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[PDF] Top 20 Chicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genome

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Chicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genome

Chicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genome

... Science (Korea). Oligonucleotide Primer set for PCR amplification of each identified GGERV10 locus was designed through Primer3 (http://bioinfo.ut.ee/pri mer3-0.4.0/primer3/) and Oligocalc (http://www.basic. ... See full document

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Avian Endogenous Retrovirus EAV-HP Shares Regions of Identity with Avian Leukosis Virus Subgroup J and the Avian Retrotransposon ART-CH

Avian Endogenous Retrovirus EAV-HP Shares Regions of Identity with Avian Leukosis Virus Subgroup J and the Avian Retrotransposon ART-CH

... novel endogenous retrovirus elements in the chicken genome, designated EAV-HP, with close sequence identity to the env gene of avian leukosis virus (ALV) subgroup J has been reported ...the ... See full document

11

OVEX1, a novel chicken endogenous retrovirus with sex specific and left right asymmetrical expression in gonads

OVEX1, a novel chicken endogenous retrovirus with sex specific and left right asymmetrical expression in gonads

... The genomic organization of simple retroviruses is ...the genome, giving rise over long periods of time to a family of related ERV elements, most of them inacti- vated by mutations (for a review, see ... See full document

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Endogenous retrovirus EAV HP linked to blue egg phenotype in Mapuche fowl

Endogenous retrovirus EAV HP linked to blue egg phenotype in Mapuche fowl

... EAV-HP retrovirus lacks a pol domain, rendering it self- replication defective [20], and so it would likely require an infecting virus acting in trans for it to ...the genome as has been demonstrated ... See full document

9

In vitro analysis of a primary, major histocompatibility complex (MHC)-restricted, cytotoxic T-lymphocyte response to avian leukosis virus (ALV), using target cells expressing MHC class I cDNA inserted into a recombinant ALV vector.

In vitro analysis of a primary, major histocompatibility complex (MHC)-restricted, cytotoxic T-lymphocyte response to avian leukosis virus (ALV), using target cells expressing MHC class I cDNA inserted into a recombinant ALV vector.

... various chicken lines to this retrovirus-induced ...a retrovirus vector that ex- pressed the necessary viral ...the chicken BFIV class I MHC genes to function in CTL ... See full document

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Identification and characterisation of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in chicken whole genome sequencing data

Identification and characterisation of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in chicken whole genome sequencing data

... full genome alignment files for each dataset showed no supportive read evidence for either integration, supporting the loss of both sites due to allelic dropout in the sequencing ... See full document

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Assessment of Immunocompetence Status of Native Breed of Chickens

Assessment of Immunocompetence Status of Native Breed of Chickens

... Clean and sterilized glass plate was placed on leveled horizontal surface. The edges prepared with glass strips at the borders were sealed with agar. About 50 ml of 0.1 M Tris - HCl was divided equally into two halves. ... See full document

9

Implementation of Data Mining to Predict Food Sales Rate Method using Apriori

Implementation of Data Mining to Predict Food Sales Rate Method using Apriori

... of the rules of the association formed in Figure 7 generates a rule that if a customer ordered Gyoza Saikoro Yakimeshi and then would order Chicken Teriyaki Don with the highest confiden[r] ... See full document

7

Wolbachia Influences the Maternal Transmission of the gypsy Endogenous Retrovirus in Drosophila melanogaster

Wolbachia Influences the Maternal Transmission of the gypsy Endogenous Retrovirus in Drosophila melanogaster

... IMPORTANCE Animals have established complex relationships with bacteria and viruses that spread horizontally among individ- uals or are vertically transmitted, i.e., from parents to offspring. It is well established that ... See full document

10

Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

... Figure 2. Distribution of universal BAC clones along chicken chromosomes. Each rectangle represents a chicken chromosome and the lines inside the location of each BAC clone. BAC clones are colored ... See full document

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Reverse transcriptase activity in chicken embryo fibroblast culture supernatants is associated with particles containing endogenous avian retrovirus EAV-0 RNA.

Reverse transcriptase activity in chicken embryo fibroblast culture supernatants is associated with particles containing endogenous avian retrovirus EAV-0 RNA.

... primary chicken embryo fibroblast (CEF) cultures which were produced from 11-day-old chicken embryos of specific-pathogen-free flocks and inoculated with seed ... See full document

8

Dissecting the Genomic Architecture of Resistance to Eimeria maxima Parasitism in the Chicken

Dissecting the Genomic Architecture of Resistance to Eimeria maxima Parasitism in the Chicken

... Real- Time PCR Detection System (Bio-Rad Laboratories, Hercules, CA, United States), was used to amplify each sample in triplicate (Nolan et al., 2015), with an additional Bead-Beater homogenization step prior to buffer ... See full document

13

Effects of in ovo electroporation on endogenous gene expression: genome-wide analysis

Effects of in ovo electroporation on endogenous gene expression: genome-wide analysis

... Typically, the construct used for in ovo electropora- tion contains the gene of choice along with green fluor- escent protein (GFP), or another marker, in order to identify the cells that have taken up the construct. A ... See full document

13

Genomic presence of recombinant porcine endogenous retrovirus in transmitting miniature swine

Genomic presence of recombinant porcine endogenous retrovirus in transmitting miniature swine

... porcine endogenous retrovirus (PERV) in human cell lines suggests a potential infectious risk in ...porcine genomic DNA that may have resulted from autoinfection following exogenous viral ... See full document

6

Genetical Genomics of Behavior: A Novel Chicken Genomic Model for Anxiety Behavior

Genetical Genomics of Behavior: A Novel Chicken Genomic Model for Anxiety Behavior

... a genome-wide 20% P-value cutoff threshold was used [prin- cipally due to being more conservative than the standard suggestive threshold (Lander and Kruglyak ...(5% genome-wide), while the suggestive ... See full document

36

Somite formation in the chicken embryo

Somite formation in the chicken embryo

... Abbreviations used in this paper: AP, antero-posterior; PSM, presomitic mesoderm. all the lineages derived from the somites (Le Douarin, 1969). The description of highly sensitive protocols for in situ hybridization has ... See full document

7

Common mechanism of retrovirus activation and transduction of c-mil and c-Rmil in chicken neuroretina cells infected with Rous-associated virus type 1.

Common mechanism of retrovirus activation and transduction of c-mil and c-Rmil in chicken neuroretina cells infected with Rous-associated virus type 1.

... 7 Common Mechanism of Retrovirus Activation and Transduction of c-mil and c-Rmil in Chicken Neuroretina Cells Infected with Rous-Associated Virus Type 1 MARIE-PAULE FELDER, ALAIN EYCHENE[r] ... See full document

8

Expression of endogenous avian myeloblastosis virus information in different chicken cells.

Expression of endogenous avian myeloblastosis virus information in different chicken cells.

... [3H]cDNAAMV was hybridized to total cell RNA extracted from bone marrow, bursa, and yolk sac cells of chicks or chicken embryos of different ages.. The hybridization condition was the sa[r] ... See full document

9

Identification and Characterization of Novel Human Endogenous Retrovirus Families by Phylogenetic Screening of the Human Genome Mapping Project Database

Identification and Characterization of Novel Human Endogenous Retrovirus Families by Phylogenetic Screening of the Human Genome Mapping Project Database

... (iv) HERV.XA. Members of the HERV.XA family are present at low copy numbers (16 per haploid genome) in hu- mans and are related to HERV.H. Similar viruses have been identified in the Old and New World monkeys, ... See full document

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Effects Of Sodium Acetate Dietary Supplementation On The Serum Lipid Profile Of Gallus Domesticus

Effects Of Sodium Acetate Dietary Supplementation On The Serum Lipid Profile Of Gallus Domesticus

... mean variations of the serum very low- density lipoproteins in broiler chicken, following administration of sodium acetate dietary supplementation at varying ...the chicken serum very low- density ... See full document

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