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[PDF] Top 20 The zebra finch neuropeptidome: prediction, detection and expression

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The zebra finch neuropeptidome: prediction, detection and expression

The zebra finch neuropeptidome: prediction, detection and expression

... in zebra finch beha- viour, we used our genome-wide prohormone gene annotation to identify prohormone ESTs (Table 3) on the zebra finch brain SoNG microarray ...gene expression patterns ... See full document

17

OVEX1, a novel chicken endogenous retrovirus with sex specific and left right asymmetrical expression in gonads

OVEX1, a novel chicken endogenous retrovirus with sex specific and left right asymmetrical expression in gonads

... allowing detection of the rela- tionship between distant elements ...and zebra finch putative RTs (Gag-Pol polyprotein resi- dues 759 to 917) to that of representative retroviral ele- ments and ... See full document

24

Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus

Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus

... the zebra finch genome project http:// ...the detection of selec- tion on a wider ...and zebra finch have been fixed by positive selection [8], so by comparing coding sequences (CDS) ... See full document

13

Learning to cope with degraded sounds: female zebra finches can improve their expertise in discriminating between male voices at long distances

Learning to cope with degraded sounds: female zebra finches can improve their expertise in discriminating between male voices at long distances

... female zebra finches to discriminate between two males while hearing variously degraded distance calls and, second, to test whether females could improve their discrimination through ... See full document

9

Mitochondrial uncoupling as a regulator of life history trajectories in birds: an experimental study in the zebra finch

Mitochondrial uncoupling as a regulator of life history trajectories in birds: an experimental study in the zebra finch

... zebra finches have intrinsically ‘mild’ uncoupled mitochondria [i.e. in accordance with their high metabolic rate/body temperature compared with other taxa (Holmes et al., 2001)], an artificial uncoupling ... See full document

11

Sex specific effects of prenatal testosterone on nestling plasma antioxidant capacity in the zebra finch

Sex specific effects of prenatal testosterone on nestling plasma antioxidant capacity in the zebra finch

... female zebra finches have been shown to transfer higher amounts of androgens to their eggs when paired with a more attractive male (Gil et ...female zebra finches may fine tune development of individual ... See full document

6

Phylogenetic analysis of the human thyroglobulin regions

Phylogenetic analysis of the human thyroglobulin regions

... We investigated the origin of the Tg1 region domains, by studying the phylogeny of the Tg1 domains in an ana- lysis including the sea urchin protein (Echinodermata), the amphioxus protein (Cephalochordata), and the zeb- ... See full document

12

A first-generation microsatellite linkage map of the ruff

A first-generation microsatellite linkage map of the ruff

... In total, 102 microsatellite markers were tested, of which 52 were found to be polymorphic and were developed and characterized (Farrell et al. 2012). Forty-seven of these were selected for linkage mapping and used ... See full document

11

Replicating research in ecology and evolution: feasibility, incentives, and the cost-benefit conundrum

Replicating research in ecology and evolution: feasibility, incentives, and the cost-benefit conundrum

... the zebra finch colour ring work should be considered partial (but close) replications, despite the authors’ effort to repli- cate the original work precisely, because the breeding history of animals and ... See full document

6

Genetic mapping of the female mimic morph locus in the ruff

Genetic mapping of the female mimic morph locus in the ruff

... and zebra finch genome assemblies to search for possible candidate genes in the genomic location close to any microsatellites that were linked to the ruff Faeder ... See full document

5

Zebra finch males compensate in plumage ornaments at sexual maturation for a bad start in life

Zebra finch males compensate in plumage ornaments at sexual maturation for a bad start in life

... poor expression of traits, they need to decide when to do ...poor expression of these ...the expression of sexual ornaments, providing that costs of low expression in other traits, such as ... See full document

7

A comment on "A fast L p spike alignment metric" by A  J  Dubbs, B  A  Seiler and M  O  Magnasco [arXiv:0907 3137]

A comment on "A fast L p spike alignment metric" by A J Dubbs, B A Seiler and M O Magnasco [arXiv:0907 3137]

... metric by calculating ˜ h for the zebra finch data previous used to evaluate other spike train metrics [Houghton 2009, Houghton and Victor 2009]. The data set contains 24 sets of spike trains, corresponding ... See full document

9

Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor

Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor

... HSBs have been defined in all animal species thus far ex- amined for conserved chromosomal synteny [32]. Larkin et al. [22] argue that the continued presence of HSBs in all species may indicate a selective advantage to ... See full document

18

Pivotal Advance: Avian colony stimulating factor 1 (CSF 1), interleukin 34 (IL 34), and CSF 1 receptor genes and gene products

Pivotal Advance: Avian colony stimulating factor 1 (CSF 1), interleukin 34 (IL 34), and CSF 1 receptor genes and gene products

... the zebra finch (left) and the chicken (right) CSF1R are ...predicted zebra finch CSF-1 structure was produced using the same settings, and the superimposition angle is based on the co- ... See full document

12

The energetic cost of variations in wing span and wing asymmetry in the
zebra finch Taeniopygia guttata

The energetic cost of variations in wing span and wing asymmetry in the zebra finch Taeniopygia guttata

... of zebra finches Taeniopygia guttata, prior to and after experimental manipulation to generate asymmetry and a change in wing span by trimming the primary ... See full document

8

Contractile activity of the pectoralis in the zebra finch according to mode and velocity of flap bounding flight

Contractile activity of the pectoralis in the zebra finch according to mode and velocity of flap bounding flight

... Peak strains of 23.7% in the pectoralis (Fig.·3) are considerably less than the 32–35% strains reported for pigeons (Biewener et al., 1998), black-billed magpies (Warrick et al., 2001), mallards (1·kg; Anas ... See full document

7

Kinematics of flap bounding flight in the zebra finch over a wide range of speeds

Kinematics of flap bounding flight in the zebra finch over a wide range of speeds

... this prediction does not specifically address why a species with a relatively rounded wing or a wing of low aspect ratio should be constrained to use a feathered upstroke instead of a wingtip- reversal upstroke in ... See full document

15

Choreography of song, dance and beak movements in the zebra finch (Taeniopygia guttata)

Choreography of song, dance and beak movements in the zebra finch (Taeniopygia guttata)

... The hops and changes in body orientation and head position that make up the most prominent movements of the zebra finch courtship dance were not given in as stereotyped a fashion as the changes in beak ... See full document

10

Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

... Larkin DM, Daetwyler HD, Hernandez AG, Wright CL, Hetrick LA, Boucek L, Bachman SL, Band MR, Akraiko TV, Cohen-Zinder M et al. 2012. Whole-genome resequencing of two elite sires for the detection of haplotypes ... See full document

38

Nestling diet, secondary sexual traits and fitness in the zebra finch

Nestling diet, secondary sexual traits and fitness in the zebra finch

... presenting each male with a di¡erent female on ¢ve consecutive days behind a wire mesh screen and recording the mean amount of time spent singing in the ¢rst 5 min. Both secondary sexual traits show high measurement ... See full document

7

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