[PDF] Top 20 Observation of intermittency in gene expression on cDNA microarrays
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Observation of intermittency in gene expression on cDNA microarrays
... positive, with an average value of 0.03-0.04, indicative of intermittency in the data. The greatest signals were observed in the experiments for sporulation (spo0 array) and diauxic shift (diaua array). For the ... See full document
6
Expression of Respiratory Syncytial Virus-Induced Chemokine Gene Networks in Lower Airway Epithelial Cells Revealed by cDNA Microarrays
... chemokine expression in RSV-infected type II (A549) and bronchiolar (SAE) cells by high-density ...global gene expression changes in genetic networks activated by signal-transducing molecules (17), ... See full document
15
Whole-transciptome analysis of [psi+] budding yeast via cDNA microarrays
... the Gene Ontology ...the expression data ...the Expression Analysis Systematic Explorer ...and expression data, with the added benefit of a statistical confidence ... See full document
193
ORF57 Overcomes the Detrimental Sequence Bias of Kaposi's Sarcoma-Associated Herpesvirus Lytic Genes
... RNA expression of the multiple spliced K15 gene is enhanced by ...K15 gene mirrors cellular genes in the number of ...K15 expression requires the viral posttranscriptional activator ...the ... See full document
13
The effect of column purification on cDNA indirect labelling for microarrays
... quantitative gene expres- sion of two commercial human RNA samples was consid- erably consistent among platforms compared to reports in previous ...of gene expression ... See full document
8
Putative psychosis genes in the prefrontal cortex: combined analysis of gene expression microarrays
... diluted cDNA were mixed together and pipetted into sin- gle wells of the qPCR plate (384-well format) with the Prism7900HT Sequence Detection System (Applied Bio- systems, Foster City, ...each gene tested, ... See full document
14
Identification of ‘stress and Ca++ metabolism related gene expression’ in wild Peromyscus exposed to environmental lead using combinatorial data from Mus cDNA microarrays and blood metabolites
... The expression of genes of NADH dehydrogenase complex, the first enzyme of the mitochondrial elec- tron transport chain, also exhibited consistent differ- ential regulation from lead exposure to deer mice in the ... See full document
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Comparative gene expression profiles for highly similar aggressive phenotypes in male and female cichlid fishes (Julidochromis)
... a gene index annotation developed for the A. burtoni cDNA array (Renn et ...through gene lists rather than statistical comparison, due to the fact that no between-species hybridizations were ... See full document
10
Functional Genomics Investigation of Microbial Physiology in the Hyperthermophilic Microorganisms Pyrococcus furiosus and Thermotoga maritima
... Full genome cDNA microarrays were used to assess differential gene expression patterns in the hyperthermophilic archaeon Pyrococcus furiosus grown on a range of glucose- based carbohydr[r] ... See full document
230
Probe Design and Data Analysis for Gene Expression Microarrays
... estimated gene expression levels in comparison with those that were based on the observed ...estimated expression levels. When a gene with relatively high expression had a significant ... See full document
123
Identification of Schistosoma mansonigender associated gene transcripts by cDNA microarray profiling
... the expression of male-associated transcripts, although these molecules clearly exist ...the gene products expressed by adult male schistosomes may uncover molecules integral to female sexual ...identifying ... See full document
12
Highly Enhanced Expression of CD70 on Human T-Lymphotropic Virus Type 1-Carrying T-Cell Lines and Adult T-Cell Leukemia Cells
... oligonucleotide microarrays have been used to ex- amine gene expression patterns of PBMCs infected with HTLV-1 (11), HTLV-1-transformed T-cell lines (8, 30), Jurkat cells expressing either p12I (26) ... See full document
10
High throughput genomic technology in research and clinical management of breast cancer Molecular signatures of progression from benign epithelium to metastatic breast cancer
... (i.e. microarrays and ...of cDNA samples to immobilized probes on microarray slides, whereas the SAGE method generates a library of expressed genes by taking a raw count of sequence tags, each representing ... See full document
5
Comparative environmental genomics in non model species: using heterologous hybridization to DNA based microarrays
... studies to employ heterologous hybridization (Enard et al., 2002), arrays generated from either human oligonucleotide sequences (Affymetric U95A arrays) or longer cDNAs (~1000·bp) were used to characterize quantitative ... See full document
5
Complete gene expression profiling of Saccharopolyspora erythraea using GeneChip DNA microarrays
... in gene expression between core and non-core regions, but also in highlighting strand specific patterns of ...differential gene expression. The second observation concerns the ... See full document
15
Original Article Up-regulation of ECT2 is associated with poor prognosis in gastric cancer patients
... the expression of ECT2 in gastric cancer and its clinical significance in the devel- opment and progression of GC ...ECT2 gene showed more than 3-fold up-regula- tion in cancerous tissues in gene ... See full document
8
A microarray based transcriptomic time course of hyper and hypo osmotic stress signaling events in the euryhaline fish Gillichthys mirabilis: osmosensors to effectors
... or expression of the osmosensing and signal transduction genes that may govern their ...a cDNA microarray consisting of 9207 cDNA clones was used to monitor gene expression changes in ... See full document
14
A Survey on Introduction of Dna Chip
... The current DNA chip market runs as a device for detection of cancer. One of the biggest challenges in cancer treatment is choosing the right regimen for a given patient. Treatment strategies work differently for ... See full document
12
Expressogram: A Visualization of Cytogenetic Landscape in Cancer Samples Using Gene Expression Microarrays
... with gene expressions are not well ...and gene expressions using expression ...the gene expression signals detected by microar- ray probesets onto a reference human genome, the RefSeq, ... See full document
6
Identification of unique expression signatures and therapeutic targets in esophageal squamous cell carcinoma
... Total RNA was used as the template for amplification because of bias reduction compared to using mRNA template [23]. To ensure that all samples contained a similar overall representation of transcriptome, 50 ng of total ... See full document
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