• No results found

The
first
part
of
this
thesis
(I)
concentrated
on
the
regulation
of
the
Uukuniemi
 virus
 (UUKV)
 genome
 expression;
 the
 non‐coding
 regions
 (NCRs)
 of
 UUKV
 RNA
 segments
 were
 analyzed
 in
 order
 to
 understand
 how
 transcription
 and
 replication
 machineries
of
the
virus
function.
A
comparison
of
three
RNA
segments
of
UUKV
using
 the
 minigenome
 system
 showed
 that
 NCRs
 carry
 all
 the
 necessary
 signals
 for
 the
 transcription,
 replication
 and
 packaging
 of
 the
 virus.
 The
 intergenic
 region
 (IGR),
 located
 between
the
N
and
NSs
protein
ORFs,
was
also
analyzed
in
the
minigenome
 system
 and
 it
 was
 demonstrated
 that
 this
 region
 is
 essential
 for
 transcription
 termination.



When
this
study
was
carried
out,
the
minigenome
system
was
the
only
reverse
 genetics
tool
to
study
the
transcription
and
replication
of
UUKV.
However,
since
then
 the
techniques
have
developed,
and
the
VLP‐system
was
subsequently
developed
for
 UUKV,
enabling
a
more
sophisticated
approach
to
study
the
molecular
characteristics
 of
 UUKV
 and
 other
 bunyaviruses.
 Many
 questions
 about
 bunyavirus
 transcription,
 replication,
and
encapsidation
of
the
RNAs
and
co‐packaging
the
RNPs
to
the
virions
 remain
still
open.
Moreover,
the
role(s)
of
the
signaling
sequences
and
NCRs
in
these
 processes
 requires
 further
 exploration.
 The
 discovery
 of
 new,
 pathogenic
 phleboviruses
makes
the
development
of
reverse
genetics
systems
for
phleboviruses
 even
 more
 topical.
 The
 rescue
 of
 infectious
 UUKV
 would
 be
 an
 interesting
 step
 in
 developing
 UUKV
 reverse
 genetics
 systems,
 and
 all
 the
 tools
 for
 this
 are
 already
 at
 hand.
The
unique
ambisense
coding
strategy
for
the
UUKV
S
segment
provides
also
an
 possibility
 to
 develope
 e.g.
 live‐attenuated
 vaccines;
 it
 was
 shown
 for
 RVFV,
 a
 pathogenic
 phlebovirus
 related
 to
 UUKV,
 that
 the
 NSs
 gene
 can
 be
 replaced
 and
 a
 recombinant
 virus
 containing
 only
 two
 genomic
 segments
 was
 generated.
 A
 similar
 technique
 could
 be
 adopted
 for
 UUKV,
 which
 as
 a
 non‐pathogenic
 member
 of
 the


Phlebovirus
genus
could
serve
as
an
safe
alternative
to
the
pathogenic
RVFV.



The
 second
 part
 of
 the
 study
 focused
 on
 the
 UUKV
 N
 protein
 (II,
 III),
 particularly
on
its
oligomerization
(i.e.
N‐N
interactions)
and
RNA‐binding
(i.e.
N‐RNA
 interactions).
The
mutational
analyses
of
the
N
protein
showed
that
both
the
N‐
and
C‐ termini
of
the
UUKV
N
protein
are
needed
for
oligomerization,
and
especially
the
two
 α‐helices
 in
 the
 N‐terminus
 are
 important
 for
 the
 N‐N
 interactions
 (II).
 The
 amino
 acids,
 which
 were
 likely
 to
 be
 involved
 in
 RNA‐binding
 were
 analyzed
 for
 their
 functional
 competence.
 Some
 of
 the
 mutations
 affected
 the
 N
 protein
 functionality
 severely.
 The
 predicted
 model
 for
 the
 UUKV
 N
 protein
 supported
 these
 findings:


hydrophobic
 residues
 in
 the
 N‐terminal
 part
 of
 the
 protein
 were
 important
 for
 oligomerization,
and
the
positively
charged
residues
in
the
proposed
central
cavity
of
 the
protein
may
be
involved
in
the
RNA‐binding.
Although
the
N
protein
structure
for
 the
RVFV
was
already
solved,
the
N
protein
structure
of
UUKV
N
protein
would
clarify
 many
 open
 questions
 in
 oligomerization
 and
 RNA‐binding
 of
 UUKV
 and
 other
 phleboviruses.
 The
 solved
 N
 protein
 structure
 would
 be
 of
 help
 to
 design
 potential
 antivirals
for
pathogenic
phleboviruses.



 


ACKNOWLEDGEMENTS

The
 work
 for
 this
 thesis
 was
 carried
 out
 at
 the
 Ludwig
 Institute
 for
 Cancer
 Research,
 Stockholm
 Branch,
 Karolinska
 Institutet,
 and
 Smittskyddsinstitutet,
 Stockholm,
 Sweden
 (publication
 I),
 and
 Department
 of
 Virology,
 Haartman
 Institute,
 University
of
Helsinki,
Finland
(publications
II
and
III).


I
 warmly
 thank
 my
 thesis
 supervisors,
 Docent
 Alexander
 Plyusnin
 and
 Professor
 emeritus
 Antti
 Vaheri
 for
 guiding
 me
 in
 this
 study.
 Alexander
 Plyusnin
 is
 thanked
 for
 having
 the
 focus
 on
 finalizing
 the
 projects
 and
 patience
 in
 this
 long
 process,
 and
 Antti
 Vaheri
 is
 thanked
 for
 inspiring
 discussions
 and
 enthusiastic
 attitude
towards
science.
Thank
you
both
for
this
opportunity.

 The
late
Professor
Ralf
Pettersson
is
thanked
for
guiding
me
to
the
world
of
the
 Uukuniemi
virus,
and
for
the
kind
supervision
in
the
first
publication.
The
Head
of
the
 Department,
Professor
Kalle
Saksela
is
thanked
for
providing
the
facilities
to
carry
out
 this
work.
Thesis
committee
members,
Docent
Maarit
Suomalainen
and
Docent
Maria
 Söderlund‐Venermo
are
thanked
for
their
guidance.
 I
owe
sincere
gratitude
to
the
reviewers
of
this
thesis,
Professor
Sarah
Butcher
 and
Docent
Petri
Susi.
You
really
helped
me
to
improve
this
work,
and
I
thank
you
for
 the
support
and
good
discussions
during
this
process.


Collaborators
 and
 co‐authors
 are
 thanked
 for
 their
 contributions:
 Dr.
 Ramon
 Flick
 is
 thanked
 also
 for
 co‐supervising
 me
 in
 the
 first
 publication
 and
 Alexander
 Freiberg
for
great
help:
it
was
a
pleasure
to
work
with
you
both.
Professor
Liisa
Holm
 and
 Vera
 Backström
 are
 thanked
 for
 their
 expertise
 in
 the
 bioinformatics,
 Vera
 also
 for
the
good
company
in
the
office
back
in
the
old
days.



Maurice
Forget
is
thanked
for
the
language
revision
of
this
thesis.


There
are
many
people
in
the
Department
who
helped
me
with
this
study,
and
 I
 am
 especially
 thankful
 for
 all
 the
 people
 in
 the
 zoonosis
 lab
 during
 these
 years
 of
 research.
Kirsi
Aaltonen,
Leena
Kostamovaara,
Tytti
Manni,
Pirjo
Sarjakivi,
and
Irina
 Suomalainen
have
always
been
there
ready
to
help
in
the
lab.
I
have
learned
a
lot
from
 you.

 All
the
"iloiset
virologit":
it
has
been
a
great
joy
to
work
with
all
of
you.
There
 has
always
been
an
expert
on
hand
whom
I
could
ask,
whatever
the
matter
concerns,
 in
between
the
heaven
and
the
earth.
And
Hadanka
and
the
lab.
Thank
you
all!
 I
want
to
mention
some
fellow
PhD
students
escpecially
–
most
of
you
already
 PhDs
 for
 a
 longer
 time
 –
 Agne
 Alminaite,
 Eili
 Huhtamo,
 Anu
 Jääskeläinen,
 Paula
 Kinnunen,
 Suvi
 Kuivanen,
 Satu
 Kurkela,
 Niina
 Putkuri,
 Maria
 Razzauti
 Sanfeliu,
 Satu
 Saraheimo,
Tarja
Sironen,
and
Liina
Voutilainen,
few
of
you
to
mention.
You
have
been
 great
company
and
support
during
these
years.


The
“Microbes”,
Anu
Jääskeläinen,
Samuel
Myllykangas,
Tiina
Partanen,
Hanna
 Sinkko,
and
Ville
Veckman
are
thanked
for
the
friendship
for
all
these
years.
Somehow
 the
majority
of
this
microbial
colony
has
moved
from
the
fields
of
Viikki
to
Meilahti,
it
 has
been
good
to
have
you
around
here.

 My
heartwelt
thanks
goes
to
my
dear
old
friends,
who
have
always
been
there:
 Lumi,
Maarit,
Lulu,
Jonna,
Meri,
Paula,
Nora,
Aaro,
Esko,
Janne,
Tuomas...
and
all
the
 other
good
old
“Töölö
people”
and
their
families:
thank
you
for
your
friendship
and
 support.
Seeing
you
feels
like
coming
home,
always.


I
 am
 extremely
 lucky
 to
 have
 a
 magnificent
 family
 around
 me.
 My
 parents,
 Harry
and
Marja;
your
love
and
support
and
interest
towards
my
work
has
been
very
 important
to
me.
I'm
deeply
grateful
to
you
for
everything.
My
dear
siblings
Otto
and
 Eeva
 and
 their
 families
 are
 also
 thanked,
 just
 for
 being
 there.
 My
 parents‐in‐law,
 Marja‐Liisa
and
Veikko,
thank
you
for
the
support
and
taking
care
of
the
children,
and
 all
the
relaxing
times
in
Porvoo
with
you
and
Tuomo's
family.



And
then
last
but
not
the
least:
our
lively,
lovely
children,
Saara
and
Eero,
and
 my
 love,
 Velkka.
 I
 am
 so
 fortunate
 to
 have
 you
 in
 my
 life.
 Velkka
 is
 thanked
 for
 the
 endless
love,
support,
patience,
and
understanding,
everything.
The
book
is
done
and
 mom
is
back.
 
 This
study
was
financially
supported
by
the
Helsinki
Biomedical
Graduate
Program,
the
 Finnish
Cultural
Foundation,
and
the
Sigrid
Jusélius
Foundation.
 
 
 Helsinki,
May
2012
 
 Anna
Katz
 
 
 
 


REFERENCES

Abrescia
N.
G.,
Bamford
D.
H.,
Grimes
J.
M.,
Stuart
D.
I.
(2012).
Structure
unifies
the
viral


universe.
Annu
Rev
Biochem
.


Accardi
 L.,
 Prehaud
 C.,
 Di
 Bonito
 P.,
 Mochi
 S.,
 Bouloy
 M.,
 Giorgi
 C.
 (2001).
 Activity
 of


Toscana
and
Rift
Valley
fever
virus
transcription
complexes
on
heterologous
templates.
J
 Gen
Virol
82,
781‐785.


Albertini
 A.
 A.,
 Wernimont
 A.
 K.,
 Muziol
 T.,
 Ravelli
 R.
 B.,
 Clapier
 C.
 R.,
 Schoehn
 G.,
 Weissenhorn
 W.,
 Ruigrok
 R.
 W.
 (2006).
 Crystal
 structure
 of
 the
 rabies
 virus


nucleoprotein‐RNA
complex.
Science
313,
360‐363.


Alminaite
 A.,
 Backström
 V.,
 Vaheri
 A.,
 Plyusnin
 A.
 (2008).
 Oligomerization
 of
 hantaviral


nucleocapsid
protein:
Charged
residues
in
the
N‐terminal
coiled‐coil
domain
contribute
 to
intermolecular
interactions.
J
Gen
Virol
89,
2167‐2174.


Alminaite
 A.,
 Halttunen
 V.,
 Kumar
 V.,
 Vaheri
 A.,
 Holm
 L.,
 Plyusnin
 A.
 (2006).


Oligomerization
 of
 hantavirus
 nucleocapsid
 protein:
 Analysis
 of
 the
 N‐terminal
 coiled‐ coil
domain.
J
Virol
80,
9073‐9081.


Andersson
A.
M.
&
Pettersson
R.
F.
(1998).
Targeting
of
a
short
peptide
derived
from
the


cytoplasmic
tail
of
the
G1
membrane
glycoprotein
of
Uukuniemi
virus
(Bunyaviridae)
to
 the
Golgi
complex.
J
Virol
72,
9585‐9596.


Andersson
 A.
 M.,
 Melin
 L.,
 Persson
 R.,
 Raschperger
 E.,
 Wikström
 L.,
 Pettersson
 R.
 F.
 (1997).
 Processing
 and
 membrane
 topology
 of
 the
 spike
 proteins
 G1
 and
 G2
 of


Uukuniemi
virus.
J
Virol
71,
218‐225.


Arnold
K.,
Bordoli
L.,
Kopp
J.,
Schwede
T.
(2006).
The
SWISS‐MODEL
workspace:
A
web‐

based
 environment
 for
 protein
 structure
 homology
 modelling.
 Bioinformatics
 22,
 195‐ 201.


Azzeh
 M.,
 Flick
 R.,
 Hobom
 G.
 (2001).
 Functional
 analysis
 of
 the
 influenza
 A
 virus
 cRNA


promoter
 and
 construction
 of
 an
 ambisense
 transcription
 system.
 Virology
 289,
 400‐ 410.
 Ball
L.
A.
(2007).
Virus
replication
strategies.
In
Fields
Virology,
5th
edn,
pp.
119‐139.
Edited
 by
D.
M.
Knipe,
P.
M.
Howley,
D.
E.
Griffin,
R.
A.
Lamb,
M.
A.
Martin,
B.
Roizman
&
S.
E
 Straus.
Philadelphia,
PA:
Lippincott
Williams
&
Wilkins,
a
Wolters
Kluwer
Business.
 Baltimore
D.
(1971).
Expression
of
animal
virus
genomes.
Bacteriol
Rev
35,
235‐241.
 Barr
J.
N.,
Elliott
R.
M.,
Dunn
E.
F.,
Wertz
G.
W.
(2003).
Segment‐specific
terminal
sequences
 of
Bunyamwera
bunyavirus
regulate
genome
replication.
Virology
311,
326‐338.


Barr
 J.
 N.
 &
 Wertz
 G.
 W.
 (2004).
 Bunyamwera
 bunyavirus
 RNA
 synthesis
 requires


cooperation
of
3'‐
and
5'‐terminal
sequences.
J
Virol
78,
1129‐1138.


Barr
J.
N.,
Rodgers
J.
W.,
Wertz
G.
W.
(2006).
Identification
of
the
Bunyamwera
bunyavirus


transcription
termination
signal.
J
Gen
Virol
87,
189‐198.


Becker
S.,
Rinne
C.,
Hofsäss
U.,
Klenk
H.
D.,
Mühlberger
E.
(1998).
Interactions
of
Marburg


Bergeron
 E.,
 Albariño
 C.
 G.,
 Khristova
 M.
 L.,
 Nichol
 S.
 T.
 (2010).
 Crimean‐Congo


hemorrhagic
 fever
 virus‐encoded
 ovarian
 tumor
 protease
 activity
 is
 dispensable
 for
 virus
RNA
polymerase
function.
J
Virol
84,
216‐226.


Bharat
 T.
 A.,
 Riches
 J.
 D.,
 Kolesnikova
 L.,
 Welsch
 S.,
 Krahling
 V.,
 Davey
 N.,
 Parsy
 M.
 L.,
 Becker
S.,
Briggs
J.
A.
(2011).
Cryo‐electron
tomography
of
Marburg
virus
particles
and


their
morphogenesis
within
infected
cells.
PLoS
Biol
9,
e1001196.


Bilk
S.,
Schulze
C.,
Fischer
M.,
Beer
M.,
Hlinak
A.,
Hoffmann
B.
(2012).
Organ
distribution


of
 Schmallenberg
 virus
 RNA
 in
 malformed
 newborns.
 Vet
 Microbiol,
 
 In
 press
 (http://dx.doi.org/10.1016/j.vetmic.2012.03.035).


Billecocq
 A.,
 Spiegel
 M.,
 Vialat
 P.,
 Kohl
 A.,
 Weber
 F.,
 Bouloy
 M.,
 Haller
 O.
 (2004).
 NSs


protein
 of
 Rift
 Valley
 fever
 virus
 blocks
 interferon
 production
 by
 inhibiting
 host
 gene
 transcription.
J
Virol
78,
9798‐9806.


Bird
 B.
 H.,
 Maartens
 L.
 H.,
 Campbell
 S.,
 Erasmus
 B.
 J.,
 Erickson
 B.
 R.,
 Dodd
 K.
 A.,
 Spiropoulou
 C.
 F.,
 Cannon
 D.,
 Drew
 C.
 P.,
 Knust
 B.,
 McElroy
 A.
 K.,
 Khristova
 M.
 L.,
 Albariño
C.
G.,
Nichol
S.
T.
(2011).
Rift
Valley
fever
virus
vaccine
lacking
the
NSs
and


NSm
 genes
 is
 safe,
 nonteratogenic,
 and
 confers
 protection
 from
 viremia,
 pyrexia,
 and
 abortion
following
challenge
in
adult
and
pregnant
sheep.
J
Virol
85,
12901‐12909.


Bishop
 D.
 H.,
 Calisher
 C.
 H.,
 Casals
 J.,
 Chumakov
 M.
 P.,
 Gaidamovich
 S.
 Y.,
 Hannoun
 C.,
 Lvov
D.
K.,
Marshall
I.
D.,
Oker­Blom
N.,
Pettersson
R.
F.,
Porterfield
J.
S.,
Russel
P.
 K.,
Shope
R.
E,
Westaway
E.
G.
(1980).
Bunyaviridae.
Intervirology
14,
125‐143.


Blakqori
 G.
 &
 Weber
 F.
 (2005).
 Efficient
 cDNA‐based
 rescue
 of
 La
 Crosse
 bunyaviruses


expressing
or
lacking
the
nonstructural
protein
NSs.
J
Virol
79,
10420‐10428.


Blakqori
 G.,
 Kochs
 G.,
 Haller
 O.,
 Weber
 F.
 (2003).
 Functional
 L
 polymerase
 of
 La
 Crosse


virus
allows
in
vivo
reconstitution
of
recombinant
nucleocapsids.
J
Gen
Virol
84,
1207‐ 1214.
 Bonneau
R.,
Strauss
C.
E.,
Rohl
C.
A.,
Chivian
D.,
Bradley
P.,
Malmstrom
L.,
Robertson
T.,
 Baker
D.
(2002).
De
novo
prediction
of
three‐dimensional
structures
for
major
protein
 families.
J
Mol
Biol
322,
65‐78.
 Boshra
H.,
Lorenzo
G.,
Busquets
N.,
Brun
A.
(2011).
Rift
Valley
fever:
Recent
insights
into
 pathogenesis
and
prevention.
J
Virol
85,
6098‐6105.


Bouloy
 M.
 (2011).
 Molecular
 biology
 of
 phleboviruses.
 In
 Bunyaviridae:
 Molecular
 and


Cellular
 Biology,
 pp.
 95‐128.
 Edited
 by
 A.
 Plyusnin
 &
 R.
 M.
 Elliott.
 Norfolk,
 UK:
 Caister
 Academic
Press.
 Bouloy
M.
&
Flick
R.
(2009).
Reverse
genetics
technology
for
Rift
Valley
fever
virus:
Current
 and
future
applications
for
the
development
of
therapeutics
and
vaccines.
Antiviral
Res
 84,
101‐118.
 Bouloy
M.,
Janzen
C.,
Vialat
P.,
Khun
H.,
Pavlovic
J.,
Huerre
M.,
Haller
O.
(2001).
Genetic
 evidence
for
an
interferon‐antagonistic
function
of
Rift
Valley
fever
virus
nonstructural
 protein
NSs.
J
Virol
75,
1371‐1377.
 Brennan
B.,
Li
P.,
Elliott
R.
M.
(2011a).
 Generation
and
characterization
of
a
recombinant
 Rift
Valley
fever
virus
expressing
a
V5
epitope‐tagged
RNA‐dependent
RNA
polymerase.
 J
Gen
Virol
92,
2906‐2913.


Brennan
 B.,
 Welch
 S.
 R.,
 McLees
 A.,
 Elliott
 R.
 M.
 (2011b).
 Creation
 of
 a
 recombinant
 Rift


Bridgen
A.
&
Elliott
R.
M.
(1996).
Rescue
of
a
segmented
negative‐strand
RNA
virus
entirely


from
cloned
complementary
DNAs.
Proc
Natl
Acad
Sci
U
S
A
93,
15400‐15404.


Buchan
D.
W.,
Ward
S.
M.,
Lobley
A.
E.,
Nugent
T.
C.,
Bryson
K.,
Jones
D.
T.
(2010).
Protein


annotation
 and
 modelling
 servers
 at
 University
 College
 London.
 Nucleic
 Acids
 Res
 38,
 W563‐8.


Calisher
 C.
 H.
 (1991).
 Bunyaviridae.
 In
 Classification
 and
 Nomenclature
 of
 Viruses
 ­
 Fifth


Report
 of
 the
 International
 Committee
 on
 Taxonomy
 of
 Viruses.
 Archives
 of
 Virology
 Supplementum
 2.
 Edited
 by
 R.
 I.
 B.
 Francki,
 C.
 M.
 Fauquet,
 D.
 L.
 Knudson
 &
 F.
 Brown.
 Wien,
Austria:
Springer‐Verlag.


Cann
A.
J.
(2001).
Principles
of
Molecular
Virology,
3rd
edn.
London,
UK:
Academic
Press.
 Carstens
E.
B.
(2011).
Introduction
to
virus
taxonomy.
In
Virus
Taxonomy:
Ninth
Report
of
the


International
 Committee
 on
 Taxonomy
 of
 Viruses,
 pp.
 4‐7.
 Edited
 by
 A.
 M.
 Q.
 King,
 E.
 Lefkowitz,
M.
J.
Adams
&
E.
B.
Carstens.
San
Diego,
CA:
Academic
Press,
Elsevier
Inc.


Charrel
 R.
 N.,
 Gallian
 P.,
 Navarro­Mari
 J.
 M.,
 Nicoletti
 L.,
 Papa
 A.,
 Sanchez­Seco
 M.
 P.,
 Tenorio
A.,
de
Lamballerie
X.
(2005).
Emergence
of
Toscana
virus
in
Europe.
Emerg


Infect
Dis
11,
1657‐1663.


Cole
C.,
Barber
J.
D.,
Barton
G.
J.
(2008).
The
Jpred
3
secondary
structure
prediction
server.


Nucleic
Acids
Res
36,
W197‐201.


Depaquit
J.,
Grandadam
M.,
Fouque
F.,
Andry
P.
E.,
Peyrefitte
C.
(2010).
Arthropod‐borne


viruses
 transmitted
 by
 phlebotomine
 sandflies
 in
 Europe:
 A
 review.
 Euro
 Surveill
 15,
 19507.


Dunn
 E.
 F.,
 Pritlove
 D.
 C.,
 Jin
 H.,
 Elliott
 R.
 M.
 (1995).
 Transcription
 of
 a
 recombinant


bunyavirus
 RNA
 template
 by
 transiently
 expressed
 bunyavirus
 proteins.
 Virology
 211,
 133‐143.


ECDC
 (2011).
 European
 Centre
 for
 Disease
 Prevention
 and
 Control:
 risk
 assessment:
 New


Orthobunyavirus
 isolated
 from
 infected
 cattle
 and
 small
 livestock
 –
 potential
 implications
 for
 human
 health.
 (ecdc.europa.eu/en/press/news/Lists/News/ECDC_
 DispForm.aspx?List=32e43ee8‐e230‐4424‐a783‐85742124029a&ID=628&RootFolder=
 %2Fen%2Fpress%2Fnews%2Flists%2Fnews).
Accessed
26/04/2012.
 Eifan
S.
A.
&
Elliott
R.
M.
(2009).
Mutational
analysis
of
the
Bunyamwera
orthobunyavirus
 nucleocapsid
protein
gene.
J
Virol
83,
11307‐11317.
 Elliott
R.
M.
&
Blakqori
G.
(2011).
Molecular
biology
of
orthobunyaviruses.
In
Bunyaviridae:
 Molecular
and
Cellular
Biologypp.
1‐39.
Edited
by
A.
Plyusnin
&
R.
M.
Elliott.
Norfolk,
UK.:
 Caister
Academic
Press.
 Elliott
R.
M.
(1990).
Molecular
biology
of
the
Bunyaviridae.
J
Gen
Virol
71,
501‐522.
 Elliott
R.
M.,
Dunn
E.,
Simons
J.
F.,
Pettersson
R.
F.
(1992).
Nucleotide
sequence
and
coding
 strategy
of
the
Uukuniemi
virus
L
RNA
segment.
J
Gen
Virol
73,
1745‐1752.
 Enami
M.,
Luytjes
W.,
Krystal
M.,
Palese
P.
(1990).
Introduction
of
site‐specific
mutations
 into
the
genome
of
influenza
virus.
Proc
Natl
Acad
Sci
U
S
A
87,
3802‐3805.


Fauquet
 C.
 M.,
 Mayo
 M.
 A.,
 Maniloff
 J.,
 Desselberger
 U.,
 Ball
 L.
 A.
 (ed)
 (2005).
 Virus


Taxonomy:
 Eighth
 report
 of
 the
 international
 committee
 on
 taxonomy
 of
 viruses.
 San
 Diego,
CA:
Academic
Press,
Elsevier
Inc.



 


Ferron
F.,
Li
Z.,
Danek
E.
I.,
Luo
D.,
Wong
Y.,
Coutard
B.,
Lantez
V.,
Charrel
R.,
Canard
B.,
 Walz
 T.,
 Lescar
 J.
 (2011).
 The
 hexamer
 structure
 of
 Rift
 Valley
 fever
 virus


nucleoprotein
suggests
a
mechanism
for
its
assembly
into
ribonucleoprotein
complexes.
 PLoS
Pathog
7,
e1002030.


Flick
 R.
 &
 Pettersson
 R.
 F.
 (2001).
 Reverse
 genetics
 system
 for
 Uukuniemi
 virus


(Bunyaviridae):
 RNA
 polymerase
 I‐catalyzed
 expression
 of
 chimeric
 viral
 RNAs.
 J
 Virol


75,
1643‐1655.


Flick
 R.,
 Elgh
 F.,
 Pettersson
 R.
 F.
 (2002).
 Mutational
 analysis
 of
 the
 Uukuniemi
 virus


(Bunyaviridae
 family)
 promoter
 reveals
 two
 elements
 of
 functional
 importance.
 J
 Virol


76,
10849‐10860.


Flick
K.,
Hooper
J.
W.,
Schmaljohn
C.
S.,
Pettersson
R.
F.,
Feldmann
H.,
Flick
R.
(2003a).


Rescue
of
Hantaan
virus
minigenomes.
Virology
306,
219‐224.


Flick
 R.,
 Flick
 K.,
 Feldmann
 H.,
 Elgh
 F.
 (2003b).
 Reverse
 genetics
 for
 Crimean‐Congo


hemorrhagic
fever
virus.
J
Virol
77,
5997‐6006.


Freiberg
A.
N.,
Sherman
M.
B.,
Morais
M.
C.,
Holbrook
M.
R.,
Watowich
S.
J.
(2008).
Three‐

dimensional
 organization
 of
 Rift
 Valley
 fever
 virus
 revealed
 by
 cryoelectron
 tomography.
J
Virol
82,
10341‐10348.


Frias­Staheli
 N.,
 Medina
 R.
 A.,
 Bridgen
 A.
 (2011).
 Nairovirus
 molecular
 biology
 and


interaction
with
host
cells.
In
Bunyaviridae:
Molecular
and
Cellular
Biology,
pp.
129‐162.
 Edited
by
A.
Plyusnin
&
R.
M.
Elliott.
Norfolk,
UK:
Caister
Academic
Press.


Friedrich
 Loeffler
 Institute.
 (2012).
 New
 orthobunyavirus
 detected
 in
 cattle
 in
 Germany.


(http://www.fli.bund.de/fileadmin/dam_uploads/press/Schmallenberg‐ Virus_20120104.pdf).
Accessed
26/04/2012.


Gahmberg
 N.,
 Kuismanen
 E.,
 Keränen
 S.,
 Pettersson
 R.
 F.
 (1986).
 Uukuniemi
 virus


glycoproteins
 accumulate
 in
 and
 cause
 morphological
 changes
 of
 the
 Golgi
 complex
 in
 the
absence
of
virus
maturation.
J
Virol
57,
899‐906.


Garcin
 D.,
 Lezzi
 M.,
 Dobbs
 M.,
 Elliott
 R.
 M.,
 Schmaljohn
 C.,
 Kang
 C.
 Y.,
 Kolakofsky
 D.
 (1995).
The
5'
ends
of
Hantaan
virus
(Bunyaviridae)
RNAs
suggest
a
prime‐and‐realign
 mechanism
for
the
initiation
of
RNA
synthesis.
J
Virol
69,
5754‐5762.
 Ge
P.,
Tsao
J.,
Schein
S.,
Green
T.
J.,
Luo
M.,
Zhou
Z.
H.
(2010).
Cryo‐EM
model
of
the
bullet‐ shaped
vesicular
stomatitis
virus.
Science
327,
689‐693.
 Gerrard
S.
R.,
Bird
B.
H.,
Albariño
C.
G.,
Nichol
S.
T.
(2007).
The
NSm
proteins
of
Rift
Valley
 fever
virus
are
dispensable
for
maturation,
replication
and
infection.
Virology
359,
459‐ 465.
 Gibbens
N.
(2012).
Schmallenberg
virus:
A
novel
viral
disease
in
Northern
Europe.
Vet
Rec
 170,
58.
 Green
T.
J.,
Zhang
X.,
Wertz
G.
W.,
Luo
M.
(2006).
Structure
of
the
vesicular
stomatitis
virus
 nucleoprotein‐RNA
complex.
Science
313,
357‐360.
 Guo
Y.,
Wang
W.,
Ji
W.,
Deng
M.,
Sun
Y.,
Zhou
H.,
Yang
C.,
Deng
F.,
Wang
H.,
Hu
Z.,
Lou
Z.,
 Rao
 Z.
 (2012).
 Crimean‐Congo
 hemorrhagic
 fever
 virus
 nucleoprotein
 reveals


endonuclease
activity
in
bunyaviruses.
Proc
Natl
Acad
Sci
U
S
A
109,
5046‐5051.


Habjan
 M.,
 Penski
 N.,
 Spiegel
 M.,
 Weber
 F.
 (2008).
 T7
 RNA
 polymerase‐dependent
 and
 ‐

independent
 systems
 for
 cDNA‐based
 rescue
 of
 Rift
 Valley
 fever
 virus.
 J
 Gen
 Virol
 89,
 2157‐2166.


Habjan
M.,
Pichlmair
A.,
Elliott
R.
M.,
Överby
A.
K.,
Glatter
T.,
Gstaiger
M.,
Superti­Furga
 G.,
Unger
H.,
Weber
F.
(2009).
NSs
protein
of
Rift
Valley
fever
virus
induces
the
specific


degradation
 of
 the
 double‐stranded
 RNA‐dependent
 protein
 kinase.
 J
 Virol
 83,
 4365‐ 4375.


Hasegawa
H.
&
Holm
L.
(2009).
Advances
and
pitfalls
of
protein
structural
alignment.
Curr


Opin
Struct
Biol
19,
341‐348.


Hastie
 K.
 M.,
 Kimberlin
 C.
 R.,
 Zandonatti
 M.
 A.,
 MacRae
 I.
 J.,
 Saphire
 E.
 O.
 (2011a).


Structure
of
the
Lassa
virus
nucleoprotein
reveals
a
dsRNA‐specific
3'
to
5'
exonuclease
 activity
essential
for
immune
suppression.
Proc
Natl
Acad
Sci
U
S
A
108,
2396‐2401.


Hastie
K.
M.,
Liu
T.,
Li
S.,
King
L.
B.,
Ngo
N.,
Zandonatti
M.
A.,
Woods
V.
L.,Jr,
de
la
Torre
J.
 C.,
 Saphire
 E.
 O.
 (2011b).
 Crystal
 structure
 of
 the
 Lassa
 virus
 nucleoprotein‐RNA


complex
 reveals
 a
 gating
 mechanism
 for
 RNA
 binding.
 Proc
 Natl
 Acad
 Sci
 U
 S
 A
 108,
 19365‐19370.


Hewlett
 M.
 J.,
 Pettersson
 R.
 F.,
 Baltimore
 D.
 (1977).
 Circular
 forms
 of
 Uukuniemi
 virion


RNA:
An
electron
microscopic
study.
J
Virol
21,
1085‐1093.


Hoenen
 T.,
 Groseth
 A.,
 de
 Kok­Mercado
 F.,
 Kuhn
 J.
 H.,
 Wahl­Jensen
 V.
 (2011).


Minigenomes,
transcription
and
replication
competent
virus‐like
particles
and
beyond:
 Reverse
genetics
systems
for
filoviruses
and
other
negative
stranded
hemorrhagic
fever
 viruses.
Antiviral
Res
91,
195‐208.


Honig
 J.
 E.,
 Osborne
 J.
 C.,
 Nichol
 S.
 T.
 (2004).
 The
 high
 genetic
 variation
 of
 viruses
 of
 the


genus
Nairovirus
reflects
the
diversity
of
their
predominant
tick
hosts.
Virology
318,
10‐ 16.


Huiskonen
J.
T.,
Överby
A.
K.,
Weber
F.,
Grünewald
K.
(2009).
Electron
cryo‐microscopy


and
single‐particle
averaging
of
Rift
Valley
fever
virus:
Evidence
for
GN‐GC
glycoprotein
 heterodimers.
J
Virol
83,
3762‐3769.


Ikegami
 T.,
 Won
 S.,
 Peters
 C.
 J.,
 Makino
 S.
 (2005).
 Rift
 Valley
 fever
 virus
 NSs
 mRNA
 is


transcribed
from
an
incoming
anti‐viral‐sense
S
RNA
segment.
J
Virol
79,
12106‐12111.


Ikegami
T.,
Narayanan
K.,
Won
S.,
Kamitani
W.,
Peters
C.
J.,
Makino
S.
(2009).
Rift
Valley


fever
virus
NSs
protein
promotes
post‐transcriptional
downregulation
of
protein
kinase
 PKR
and
inhibits
eIF2alpha
phosphorylation.
PLoS
Pathog
5,
e1000287.


Iwasaki
 M.,
 Takeda
 M.,
 Shirogane
 Y.,
 Nakatsu
 Y.,
 Nakamura
 T.,
 Yanagi
 Y.
 (2009).
 The


matrix
 protein
 of
 measles
 virus
 regulates
 viral
 RNA
 synthesis
 and
 assembly
 by
 interacting
with
the
nucleocapsid
protein.
J
Virol
83,
10374‐10383.


Jin
H.
&
Elliott
R.
M.
(1993).
Characterization
of
Bunyamwera
virus
S
RNA
that
is
transcribed


and
 replicated
 by
 the
 L
 protein
 expressed
 from
 recombinant
 vaccinia
 virus.
 J
 Virol
 67,
 1396‐1404.


Kaukinen
P.,
Vaheri
A.,
Plyusnin
A.
(2003).
Mapping
of
the
regions
involved
in
homotypic


interactions
of
Tula
hantavirus
N
protein.
J
Virol
77,
10910‐10916.


Kaukinen
 P.,
 Kumar
 V.,
 Tulimäki
 K.,
 Engelhardt
 P.,
 Vaheri
 A.,
 Plyusnin
 A.
 (2004).


Oligomerization
 of
 hantavirus
 N
 protein:
 C‐terminal
 alpha‐helices
 interact
 to
 form
 a
 shared
hydrophobic
space.
J
Virol
78,
13669‐13677.


Kelley
L.
A.
&
Sternberg
M.
J.
(2009).
Protein
structure
prediction
on
the
web:
A
case
study


Kormelink
 R.
 (2011).
 Molecular
 biology
 of
 tospoviruses
 and
 resistance
 strategies.
 In
 Bunyaviridae:
Molecular
and
Cellular
Biology,
pp.
163‐191.
Edited
by
A.
Plyusnin
&
R.
M.
 Elliott.
Norfolk,
UK:
Caister
Academic
Press.
 Kuismanen
E.
(1984).
Posttranslational
processing
of
Uukuniemi
virus
glycoproteins
G1
and
 G2.
J
Virol
51,
806‐812.
 Kuismanen
E.,
Bang
B.,
Hurme
M.,
Pettersson
R.
F.
(1984).
 Uukuniemi
virus
maturation:


Immunofluorescence
 microscopy
 with
 monoclonal
 glycoprotein‐specific
 antibodies.
 J
 Virol
51,
137‐146.


Kuismanen
E.,
Hedman
K.,
Saraste
J.,
Pettersson
R.
F.
(1982).
Uukuniemi
virus
maturation:


Accumulation
of
virus
particles
and
viral
antigens
in
the
golgi
complex.
Mol
Cell
Biol
2,
 1444‐1458.


LaBeaud
 A.
 D.,
 Kazura
 J.
 W.,
 King
 C.
 H.
 (2010).
 Advances
 in
 Rift
 Valley
 fever
 research:


Insights
for
disease
prevention.
Curr
Opin
Infect
Dis
23,
403‐408.


Laemmli
 U.
 K.
 (1970).
 Cleavage
 of
 structural
 proteins
 during
 the
 assembly
 of
 the
 head
 of


bacteriophage
T4.
Nature
227,
680‐685.
 Le
May
N.,
Gauliard
N.,
Billecocq
A.,
Bouloy
M.
(2005).
The
N
terminus
of
Rift
Valley
fever
 virus
nucleoprotein
is
essential
for
dimerization.
J
Virol
79,
11974‐11980.
 Leonard
V.
H.,
Kohl
A.,
Osborne
J.
C.,
McLees
A.,
Elliott
R.
M.
(2005).
Homotypic
interaction
 of
Bunyamwera
virus
nucleocapsid
protein.
J
Virol
79,
13166‐13172.
 Levingston
Macleod
J.
M.,
D'Antuono
A.,
Loureiro
M.
E.,
Casabona
J.
C.,
Gomez
G.
A.,
Lopez
 N.
(2011).
Identification
of
two
functional
domains
within
the
arenavirus
nucleoprotein.
 J
Virol
85,
2012‐2023.


Li
 M.
 L.,
 Ramirez
 B.
 C.,
 Krug
 R.
 M.
 (1998).
 RNA‐dependent
 activation
 of
 primer
 RNA


production
by
influenza
virus
polymerase:
Different
regions
of
the
same
protein
subunit
 constitute
the
two
required
RNA‐binding
sites.
EMBO
J
17,
5844‐5852.


Liljeroos
L.,
Huiskonen
J.
T.,
Ora
A.,
Susi
P.,
Butcher
S.
J.
(2011).
Electron
cryotomography


of
 measles
 virus
 reveals
 how
 matrix
 protein
 coats
 the
 ribonucleocapsid
 within
 intact
 virions.
Proc
Natl
Acad
Sci
U
S
A
108,
18085‐18090.


Lopez
N.,
Muller
R.,
Prehaud
C.,
Bouloy
M.
(1995).
The
L
protein
of
Rift
Valley
fever
virus


can
 rescue
 viral
 ribonucleoproteins
 and
 transcribe
 synthetic
 genome‐like
 RNA
 molecules.
J
Virol
69,
3972‐3979.


Lozach
P.
Y.,
Kühbacher
A.,
Meier
R.,
Mancini
R.,
Bitto
D.,
Bouloy
M.,
Helenius
A.
(2011).


DC‐SIGN
as
a
receptor
for
phleboviruses.
Cell
Host
Microbe
10,
75‐88.


Lozach
P.
Y.,
Mancini
R.,
Bitto
D.,
Meier
R.,
Oestereich
L.,
Överby
A.
K.,
Pettersson
R.
F.,
 Helenius
 A.
 (2010).
 Entry
 of
 bunyaviruses
 into
 mammalian
 cells.
 Cell
 Host
 Microbe
 7,


488‐499.


Luytjes
W.,
Krystal
M.,
Enami
M.,
Parvin
J.
D.,
Palese
P.
(1989).
Amplification,
expression,


and
packaging
of
foreign
gene
by
influenza
virus.
Cell
59,
1107‐1113.


Mahmood
K.,
Bright
R.
A.,
Mytle
N.,
Carter
D.
M.,
Crevar
C.
J.,
Achenbach
J.
E.,
Heaton
P.
 M.,
Tumpey
T.
M.,
Ross
T.
M.
(2008).
H5N1
VLP
vaccine
induced
protection
in
ferrets


Related documents