[PDF] Top 20 Recombination analysis based on the complete genome of bocavirus
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Recombination analysis based on the complete genome of bocavirus
... inter-genotype recombination events that occurred between HBoV1 and HBoV4, which lead to the recombinant cluster ...this recombination event was showed in Figure 2A, which used the lineages repre- sented by ... See full document
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Complete-Genome Phylogenetic Approach to Varicella-Zoster Virus Evolution: Genetic Divergence and Evidence for Recombination
... VZV genome sequences have recently identified a divergence of VZV into different genotypes and recombinant strains (25, 30, ...locus) analysis of VZV polymorphisms for a large number of clinical isolates ... See full document
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Characterization of the first complete genome sequence of an Impatiens necrotic spot orthotospovirus isolate from the United States and worldwide phylogenetic analyses of INSV isolates
... Putative recombination event among full-length INSV isolates of different geographic origin, predicted by the RDP ...software. Analysis of putative reassortment/recombination events using INSV ... See full document
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Western Equine Encephalitis Virus: Evolutionary Analysis of a Declining Alphavirus Based on Complete Genome Sequences
... accumulation of deleterious mutations, fitness declines, and lin- eage extinction events that could explain not only the lineage re- placements we observed but also the decline in WEEV genetic diversity. However, manual ... See full document
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Analysis and Characterization of the Complete Genome of Tupaia (Tree Shrew) Herpesvirus
... were based on those used in the sequence analysis of other herpesvi- ruses ...addition, analysis of codon usage, the presence of consensus promoter sequences, and homology to known genes were used to ... See full document
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Systems Based Analysis of the Sarcocystis neurona Genome Identifies Pathways That Contribute to a Heteroxenous Life Cycle
... S. neurona encodes a distinct set of SRS proteins. The SRS proteins exist as a developmentally regulated superfamily of par- asite surface adhesins within the tissue cyst-forming coccidia that promote host cell ... See full document
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Strategies for high-altitude adaptation revealed from high-quality draft genome of non-violacein producing Janthinobacterium lividum ERGS5:01
... genome based GGDH and ANI supported the clustering and confirmed the identity of strain as a non-violecin pro- ducing ...pan-genome analysis revealed an open-pan genome with the scope ... See full document
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Analysis of the genomic homologous recombination in Theilovirus based on complete genomes
... genomic recombination of ...and recombination analysis of Theilovirus over the complete ...significant recombination events were ...the recombination events might happen ... See full document
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Phylogenetic and recombination analysis of human bocavirus 2
... From July 2006 to June 2008 in Lanzhou, China, we col- lected stool samples from 632 hospitalized children with diarrhea and 162 asymptomatic children. 3-5 ml stool was collected from every participant. All subjects were ... See full document
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Complete genome sequence of Salinicoccus halodurans H3B36, isolated from the Qaidam Basin in China
... tree based on the 16S rRNA gene showing the position of Salinicoccus halodurans H3B36 relative to other species in the genus ...The analysis involved 18 nucleotide sequences, and there were a total of 1394 ... See full document
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Plastid genome and composition analysis of two medical ferns: Dryopteris crassirhizoma Nakai and Osmunda japonica Thunb.
... comparative analysis of complete plastid genome sequences ...plastid genome from different species have been ...plastid genome gene content and orientation are considerably conserved ... See full document
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Propeller Pitch Selection Based on Analysis of Existing Tugboats
... This work is aimed at obtaining the propeller pitch and diameter as a function of hull and machinery parameters at the early stage of design of tug boats. This work will also reduce the hydrodynamic iterative process ... See full document
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Analysis of chicken anemia virus genome: evidence of intersubtype recombination
... CAV genome, cloning and sequencing were carried out as pre- viously described, briefly, primers VP1F: 5 ’ AGCC- GACCCCGAACCGCAAGAA ’ 3 and VP1R: 5 ’ TCA GGG CTG CGT CCC CCA GTA CA ’ 3 were used to amplify the VP1 ... See full document
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A polarizing microscopic analysis of the calcified masses based on their collagen fibre orientation in peripheral ossifying fibroma
... Studies carried out with the help of polarizing microscope to decipher the presence of the kind of mineralized tissue has led to the finding of the definitive presence of cementum, bone, and a combination of the two. The ... See full document
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Analysis of Feasibility Meubel Industry Based on Water Hyacinth
... Fig 4:- export meuble indonesia based on raw materials Based on above data, opportunity in exporting meubel with material comes from water hyacinth still has wide opportunity. Only 5% industry ... See full document
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Genome sequences published outside of Standards in Genomic Sciences January — June 2011
... 143. Grinblat-Huse V, Drabek EF, Huot Creasy H, Daugherty SC, Jones KM, Santana-Cruz I, Tallon LJ, Read TD, Hatch TP, Bavoil P, et al. Genome sequences of the zoonotic pathogens Chlamydia psittaci 6BC and Cal10. J ... See full document
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Characterization of Hepatitis C Virus Recombination in Cameroon by Use of Nonspecific Next Generation Sequencing
... draft genome using Se-Al ...pleted genome sequence was created by mapping all the HCV-related reads back onto the draft genome using Stampy ...pleted genome was then subtyped using the ... See full document
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Analysis of the complete Fischoederius elongatus (Paramphistomidae, Trematoda) mitochondrial genome
... The circular mt genome of F. elongates includes 12 protein-coding genes (cox1-3, nad1-6, nad4L, cytb and atp6), 22 tRNA genes, two rRNA genes (rrnS and rrnL) and two non-coding regions (SNR and LNR). All the 12 ... See full document
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Distinct Biological Potential of Streptococcus gordonii and Streptococcus sanguinis Revealed by Comparative Genome Analysis
... To further support our classification results, we reconstructed a phylogenetic tree using core-genome Single Nucleotide Polymorphism (SNP) data, providing a more robust tree compared to the single gene approach. ... See full document
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Experimental Analysis of the Deviation from Circularity of Bored Hole Based on the Taguchi Method
... A new insert was used for each of the trial combinations to prevent the negative effects of insert wear. For each sample, the beginning and ending hole diameters were measured and recorded by Mitutoyo QM- 3D measuring ... See full document
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