[PDF] Top 20 A new cis-acting element for RNA replication within the 5' noncoding region of poliovirus type 1 RNA.
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A new cis-acting element for RNA replication within the 5' noncoding region of poliovirus type 1 RNA.
... The 5 9 NCR of poliovirus RNA contains signals important for virus-specific RNA replication and ...the 5 9 -terminal cloverleaf-like structure (nt 1 to 88) and the ... See full document
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Sequence Requirements for Viral RNA Replication and VPg Uridylylation Directed by the Internal cis-Acting Replication Element (cre) of Human Rhinovirus Type 14
... ternal replication signals were identified within the open read- ing frames of Theiler’s virus, a cardiovirus (9), poliovirus type 1 (PV-1) (5), and, more recently, HRV-2 ... See full document
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A Hepatitis C Virus cis-Acting Replication Element Forms a Long-Range RNA-RNA Interaction with Upstream RNA Sequences in NS5B
... candidate RNA structures. Given the poor resolution of RNA structure in the HCV CRE, we used an independent, non-energy-minimizing algorithm that makes better use of the substantial comparative sequence ... See full document
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Packaging of human immunodeficiency virus type 1 RNA requires cis-acting sequences outside the 5' leader region.
... A 1.1-kb env gene fragment encompassing the Rev-responsive element was absolutely required for the expression and encapsidation of vectors containing cis-acting repressive sequences and [r] ... See full document
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Host cell proteins binding to domain IV of the 5' noncoding region of poliovirus RNA.
... our poliovirus type 1 full-length cDNA to produce the pT7PV1-325 ...(56), RNA with this mutation was unable to produce viable virus (data not ...or replication. Transla- tion and ... See full document
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A Hypervariable Region within the 3′ cis-Acting Element of the Murine Coronavirus Genome Is Nonessential for RNA Synthesis but Affects Pathogenesis
... canonical 5 ⬘ GGAAGAGC3 ⬘ ...MHV replication in tissue culture, but we were unable to discern whether there was any pattern among the variant se- quences that had been ...wild type, for which the ... See full document
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Novel cis-Acting Element within the Capsid-Coding Region Enhances Flavivirus Viral-RNA Replication by Regulating Genome Cyclization
... that RNA can fold into complex tertiary structures to achieve various functions (46–48), and many RNA regulation elements with spe- cific tertiary structures have been identified, even in mRNAs, such as ... See full document
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cis-acting sequences involved in human immunodeficiency virus type 1 RNA packaging.
... Retroviral RNA packaging is a specific process involving interactions among cis-acting sequences in the RNA genome and viral structural ...virus type 1 (HIV-1), an ... See full document
5
The 5′-Terminal Region of the Aichi Virus Genome Encodes cis-Acting Replication Elements Required for Positive- and Negative-Strand RNA Synthesis
... loop region (nt 55 to 60) of SL-B of mut112-118 to restore the base-pair interaction with nt 112 to 118, excluding the guanosine at nt 116 (mut55-60/112-118) ...(Table 1), the RNA replication ... See full document
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Attenuation stem-loop lesions in the 5' noncoding region of poliovirus RNA: neuronal cell-specific translation defects.
... Sabin type 1 attenuated ...the 5 9 NCR, resulting perhaps in a less stable secondary or higher- order structure ...the 5 9 NCR is proposed to be an integral part of the IRES element of ... See full document
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Functional Dissection of a Poliovirus cis-Acting Replication Element [PV-cre(2C)]: Analysis of Single- and Dual-cre Viral Genomes and Proteins That Bind Specifically to PV-cre RNA
... containing 5% ...plus 1 l of radiolabeled RNA (7 nM) was incubated for 15 min at room temperature, after which aliquots were filtered at low negative pressure through prewetted nitrocellulose ... See full document
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Characterization of a murine coronavirus defective interfering RNA internal cis-acting replication signal.
... positive-strand RNA synthesis. We do not know whether the RNA secondary struc- tures predicted by the computer-based modeling are the same as those formed by actual RNA ...of RNA secondary ... See full document
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Poliovirus cis-Acting Replication Element-Dependent VPg Uridylylation Lowers the Km of the Initiating Nucleoside Triphosphate for Viral RNA Replication
... RF RNA when PIRCs containing KO CRE templates were incubated in labeling reaction mixtures containing 10 M UTP ...CRE RNA functioned efficiently as a tem- plate for negative-strand RNA synthesis ... See full document
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Identification of a cis-Acting Replication Element within the Poliovirus Coding Region
... The RNA sequence of PV3 Leon (PV3le) is shown below the numbering of the region in the full-length genome and above a line indicating base-paired stems in the ...the 5⬘ and 3⬘ (italics) portions of ... See full document
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An RNA Stem-Loop within the Bovine Coronavirus nsp1 Coding Region Is a cis-Acting Element in Defective Interfering RNA Replication
... stem-loop region (32, 47, 48) and the poly(A) tail (42) have been shown to be ...The cis-acting functions of the 3 ⬘ UTR elements may be common among the group 2 coronaviruses, since the BCoV DI ... See full document
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Stem-Loop IV in the 5′ Untranslated Region Is a cis-Acting Element in Bovine Coronavirus Defective Interfering RNA Replication
... the 5 ⬘ UTR had been noted (40) and the mfold program predicted a stem-loop IV homolog with small variations (stem- loop IV is identical among BCoV, HECoV, and HEV and is identical among MHV-2, MHV-A59, and ... See full document
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A Viral Noncoding RNA Generated by cis-Element-Mediated Protection against 5′→3′ RNA Decay Represses both Cap-Independent and Cap-Dependent Translation
... negative-strand RNA synthe- sis, because SR1f contains promoter sequences in the 3 ⬘ end conserved between RNA1 and RNA2, which are essential for ...FIG. 5. Seq1f58 protects its downstream nucleotide ... See full document
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Poliovirus 5′-Terminal Cloverleaf RNA Is Required in cis for VPg Uridylylation and the Initiation of Negative-Strand RNA Synthesis
... Proximal RNA termini: a common strategy for RNA animal viruses? RNA animal viruses appear to utilize communication between the 5⬘ and 3⬘ termini of their viral RNAs as a common strategy to ... See full document
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Role of the Hepatitis C Virus Core+1 Open Reading Frame and Core cis-Acting RNA Elements in Viral RNA Translation and Replication
... core region encompassing RNA elements SL47 and SL87 (44, 48, ...for RNA stability but play important roles in RNA ...these RNA elements may be important for the regulation of HCV IRES ... See full document
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Replication-competent picornaviruses with complete genomic RNA 3' noncoding region deletions.
... picornavirus, poliovirus type 1 ...intact RNA 3 9 NCRs may be required for efficient viral replication, they are not ...-terminal RNA sequences (or secondary structures) can be ... See full document
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