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[PDF] Top 20 Use of pulsed field gel electrophoresis for epidemiological study of Bordetella pertussis in a whooping cough outbreak

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Use of pulsed field gel electrophoresis for epidemiological study of Bordetella pertussis in a whooping cough outbreak

Use of pulsed field gel electrophoresis for epidemiological study of Bordetella pertussis in a whooping cough outbreak

... We used pulsed-field gel electrophoresis PFGE of chromosomal DNA digested with XbaI to determine the distribution of different BordeteUa pertussis strains from clinical isolates obtained[r] ... See full document

5

Epidemiological Study of a Food Borne Outbreak of EnterotoxigenicEscherichia coli O25:NM by Pulsed Field Gel Electrophoresis and Randomly Amplified Polymorphic DNA Analysis

Epidemiological Study of a Food Borne Outbreak of EnterotoxigenicEscherichia coli O25:NM by Pulsed Field Gel Electrophoresis and Randomly Amplified Polymorphic DNA Analysis

... This study demonstrates that practical molecular biology- based epidemiological approaches can be used to identify the source and route of infection of food-borne ETEC poisoning in the ...biology-based ... See full document

5

Reproducibility of Bordetella pertussis Genomic DNA Fragments Generated by XbaI Restriction and Resolved by Pulsed Field Gel Electrophoresis

Reproducibility of Bordetella pertussis Genomic DNA Fragments Generated by XbaI Restriction and Resolved by Pulsed Field Gel Electrophoresis

... this study, we evaluated a standardized procedure for determination of the comparability of results within and be- tween ...for use as an internal reference in transforming DNA fragment migration distances ... See full document

6

Bordetella pertussis Strains Circulating in Europe in 1999 to 2004 as Determined by Pulsed Field Gel Electrophoresis

Bordetella pertussis Strains Circulating in Europe in 1999 to 2004 as Determined by Pulsed Field Gel Electrophoresis

... countries use different vaccination schedules and use at least partly different vaccines (Table ...For epidemiological characterization of B. pertussis isolates, various DNA-based techniques ... See full document

6

Good Performance of the SpectraCellRA System for Typing of Methicillin Resistant Staphylococcus aureus Isolates

Good Performance of the SpectraCellRA System for Typing of Methicillin Resistant Staphylococcus aureus Isolates

... this study, the performance (typeability, discriminatory power, reproducibility, workflow, and costs) of the SCRA system was evaluated for typing of MRSA strains isolated from patients and patients’ household ... See full document

5

Reference System for Characterization of Bordetella pertussis Pulsed Field Gel Electrophoresis Profiles

Reference System for Characterization of Bordetella pertussis Pulsed Field Gel Electrophoresis Profiles

... Pulsed-field gel electrophoresis (PFGE) has been used as an epidemiological tool for surveillance studies of Bordetella pertussis since the early ...B. pertussis ... See full document

8

Pulsed Field Gel Electrophoresis Analysis of Bordetella pertussis Isolates Circulating in Europe from 1998 to 2009

Pulsed Field Gel Electrophoresis Analysis of Bordetella pertussis Isolates Circulating in Europe from 1998 to 2009

... countries use different vaccination strategies against pertussis (11) (Table ...whole-cell pertussis vaccines have been re- placed by acellular vaccines in which only 1 to 5 protein compo- nents (in ... See full document

7

Antimicrobial susceptibility profiling and genomic diversity of Acinetobacter baumannii isolates: A study in western Iran.

Antimicrobial susceptibility profiling and genomic diversity of Acinetobacter baumannii isolates: A study in western Iran.

... published study of PFGE typing among the clinical strains of ...this study support the viewpoint indicating clonal spread as the main reason for the increasing trend of imipenem, meropenem resistance as ... See full document

8

Prospective Whole Genome Sequencing Enhances National Surveillance of Listeria monocytogenes

Prospective Whole Genome Sequencing Enhances National Surveillance of Listeria monocytogenes

... in outbreak detection and ...using pulsed-field gel electrophoresis (PFGE), multilocus sequence typing (MLST), multilocus variable-number tandem-repeat analysis (MLVA), binary typing, ... See full document

10

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... during epidemiological studies of outbreaks in hospitals or communities during a relatively short period of time (a few months), as we had in our ...our study PFGE has showed completely eff ... See full document

7

Subtyping of Haemophilus influenzaeStrains by Pulsed Field Gel Electrophoresis

Subtyping of Haemophilus influenzaeStrains by Pulsed Field Gel Electrophoresis

... In recent years, PFGE has become a useful tool for the typing and differentiation of strains for epidemiological studies with multiple bacterial species (5, 11, 14, 20). PFGE has been used for ... See full document

6

Use of a Chinese hamster ovary cell cytotoxicity assay for the rapid diagnosis of pertussis

Use of a Chinese hamster ovary cell cytotoxicity assay for the rapid diagnosis of pertussis

... Whooping cough diagnosis: a clinical evaluation ofcomplementing culture and immunofluorescence with enzyme-linked immunosorbent assay of pertussis immunoglobulin A in nasopharyngeal secr[r] ... See full document

7

Biochemical fingerprinting compared with ribotyping and pulsed field gel electrophoresis of DNA for epidemiological typing of enterococci

Biochemical fingerprinting compared with ribotyping and pulsed field gel electrophoresis of DNA for epidemiological typing of enterococci

... A main advantage of PhP typing is that it is simple to per- form, and data processing and presentation are automated. Less than 8 h of labor, in total, including data interpretation and presentation, is required to assay ... See full document

6

Development of a Multiplex PCR Based Rapid Typing Method for Enterohemorrhagic Escherichia coli O157 Strains

Development of a Multiplex PCR Based Rapid Typing Method for Enterohemorrhagic Escherichia coli O157 Strains

... a certain level of discrimination power can be expected, as we demonstrate in the present study. Second, the analysis can be performed without the need for special equipment or tech- niques, requiring only ... See full document

7

Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics

Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics

... Optical mapping. Optical maps for each isolate were prepared from cells of single 1-mm colony equivalents following growth on Regan-Lowe agar without cephalexin using the Argus system (OpGen, Gaithersburg, MD) according ... See full document

15

Evaluation of Pulsed Field Gel Electrophoresis as a Tool for Determining the Degree of Genetic Relatedness between Strains of Escherichia coli O157:H7

Evaluation of Pulsed Field Gel Electrophoresis as a Tool for Determining the Degree of Genetic Relatedness between Strains of Escherichia coli O157:H7

... farm environments and/or cattle herds associated with human cases have allowed investigators to establish relationships be- tween animal and human isolates (7, 16, 34, 68; W. B. Trevena, R. S. Hooper, C. Wray, G. A. ... See full document

7

Molecular Subtyping of Clostridium perfringens by Pulsed Field Gel Electrophoresis To Facilitate Food Borne Disease Outbreak Investigations

Molecular Subtyping of Clostridium perfringens by Pulsed Field Gel Electrophoresis To Facilitate Food Borne Disease Outbreak Investigations

... Our study showed PFGE to be superior to serotyping, which is the currently recommended method for providing laboratory links to epidemiologic ...one study (23) and in 10% of isolates in another ... See full document

6

Comparison of biotyping, ribotyping, and pulsed field gel electrophoresis for investigation of a common source outbreak of Burkholderia pickettii bacteremia

Comparison of biotyping, ribotyping, and pulsed field gel electrophoresis for investigation of a common source outbreak of Burkholderia pickettii bacteremia

... We report here on an outbreak of B. pickettii bacteremias at a 650-bed teaching hospital in Liege, Belgium. From June to August 1994, six immunocompromised patients developed B. pickettii bacteremia and/or ... See full document

6

Comparison of DNA Fingerprinting Methods for Use in Investigation of Type E Botulism Outbreaks in the Canadian Arctic

Comparison of DNA Fingerprinting Methods for Use in Investigation of Type E Botulism Outbreaks in the Canadian Arctic

... from outbreak strains using PFGE with both restriction ...from outbreak 1, which occurred in ...from outbreak 4 in Inuvik (isolates FE0005EJT and ...the outbreak strains, they originated from ... See full document

10

Specific immunoglobulin A to Bordetella pertussis antigens in mucosal secretion for rapid diagnosis of whooping cough

Specific immunoglobulin A to Bordetella pertussis antigens in mucosal secretion for rapid diagnosis of whooping cough

... The results indicate that determination of specific IgA to PT and FHA in NPH aspirates represents a sensitive and rapid diagnostic method for the detection of pertussis.... GRANSTROM ET [r] ... See full document

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