless Channel
... exists among frames. The redundancy in multi-view video streams consists of inter-view redundancy (between adjacent camera views) and temporal redundancy (between temporally successive frames of each video)These types of ...
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BCHM 3050 Lecture 7.pptx
... The disruption (or unfolding) of tertiary & secondary protein structure that leads to loss of protein function.. Notes:.[r] ...
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Fatigue life prediction in a cancellous bone structure
... The rising incidence of osteoporosis within the aging society is becoming a major health problem. Aged-related osteoporosis is a systemic disease characterized by reduced bone mass and deteriorated bone ...
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5098.pdf
... directed structure modeling, we examined two RNAs for which the in vitro SHAPE data were clearly incompatible with the accepted ...predicted structure (Table 2.1). Nonetheless, a large part of each ...
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Characterization of Influenza H5N1 Nucleocapsid Protein for Potential Vaccine Design
... the structure of one NP protomer in the trimeric crystal is representative of NP structure in both its monomeric and trimeric/tetrameric/higher oligo- meric forms ...
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Problem-based learning in resource-poor settings: lessons from a medical school in Ghana
... In spite of these training workshops, the problems per- taining to assessment has persisted and it is one of the most difficult problem to deal with. Examinations for summative and annual assessment do not have the de- ...
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Synthesis, Evaluation and Docking studies of Cholecalciferol Derivative
... the structure-activity correlation, Compound activity prediction is done by ‘‘comparing’’ the structure of query compound with the structure of well-known biological active substrate existing ...
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Comparative Analysis of Gene Prediction Tools: RAST, Genmark hmm and AMIgene
... gene structure prediction and annotation is the fundamental step towards the understanding of genome ...gene prediction tool and pipeline have been developed over the past ...the prediction ...
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