[PDF] Top 20 Two- and Three-Locus Tests for Linkage Analysis Using Recombinant Inbred Lines
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Two- and Three-Locus Tests for Linkage Analysis Using Recombinant Inbred Lines
... reconsidered two- and three-locus statistics in RILs and extensions thereof, assuming all alleles to be ...the two-locus recombination fraction, one can estimate the recombination rate ... See full document
9
Quantitative trait locus analysis of resistance to panicle blast in the rice cultivar Miyazakimochi
... trait locus (QTL) analysis of 158 recombinant inbred lines using 112 developed genome-wide and 35 previously reported polymerase chain reaction (PCR) markers revealed the ... See full document
11
Linkage Analysis of Molecular Markers and Quantitative Trait Loci in Populations of Inbred Backcross Lines of Brassica napus L.
... marker locus: Not all loci were homozygous in the recurrent ...a locus (Table A2). Thus, exact determination of all possible two-point comparisons in these populations requires 11 3 11 5 121 ... See full document
16
Molecular and biochemical analysis of aroma in CSR10 x Taraori basmati derived Recombinant Inbred Lines
... PCR amplifications were performed using PTC – 100 TM 96V thermocycler (MJ Research, Inc., Watertown, MA, USA) and Taq DNA polymerase. The PCR reaction was conducted in a reaction volume of 25µl containing 10XPCR ... See full document
6
Signatures of Dobzhansky–Muller Incompatibilities in the Genomes of Recombinant Inbred Lines
... of recombinant inbred lines (RILs) from two divergent inbred parents certain genotype (or epigenotype) combinations may be functionally “incompatible” when brought together in the ... See full document
26
Loop Nucleotide Polymorphism in a Putative miRNA Precursor Associated with Seed Length in Rice (Oryza sativa L.)
... By using high-resolution melting (HRM) analysis, we measured the polymorphisms in a RIL (recombinant inbred lines) population derived from japonica variety Koshihikari and indica ... See full document
9
Genetic analysis of recombinant inbred lines of wheat for resistance to karnal bunt (neovossia indica) using issr markers
... generated using only 25 ...per locus ranged from 4-14 with an average of ...per locus. The two parents were genetically diverse (similarity coefficient ...cluster analysis led to ... See full document
5
The Genomes of Recombinant Inbred Lines
... for two-way RILs by selfing. For both no inter- CCC (the three-locus, X chromosome diplotype of the ference and strong positive interference, the coinci- female parent and the ... See full document
14
Two-locus linkage analysis using recombinant inbred strains and Bayes' theorem.
... This paper addresses five problems associated with the use of RI strains for linkage analysis: the proba- bility of linkage of a test locus to a marker locus given i mismat[r] ... See full document
8
Three-locus linkage analysis using recombinant inbred strains and Bayes' theorem.
... This method further increases the power of RI strains to detect linkage and gives estimations of the probability of each of the three possible gene orders if the test locus [r] ... See full document
8
Identification of QTLs for Blast, Bacterial Blight, and Planthopper Resistance Using SNP Based Linkage Maps from Two Recombinant Inbred Rice Lines
... DOI: 10.4236/ajps.2019.105056 765 American Journal of Plant Sciences for BB resistance evaluation at the UBN-RRC, SKN-RRC, and RRE-RRC in the wet season (Figure 1). The isolate was grown in nutrient agar media for 72 ... See full document
20
Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays
... MM lines can achieve high mapping ...1,000 lines, yet a preliminary comparison with 500 MM lines provides interesting ...NAM lines have an average mapping power of around 50%, while an MM ... See full document
23
Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations
... of linkage disequilibrium (LD) along a ...case-control tests, including a novel haplotype test based on contrasting LD between affected and unaffected ...single-marker tests and haplotype-based ... See full document
12
Genetic Diversity and Relationships of Agronomic Characters in Wheat Recombinant Inbred Lines
... wheat lines with optimal characteristics and to determine the traits which could be used as the selection index for increasing of grain yield, 40 recombinant inbred lines (RILs) derived from a ... See full document
5
Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms.
... Our assumption of two duplicate loci was later confirmed by linkage analysis, and the two duplicate loci were placed on our maize RFLP linkage map; locus 59 is located [r] ... See full document
11
Evaluation of Wheat Recombinant Inbred Lines for heat tolerance and variability
... in two contrasting seasons that is in the normal season during Rabi (November- December to April-May) as winter crop and during off season (June-July to October) as summer ...by using dimethyl sulphoxide ... See full document
7
GENETICS OF GLUCOCORTICOID RECEPTOR LEVELS IN RECOMBINANT INBRED LINES OF MICE
... Using a series of Student’s t-tests performed only on the RI lines (since parental lines would have a larger effect than each RI line), it was found for all three markers[r] ... See full document
10
Genotype Probabilities at Intermediate Generations in the Construction of Recombinant Inbred Lines
... eight-way recombinant inbred lines (RIL): eight diverse parental strains are intermated, followed by repeated sibling mating, many times in parallel (see Figure 1D), to create a new set of ... See full document
37
Selection of maize inbred lines and gene expression for resistance to ear rot.
... Diallel analysis may be an alternative for studying genetic inheritance of characteristics that are controlled both by nuclear genes and maternal or extrachromosomal ... See full document
21
Molecular mapping of qBK1WD, a major QTL for bakanae disease resistance in rice
... and three tetra markers to narrow down the position of the qBK1 WD ...uses two locus-specific outer primers that asymmetrically flank the SNP under investigation and two allele-specific inner ... See full document
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