[PDF] Top 20 Detection of Single Nucleotide Polymorphisms
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Detection of Single Nucleotide Polymorphisms
... repeat polymorphisms (SSRPs), the highly informative microsatellite markers, were much more easily developed by probing genomic libraries with synthetic oligonucleotides bearing the simple sequence repeat motifs ... See full document
19
Multiplex PCR and Oligonucleotide Microarray for Detection of Single Nucleotide Polymorphisms Associated with Plasmodium falciparum Drug Resistance
... specific single-nucleotide polymorphisms (SNPs) in parasite genes, molecular markers are becoming useful surrogates for monitoring the emergence and dispersion of drug ...the detection of ... See full document
8
DETECTION SINGLE NUCLEOTIDE POLYMORPHISMS IN UROMODULIN PROMOTER REGION ASSOCIATED WITH RENAL DISEASES USING SINGLE STRAND CONFORMATION POLYMORPHISM POLYMERASE CHAIN POLYMORPHISMS TECHNIQUE
... The amplified fragments were purified using the protocol suggested by Macrogen sequencing company (Macrogen - Korea), and then, they were sequenced using each primer pair. The sequences of the gene fragments analyzed ... See full document
5
Nano-enabled bioanalytical approaches to ultrasensitive detection of low abundance single nucleotide polymorphisms
... ultrasensitive detection of attomolar DNA using single5particle detection ...for single particle ...Simultaneous detection of HIV51 (green) and HIV52 ... See full document
53
Single Nucleotide Polymorphisms on the Road to Strain Differentiation in Mycobacterium ulcerans
... the detection of single nucleotide polymorphisms (SNPs) in these ISEs that made genetic distinction within haplotypes and on a regional level ... See full document
6
Detection of three closely located single nucleotide polymorphisms in the EAAT2 promoter: Comparison of single strand conformational polymorphism (SSCP), pyrosequencing and Sanger sequencing
... SSCP was performed as previously described [8]. PCR samples were resolved on 0.5× acrylamide gels containing 12.5 ml MDE® (Mutation Detection Enhancement) gel solution (Lonza Group Ltd., Basel, Switzerland), 3 ml ... See full document
12
Single-nucleotide polymorphisms of microRNA processing machinery genes are associated with risk for gastric cancer
... The miR-SNPs of the miRNA processing gene, includ- ing XPO5 (rs11077), RAN (rs14035), Dicer (rs3742330), TNRC6B (rs9623117), GEMIN3 (rs197412), and GEMIN4 (rs2740348), according to the National Center for Biotech- nology ... See full document
5
Single-nucleotide polymorphisms of microRNA processing machinery genes and risk of colorectal cancer
... ligase detection reaction assay that amplify the DNA frag- ment flanking miR-SNPs basing on the sequence in the NCBI SNP database ...USA). Polymorphisms were confirmed based on the length difference of ... See full document
5
Evaluation of single nucleotide polymorphisms of Pro12Ala in peroxisome proliferator-activated receptor-γ and Gly308Ala in tumor necrosis factor-α genes in obese Asian Indians: a population-based study
... heterozygous polymorphisms suggests possible importance of these ...homozygous polymorphisms and the absolute number of AB polymorphisms in cases and controls was small, we sug- gest studies with ... See full document
8
Single Nucleotide Polymorphisms: A Window into the Informatics of the Living Genome
... on single nucleotide polymorphisms (SNPs), we explore a biophysical perspective on the genome as the most sophisticated living “information and communication system” known to ... See full document
5
Nucleotide binding oligomerization domain containing 1 (NOD1) haplotypes and single nucleotide polymorphisms modify susceptibility to inflammatory bowel diseases in a New Zealand caucasian population: a case control study
... bowel diseases [4]. Previous data associating NOD1 poly- morphisms with IBD risk showed variable results. Zouali, et al., [5], with European subjects, and Ozen et al., [15] with Turkish patients, concluded that NOD1 was ... See full document
9
Evidence for single nucleotide polymorphisms and their association with bipolar disorder
... polymorphisms linked to the disease. However, the results so far have been inconsistent across the studies, possibly due to differences between the populations analyzed, limited sample sizes with insufficient ... See full document
10
Porcine single nucleotide polymorphisms and their functional effect: an update
... The porcine variation currently reported in National Center for Biotechnology Information (NCBI) genetic variation database (dbSNP) and the European Vari- ation Archive (EVA) represents several diverse pig breeds and ... See full document
6
The Matrix Coalescent and an Application to Human Single-Nucleotide Polymorphisms
... For such histories, we use the “uniformization” algo- sites with varying levels of linkage, but likelihood-ratio rithm of Stewart (1994, Chap. 8), to evaluate equation tests can take varying sample sizes into account. 5 ... See full document
10
<p>Protective Association of Single Nucleotide Polymorphisms rs1861868-FTO and rs7975232-VDR and Obesity in Saudi Females</p>
... The pathophysiology of obesity is not well understood. However, it has been determined that multiple genetic and environmental factors are involved. The interaction of these multiple factors is the most essential element ... See full document
7
Single Nucleotide Polymorphisms of FCRL3 in Iranian Patients with Behcet’s Disease
... In recent years special attention is paid to studies concerning the FCRL3 gene polymorphisms (7). FCRL3 is a cell surface protein homologous to Fc receptors (FcRs) that in humans is encoded by the FCRL3 gene. This ... See full document
7
ABCB1 and ABCC1 single-nucleotide polymorphisms in patients treated with clozapine
... rs212090 single-nucleotide polymorphisms (SNPs) on CZ serum level, clinical outcome, and changes in body mass index (BMI) in the first year of CZ ...These polymorphisms influenced baseline BMI ... See full document
8
<p>Association between single nucleotide polymorphisms of <em>NOTCH</em> signaling pathway-related genes and the prognosis of NSCLC</p>
... rs915894 in the NOTCH4 gene was signi fi cantly asso- ciated with a better prognosis of NSCLC when compared with AA genotypes, whereas we did not observe a signi fi - cant association between other SNPs selected and the ... See full document
11
Identification of functional single nucleotide polymorphisms in the branchpoint site
... Background: The human genome contains millions of single nucleotide polymorphisms (SNPs); many of these SNPs are intronic and have unknown functional significance. SNPs occurring within intron ... See full document
6
Picking single nucleotide polymorphisms in forests
... high-throughput single-nucleotide polymorphism (SNP) technologies, the vast number of SNPs in smaller samples poses a challenge to the application of classical statistical ... See full document
5
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