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[PDF] Top 20 Horizontal Gene Transfer of Functional Type VI Killing Genes by Natural Transformation

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Horizontal Gene Transfer of Functional Type VI Killing Genes by Natural Transformation

Horizontal Gene Transfer of Functional Type VI Killing Genes by Natural Transformation

... ABSTRACT Horizontal gene transfer (HGT) can have profound effects on bacterial evolution by allowing individuals to rapidly acquire adaptive traits that shape their strategies for ... See full document

11

Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes

Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes

... that natural trans- formation is a major mechanism in the evolution of ...evolved. Natural transformation is the process whereby bacte- rial cells take up free DNA from the environment and incorpo- ... See full document

10

Novel “Superspreader” Bacteriophages Promote Horizontal Gene Transfer by Transformation

Novel “Superspreader” Bacteriophages Promote Horizontal Gene Transfer by Transformation

... above-mentioned natural transformation experiments, we observed an abundant, ...plasmid transformation and antibiotic resistance transfer in heteroge- neous populations of soil ...turbidity). ... See full document

12

An investigation of horizontal transfer of feed introduced DNA to the aerobic microbiota of the gastrointestinal tract of rats

An investigation of horizontal transfer of feed introduced DNA to the aerobic microbiota of the gastrointestinal tract of rats

... filter transformation assays, ...ribosomal gene sequences (Figure ...for natural transformation, available marine isolates of the Gammaproteobacteria, Actinobacteria and Alphaproteo- bacteria ... See full document

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Native Plasmid-Encoded Mercury Resistance Genes Are Functional and Demonstrate Natural Transformation in Environmental Bacterial Isolates

Native Plasmid-Encoded Mercury Resistance Genes Are Functional and Demonstrate Natural Transformation in Environmental Bacterial Isolates

... p5343-encoded genes are closest to Alphaproteobacteria, the strains that were transformed belong to Betaproteobacteria, Gammaproteobacteria, and ...positives. Natural competence is a transient physiological ... See full document

12

Interkingdom gene fusions

Interkingdom gene fusions

... Examples of phylogenetic trees supporting the contribution of interkingdom horizontal gene transfer to the emergence of interkingdom domain fusions. The names of proteins from different primary ... See full document

13

The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early branching nematodes

The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early branching nematodes

... Open Reading Frames (ORFs) were predicted in both transcriptomes using a custom pipeline developed to more faithfully predict 5 0 start codons. Initially, TransDecoder 2.0.1 [31] was used to predict ORFs encoded by the ... See full document

17

Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer

Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer

... that gene loss on average outweighs gene gain caused by HGT as well as duplication followed by neo/subfunctionalization (the latter process being relatively less important in ...the gene gain rate. ... See full document

15

Fungal clones win the battle, but recombination wins the war

Fungal clones win the battle, but recombination wins the war

... There is a perception that groups of fungi known only from their mitotic stage are clonal until proven otherwise. Organisms known only from their mitotic stage, such as Fusarium oxysporum f.sp. cubense tropical race 4 of ... See full document

6

Horizontal gene transfer and evolution of antibiotic gene clusters

Horizontal gene transfer and evolution of antibiotic gene clusters

... chromosomally-located antibiotic genes diverse in found been has of a set streptomycin pathway-specific regulator, strR, been have both that already previously streptomycetes phenotypica[r] ... See full document

223

Determination of the Frequency of Adhesion Virulence Factors in Uropathogenic E. coli (UPEC) Strains Isolated from Hospitalized Patients in Babol

Determination of the Frequency of Adhesion Virulence Factors in Uropathogenic E. coli (UPEC) Strains Isolated from Hospitalized Patients in Babol

... fimH gene in E.coli strains [7-9]. Moreover, the papC gene with ...iucC gene, which is responsible for the synthesis of the hydroxamate siderophore, and the other adhesion factor, sfa/foc ... See full document

7

Phylogenetic analysis of the core histone doublet and DNA topo II genes of Marseilleviridae: evidence of proto-eukaryotic provenance

Phylogenetic analysis of the core histone doublet and DNA topo II genes of Marseilleviridae: evidence of proto-eukaryotic provenance

... Phylogenetic analysis in Fig. 1a was conducted by the maximum likelihood (ML) method and the Le and Gas- cuel [8] amino acid substitution model [48]. Phylogenetic analysis in Fig. 1b was conducted using the neighbor- ... See full document

11

The Tip of the VgrG Spike Is Essential to Functional Type VI Secretion System Assembly in Acinetobacter baumannii

The Tip of the VgrG Spike Is Essential to Functional Type VI Secretion System Assembly in Acinetobacter baumannii

... Finally, it is noteworthy that we found an inactivating mutation of the T6SS in a clinical isolate. Although we cannot say with certainty whether this mutation was acquired during culturing or in the human host, it is ... See full document

14

Horizontal gene transfer is not a hallmark of the human genome

Horizontal gene transfer is not a hallmark of the human genome

... human genes that were originally reported as having undergone bacterial- vertebrate transfer (BVT), a finding that has been rejected by our work [3] and that of others [4, 5], but re-claimed by Crisp et ... See full document

5

An experimental study of natural convection heat transfer to non-Newtonian fluids in confined horizontal layers.

An experimental study of natural convection heat transfer to non-Newtonian fluids in confined horizontal layers.

... for natural convection can be found by the application of the principle of similarity in either of the above methods and the method of dimensional analysis is worked out in detail in Appendix ... See full document

115

Biological systems of the host cell involved in Agrobacterium infection

Biological systems of the host cell involved in Agrobacterium infection

... The diameter of the mature T-complex (c. 15 nm) (Abu- Arish et al., 2004) substantially exceeds the diffusion size exclusion limit of the nuclear pore complex (NPC) (9 nm), indicating that T-complexes enter the cell ... See full document

12

What are karrikins and how were they ‘discovered’ by plants?

What are karrikins and how were they ‘discovered’ by plants?

... Measurements of karrikins in soil are technically very challenging but seed-germination bioassays can be used to detect activity, one study suggesting that active compound(s) can persist in the soil for over seven years ... See full document

7

Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome

Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome

... key genes involved in these pro- ...the genes necessary for gluconeogene- sis. HIMB11 harbors genes for the Entner- Doudoroff and pentose phosphate pathways, as well as pyruvate carboxylase to ... See full document

14

Prevalence of class 1 and 2 integrons in multi-drug resistant Escherichia coli isolated from aquaculture water in Chaharmahal Va Bakhtiari province, Iran

Prevalence of class 1 and 2 integrons in multi-drug resistant Escherichia coli isolated from aquaculture water in Chaharmahal Va Bakhtiari province, Iran

... Development of antimicrobial resistance in microorgan- isms has been attributed to indiscriminate use of antibiot- ics which poses serious public health concern worldwide [1]. Multi drug resistant strains of Escherichia ... See full document

5

Stochastic Models for Horizontal Gene Transfer

Stochastic Models for Horizontal Gene Transfer

... multiple gene trees given an unknown species ...subtree transfer operations, in particular the SPR operator that mirrors the observed effects that HGT has on an inferred ... See full document

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