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[PDF] Top 20 “Calling Cards” for DNA-Binding Proteins in Mammalian Cells

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“Calling Cards” for DNA-Binding Proteins in Mammalian Cells

“Calling Cards” for DNA-Binding Proteins in Mammalian Cells

... map calling cards locations (Harris et ...the binding of the TF to DNA, or preclude other cofactors from binding to ...the binding site of a TF may alter expression of the nearby ... See full document

16

An 85-kilodalton herpes simplex virus type 1 alpha trans-induction factor (VP16)-VP13/14 fusion protein retains the transactivation and structural properties of the wild-type molecule during virus infection.

An 85-kilodalton herpes simplex virus type 1 alpha trans-induction factor (VP16)-VP13/14 fusion protein retains the transactivation and structural properties of the wild-type molecule during virus infection.

... The C-terminal 79 amino acids of the herpes simplex virus regulatory protein, Vmw65, efficiently activate transcription in yeast and mammalian cells in chimeric DNA-binding proteins.. Cr[r] ... See full document

8

Mammalian Argonaute-DNA binding?

Mammalian Argonaute-DNA binding?

... Argonaute proteins employ RNA guides and target other ...with DNA – has not been seriously considered, in part because the only role contemplated for DNA was as a guide strand, and in part because it ... See full document

11

Regulation of promoter occupancy during activation of cryptobiotic
embryos from the crustacean Artemia franciscana

Regulation of promoter occupancy during activation of cryptobiotic embryos from the crustacean Artemia franciscana

... transfected mammalian cells, we studied the existence of Artemia proteins from cryptobiotic cysts and developing nauplii, which could specifically bind to the putative regulatory regions in vitro, by ... See full document

9

Drosophila DNA-Binding Proteins in Polycomb Repression

Drosophila DNA-Binding Proteins in Polycomb Repression

... 192. Lynch, M.D.; Smith, A.J.; De Gobbi, M.; Flenley, M.; Hughes, J.R.; Vernimmen, D.; Ayyub, H.; Sharpe, J.A.; Sloane-Stanley, J.A.; Sutherland, L.; et al. An interspecies analysis reveals a key role for unmethylated ... See full document

24

Expression of polyomavirus virion proteins by a vaccinia virus vector: association of VP1 and VP2 with the nuclear framework.

Expression of polyomavirus virion proteins by a vaccinia virus vector: association of VP1 and VP2 with the nuclear framework.

... To determine whether VP1, VP2, and VP3 accumulate in the nuclei of polyomavirus-infected cells by binding singularly to the nuclear matrix or by associating with viral proteins or DNA al[r] ... See full document

10

Targeting deubiquitinating enzymes in cancer stem cells

Targeting deubiquitinating enzymes in cancer stem cells

... CSC-related proteins determine the difference in CSCs and the maintenance of ...target proteins in Table ...cancer cells or cancer stem ...stem cells and differenti- ated cancer cells ... See full document

6

Cytokine regulation of human immunodeficiency virus type 1 gene expression in cells of neural origin

Cytokine regulation of human immunodeficiency virus type 1 gene expression in cells of neural origin

... fragment that did not contain any unnecessary LTR sequences (the Taq I site at the 3' end n ef is 3 nucleotides past the stop codon); and two, pSVL/te/S, which contained the truncated n e f gene from BH10 which does not ... See full document

351

Roles of gastric GATA DNA binding proteins

Roles of gastric GATA DNA binding proteins

... the DNA-binding site of the GATA-binding protein (Yang and Evance, 1992), phosphorylation and dephosphorylation near the second finger of GATA-GT1 and GATA-GT2 may affect their DNA ... See full document

8

Complete Labelling of Pneumococcal DNA-Binding Proteins with

Complete Labelling of Pneumococcal DNA-Binding Proteins with

... proteins, namely the relaxase domain of MobM protein from plasmid pMV158, and the RelB-RelE.. 23.[r] ... See full document

20

Identification of Fucose-α(1-2)-Galactose Binding Proteins in the Mammalian Brain

Identification of Fucose-α(1-2)-Galactose Binding Proteins in the Mammalian Brain

... the binding interactions of these lectins with Fucα(1- 2)Gal glycans in ...their binding specificities for Fucα(1-2)Gal were assessed using carbohydrate microarrays from the Consortium of Functional ... See full document

159

Towards development of aptamers that specifically bind to lactate dehydrogenase of Plasmodium falciparum through epitopic targeting

Towards development of aptamers that specifically bind to lactate dehydrogenase of Plasmodium falciparum through epitopic targeting

... promising binding characteristics were selected and included 4 aptamers against rLDH and 5 against the LDHp ...and binding of aptamers to Plasmodium LDH [23, ...the binding of aptamers to ... See full document

16

Generation and analysis of clonal IgM  and IgG producing human B cell lines expressing an anti DNA associated idiotype

Generation and analysis of clonal IgM and IgG producing human B cell lines expressing an anti DNA associated idiotype

... anti- DNA-associated idiotype is encoded preferentially by the VK1 gene family, and, in all probability, reflects a germ line gene-encoded framework ...the DNA-binding antibodies produced by B cell ... See full document

8

Prediction of DNA-binding proteins from relational features

Prediction of DNA-binding proteins from relational features

... binding proteins in general (datasets PD138, UD54, BD54, APO104) just captured conserved consensus patterns of different folds as ...of DNA-binding proteins (recall that minimum fre- ... See full document

11

DNA-binding proteins induced by herpes simplex virus type 2 in HEp-2 cells.

DNA-binding proteins induced by herpes simplex virus type 2 in HEp-2 cells.

... First, mock-infected cell DNA-binding proteins were concentrated from 0.1, 0.3, 0.5, and 1.0 M NaCl eluates from a denatured DNA-cellulose column and subjected to electrophoresis in adja[r] ... See full document

15

Thermolabile DNA binding proteins from cells infected with a temperature-sensitive mutant of adenovrius defective in viral DNA synthesis.

Thermolabile DNA binding proteins from cells infected with a temperature-sensitive mutant of adenovrius defective in viral DNA synthesis.

... B 0, Infection of monkey or human cells with type Mock-infected cell DNA binding proteins labeled with [3H]leucine; A, wild-type infected cell DNA 5 adenovirus results in the synthesis o[r] ... See full document

7

Expression systems for adenovirus late proteins

Expression systems for adenovirus late proteins

... Adenovirus DNA replication facilitates binding of the MLTFIUSF transcription factor to the viral major late promoter within infected cells.. Electrophoretic transfer of proteins from pol[r] ... See full document

245

DNA-binding proteins in the cytoplasm of vaccinia virus-infected mouse L-cells.

DNA-binding proteins in the cytoplasm of vaccinia virus-infected mouse L-cells.

... PAGE analysis of labeled polypeptides the radioactive proteins present in extracts prepresent in cytoplasmic extracts from infected pared from control cells eluted in this fraction and m[r] ... See full document

11

Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae

Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae

... the proteins required for glycogen biosynthesis and glycogen degradation are present, suggesting that it can survive for a longer period under carbohydrate starvation con- ... See full document

18

A MADS-Box Homologue in Ustilago maydis Regulates the Expression of Pheromone-Inducible Genes but Is Nonessential

A MADS-Box Homologue in Ustilago maydis Regulates the Expression of Pheromone-Inducible Genes but Is Nonessential

... The family of MADS-box proteins includes, in addi- tion to Mcmlp, several plant and mammalian transcrip- tion factors that share a conserved DNA binding and dimerization do[r] ... See full document

10

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