• No results found

The aim of the work described in this thesis is to elucidate the mechanisms of toxic compound resistance employed by L. lactis and to examine the physiological responses when one of the key mechanisms, transporter-based efflux, is genetically inactivated. Chapter 1 provides an introduction to transporter and non-transporter based resistance mechanisms in Gram-positive bacteria with special reference to lactic acid bacteria. In addition, the

mechanism of surface adherence and biofilm development is discussed.

Chapter 2 describes how L. lactis cells devoid of the main MDR and cholate transporter LmrCD can regain resistance when exposed to increasing levels of cholate. The resultant cholate-adapted strain (∆lmrCDr) showed a number of alterations when compared to its parental strain, the drug-sensitive L. lactis NZ9000 ∆lmrCD. The ∆lmrCDr cells exhibit (i) improved resistance toward several bile acids but not to drugs, (ii) an altered susceptibility to antimicrobial peptides, and (iii) morphological changes including a tendency to autoaggregate and flocculate in liquid media. Transcriptome and transport analyses suggest that the acquired resistance is transport unrelated but instead arises from various stress responses, changes to the cell envelope and alterations in metabolism. In contrast, wild-type cells induce the expression of lmrCD upon exposure to cholate, whereupon the cholate is actively extruded from the cells. Together, these data suggest a central role for an efflux-based mechanism in bile acid resistance and implicate LmrCD as the main system responsible in planktonic L. lactis.

Chapter 3 examines how bile acids influence surface adhesion and biofilm development by the cholate resistant ∆lmrCDr strain. Importantly, the results show that bile acids stimulate biofilm formation and render these structures highly resistant to such compounds. This increased biofilm formation appears to be related to the production of extracellular polysaccharides. In addition, the physicochemical aspects of the altered cell surface were studied.

Chapter 4 examines the ability of L. lactis cells lacking the LmrCD transporter to regain resistance to the cationic dye rhodamine 6G and to develop multidrug resistance. Obtained resistant strains show a multidrug resistance phenotype, and express several uncharacterized efflux transporters.

However, the resistance phenotype is likely broader than transporter-based alone, as also metabolic and physiological changes are observed. The data indicate that L. lactis is equipped with cryptic resistance mechanisms that can be activated upon long-term exposure to toxic compounds and provide multiple lines of defense. Finally, Chapter 5 summarizes the results presented in the thesis and discusses the broader implications of the work.

REFERENCES

1. 2006. Food and Drug Administration. Guidance for Industry on Complementary and Alternative Medicine Products and Their Regulation, In Food and Drug Administration. U.S. Department of Health and Human Services.

2. Abee, T. and J. A. Wouters. 1999. Microbial stress response in minimal processing. Int. J. Food Microbiol. 50:65-91.

3. Adawi, D., S. Ahrne, and G. Molin. 2001. Effects of different probiotic strains of Lactobacillus and Bifidobacterium on bacterial translocation and liver injury in an acute liver injury model. Int. J. Food Microbiol. 70:213-220.

4. Al-Fattani, M. A. and L. J. Douglas. 2006. Biofilm matrix of Candida albicans and Candida tropicalis: chemical composition and role in drug resistance. J Med Microbiol. 55:999-1008.

5. Allison, D. G. and M. J. Matthews. 1992. Effect of polysaccharide interactions on antibiotic susceptibility of Pseudomonas aeruginosa. J Appl. Bacteriol.

73:484-488.

6. Anderl, J. N., M. J. Franklin, and P. S. Stewart. 2000. Role of antibiotic penetration limitation in Klebsiella pneumoniae biofilm resistance to ampicillin and ciprofloxacin. Antimicrob. Agents Chemother. 44:1818-1824.

7. Andreassi, J. L., M. W. Vetting, P. W. Bilder, S. L. Roderick, and T. S.

Leyh. 2009. Structure of the ternary complex of phosphomevalonate kinase: the enzyme and its family. Biochemistry 48:6461-6468.

8. Annous, B. A., M. F. Kozempel, and M. J. Kurantz. 1999. Changes in membrane fatty acid composition of Pediococcus sp. strain NRRL B-2354 in response to growth conditions and its effect on thermal resistance. Appl.

Environ. Microbiol. 65:2857-2862.

9. Anselme, K., P. Davidson, A. M. Popa, M. Giazzon, M. Liley, and L. Ploux.

The interaction of cells and bacteria with surfaces structured at the nanometre scale. Acta Biomaterialia In Press, Corrected Proof.

10. Bagge, N., M. Schuster, M. Hentzer, O. Ciofu, M. Givskov, E. P.

Greenberg, and N. Hoiby. 2004. Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production. Antimicrob. Agents Chemother. 48:1175-1187.

11. Balaban, N. Q., J. Merrin, R. Chait, L. Kowalik, and S. Leibler. 2004.

Bacterial persistence as a phenotypic switch. Science 305:1622-1625.

12. Balibar, C. J., X. Shen, and J. Tao. 2009. The mevalonate pathway of Staphylococcus aureus. J. Bacteriol. 191:851-861.

13. Barclay, M. L., E. J. Begg, S. T. Chambers, P. E. Thornley, P. K.

Pattemore, and K. Grimwood. 1996. Adaptive resistance to tobramycin in

Pseudomonas aeruginosa lung infection in cystic fibrosis. J. Antimicrob.

Chemother. 37:1155-1164.

14. Batta, A. K., G. Salen, R. Arora, S. Shefer, M. Batta, and A. Person. 1990.

Side chain conjugation prevents bacterial 7-dehydroxylation of bile acids. J.

Biol. Chem. 265:10925-10928.

15. Bayles, K. W. 2007. The biological role of death and lysis in biofilm development. Nat. Rev. Microbiol. 5:721-726.

16. Bayoudh, S., A. Othmane, F. Bettaieb, A. Bakhrouf, H. Ben Ouada, and L.

Ponsonnet. 2004. Quantification of the adhesion free energy between bacteria and hydrophobic and hydrophilic substrata., p. 300-305. In N. Jaffrezic-Renault, H. Maaref, R. Lamartine, H. Ben, and M. Gamoudi (ed.), Fourth Maghreb / EuropeMeeting on Material and Their Applications for Devices and Physical, Chemical and Biological Sensors (MADICA 2004). Elsevier Science, Tunis.

17. Begley, M., C. G. Gahan, and C. Hill. 2002. Bile stress response in Listeria monocytogenes LO28: adaptation, cross-protection, and identification of genetic loci involved in bile resistance. Appl. Environ. Microbiol. 68:6005-6012.

18. Begley, M., C. Hill, and C. G. Gahan. 2006. Bile salt hydrolase activity in probiotics. Appl. Environ. Microbiol. 72:1729-1738.

19. Behlau, I. and M. S. Gilmore. 2008. Microbial biofilms in ophthalmology and infectious disease. Arch. Ophthalmol. 126:1572-1581.

20. Berg, R. D. 1995. Bacterial translocation from the gastrointestinal tract. Trends Microbiol. 3:149-154.

Schaapherder, C. H. Dejong, P. J. Wahab, C. J. van Laarhoven, E. van der Harst, C. H. van Eijck, M. A. Cuesta, L. M. Akkermans, and H. G.

Gooszen. 2008. Probiotic prophylaxis in predicted severe acute pancreatitis: a randomised, double-blind, placebo-controlled trial. The Lancet 371:651-659.

23. Bianchi, A. A. and F. Baneyx. 1999. Stress responses as a tool to detect and characterize the mode of action of antibacterial agents. Appl. Environ.

Microbiol. 65:5023-5027.

24. Bolhuis, H., D. Molenaar, G. Poelarends, H. W. van Veen, B. Poolman, A.

J. Driessen, and W. N. Konings. 1994. Proton motive force-driven and ATP-dependent drug extrusion systems in multidrug-resistant Lactococcus lactis. J.

Bacteriol. 176:6957-6964.

25. Bolhuis, H., G. Poelarends, H. W. van Veen, B. Poolman, A. J. Driessen, and W. N. Konings. 1995. The Lactococcal lmrP gene encodes a proton motive force-dependent drug transporter. J. Biol. Chem. 270:26092-26098.

26. Bolotin, A., P. Wincker, S. Mauger, O. Jaillon, K. Malarme, J.

Weissenbach, S. D. Ehrlich, and A. Sorokin. 2001. The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403.

Genome Res 11:731-753.

27. Boonaert, C. J. P., Y. F. Dufrone, S. R. Derclaye, and P. G. Rouxhet. 2001.

Adhesion of Lactococcus lactis to model substrata: direct study of the interface.

Colloids and Surfaces B: Biointerfaces 22:171-182.

28. Bore, E., M. Hebraud, I. Chafsey, C. Chambon, C. Skjaeret, B. Moen, T.

Moretro, O. Langsrud, K. Rudi, and S. Langsrud. 2007. Adapted tolerance to benzalkonium chloride in Escherichia coli K-12 studied by transcriptome and proteome analyses. Microbiology 153:935-946.

29. Bortolini, O., A. Medici, and S. Poli. 1997. Biotransformations on steroid nucleus of bile acids. Steroids 62:564-577.

30. Bos, R., H. C. van der Mei, and H. J. Busscher. 1999. Physico-chemistry of initial microbial adhesive interactions--its mechanisms and methods for study.

FEMS Microbiol. Rev 23:179-230.

31. Bowe, C. L., L. Mokhtarzadeh, P. Venkatesan, S. Babu, H. R. Axelrod, M.

J. Sofia, R. Kakarla, T. Y. Chan, J. S. Kim, H. J. Lee, G. L. Amidon, S. Y.

Choe, S. Walker, and D. Kahne. 1997. Design of compounds that increase the absorption of polar molecules. Proc. Natl. Acad. Sci U. S. A 94:12218-12223.

32. Branda, S. S., S. Vik, L. Friedman, and R. Kolter. 2005. Biofilms: the matrix revisited. Trends Microbiol. 13:20-26.

33. Braoudaki, M. and A. C. Hilton. 2004. Adaptive resistance to biocides in Salmonella enterica and Escherichia coli O157 and cross-resistance to antimicrobial agents. J. Clin. Microbiol. 42:73-78.

34. Braoudaki, M. and A. C. Hilton. 2005. Mechanisms of resistance in Salmonella enterica adapted to erythromycin, benzalkonium chloride and triclosan. Int. J. Antimicrob. Agents 25:31-37.

35. Bremer, E. and R. Kramer. 2000. Coping with osmotic challenges:

osmoregulation through accumulation and release of compatible solutes in bacteria, p. 79-97. In G. Storz and R. Hengge-Aronis (ed.), Bacterial Stress Responses. ASM Press, Washington, D.C.

36. Brolund, A., K. Tegmark Wisell, P. J. Edquist, L. Elfstr÷m, M. Walder, and C. G. Giske. 2010. Development of a real-time SYBRGreen PCR assay for rapid detection of acquired AmpC in Enterobacteriaceae. Journal of Microbiological Methods 82:229-233.

37. Brooun, A., S. Liu, and K. Lewis. 2000. A dose-response study of antibiotic resistance in Pseudomonas aeruginosa biofilms. Antimicrob. Agents Chemother. 44:640-646.

38. Brown, M. R., D. G. Allison, and P. Gilbert. 1988. Resistance of bacterial biofilms to antibiotics: a growth-rate related effect? J. Antimicrob.

Chemotherap. 22:777-780.

39. Burton, J. P., P. A. Wescombe, C. J. Moore, C. N. Chilcott, and J. R. Tagg.

2006. Safety assessment of the oral cavity probiotic Streptococcus salivarius K12. Appl. Environ. Microbiol. 72:3050-3053.

40. Cain, B. D., P. J. Norton, W. Eubanks, H. S. Nick, and C. M. Allen. 1993.

Amplification of the bacA gene confers bacitracin resistance to Escherichia coli. J Bacteriol. 175:3784-3789.

41. Campanac, C., L. Pineau, A. Payard, G. Baziard-Mouysset, and C. Roques.

2002. Interactions between biocide cationic agents and bacterial biofilms.

Antimicrob. Agents Chemother. 46:1469-1474.

42. Candela, M., M. Centanni, J. Fiori, E. Biagi, S. Turroni, C. Orrico, S.

Bergmann, S. Hammerschmidt, and P. Brigidi. 2010. DnaK from Bifidobacterium animalis subsp. lactis is a surface-exposed human plasminogen receptor upregulated in response to bile salts. Microbiology 156:1609-1618.

43. Chapot-Chartier, M., E. Vinogradov, I. Sadovskaya, G. Andre, M. Mistou, P. Trieu-Cuot, S. Furlan, E. Bidnenko, P. Courtin, C. Péchoux, P. Hols, Y.

F. Dufrêne, and S. Kulakauskas. 2010. Cell Surface of Lactococcus lactis Is Covered by a Protective Polysaccharide Pellicle. J. Biol. Chem. 285:10464-10471.

44. Chatterjee, A., S. Chaudhuri, G. Saha, S. Gupta, and R. Chowdhury. 2004.

Effect of bile on the cell surface permeability barrier and efflux system of Vibrio cholerae. J. Bacteriol. 186:6809-6814.

45. Chen, G. and K. A. Strevett. 2001. Impact of surface thermodynamics on bacterial transport. Environ. Microbiol. 3:237-245.

46. Chen, G. and K. A. Strevett. 2003. Microbial surface thermodynamics and interactions in aqueous media. Journal of Colloid and Interface Science 261:283-290.

47. Cheung, Q. C., Z. Yuan, P. W. Dyce, D. Wu, K. DeLange, and J. Li. 2009.

Generation of epidermal growth factor-expressing Lactococcus lactis and its enhancement on intestinal development and growth of early-weaned mice. Am.

J. Clin. Nutr. 89:871-879.

48. Chipley, J. R. 1993. Sodium benzoate and benzoic acid., p. 11-48. In P. M.

Davidson and A. L. Branen (ed.), Antimicrobials in foods (2nd Ed.). Marcel &

Dekker, New York, USA.

49. Cloete, T. E. 2003. Resistance mechanisms of bacteria to antimicrobial compounds. Intl. J. Biodeter. & Biodegrad. 51:277-282.

50. Coleman, J. P. and L. L. Hudson. 1995. Cloning and characterization of a conjugated bile acid hydrolase gene from Clostridium perfringens. Appl.

Environ. Microbiol. 61:2514-2520.

51. Costerton, J. W., Z. Lewandowski, D. E. Caldwell, D. R. Korber, and H. M.

Lappin-Scott. 1995. Microbial biofilms. Annu. Rev. Microbiol. 49:711-745.

52. Dabour, N. and G. Lapointe. 2005. Identification and molecular characterization of the chromosomal exopolysaccharide biosynthesis gene cluster from Lactococcus lactis subsp. cremoris SMQ-461. Appl. Environ.

Microbiol. 71:7414-7425.

53. Dann, J. R. 1970. Forces involved in the adhesive process : I. Critical surface tensions of polymeric solids as determined with polar liquids. Journal of Colloid and Interface Science 32:302-320.

54. Davies, J., M. D. Burkitt, and A. Watson. 2009. Ascending cholangitis presenting with Lactococcus lactis cremoris bacteraemia: a case report. J. Med.

Case. Reports. 3.

55. de Vrese, M. and J. Schrezenmeir. 2008. Probiotics, Prebiotics, and Synbiotics, p. 1-66. In U. Stahl, U. Donalies, and E. Nevoigt (ed.), Food Biotechnology. Springer, Berlin / Heidelberg.

56. De, S., I, H. L. Van, W. M. Vande, H. Christiaens, and W. Verstraete. 1995.

Significance of bile salt hydrolytic activities of lactobacilli. J. Appl. Bacteriol.

79:292-301.

57. Delcour, J., T. Ferain, M. Deghorain, E. Palumbo, and P. Hols. 1999. The biosynthesis and functionality of the cell-wall of lactic acid bacteria. Antonie van Leeuwenhoek 76:159-184.

58. den Besten, H. M., E. J. van der Mark, L. Hensen, T. Abee, and M. H.

Zwietering. 2010. Quantification of the effect of culturing temperature on salt-induced heat resistance of bacillus species. Appl. Environ. Microbiol. 76:4286-4292.

59. Deshayes, C., F. Laval, H. Montrozier, M. Daffe, G. Etienne, and J. M.

Reyrat. 2005. A Glycosyltransferase Involved in Biosynthesis of Triglycosylated Glycopeptidolipids in Mycobacterium smegmatis: Impact on Surface Properties. J. Bacteriol. 187:7283-7291.

60. Dhar, N. and J. D. McKinney. 2007. Microbial phenotypic heterogeneity and antibiotic tolerance. Curr. Opin. Microbiol. 10:30-38.

61. Dheda, K., R. M. Warren, A. Zumla, and M. P. Grobusch. 2010.

Extensively Drug-resistant Tuberculosis: Epidemiology and Management Challenges. Infectious Disease Clinics of North America 24:705-725.

62. Donelli, G., I. Francolini, D. Romoli, E. Guaglianone, A. Piozzi, C.

Ragunath, and J. B. Kaplan. 2007. Synergistic Activity of Dispersin B and Cefamandole Nafate in Inhibition of Staphylococcal Biofilm Growth on Polyurethanes. Antimicrob. Agents Chemother. 51:2733-2740.

63. Donlan, R. M. 2001. Biofilms and device-associated infections. Emerg. Infect.

Dis. 7:277-281.

64. Donlan, R. M. and J. W. Costerton. 2002. Biofilms: survival mechanisms of clinically relevant microorganisms. Clin. Microbiol. Rev. 15:167-193.

65. Donovan, J. M. and A. A. Jackson. 1997. Transbilayer movement of fully ionized taurine-conjugated bile salts depends upon bile salt concentration, hydrophobicity, and membrane cholesterol content. Biochemistry 36:11444-11451.

66. Elkins, C. A. and D. C. Savage. 2003. CbsT2 from Lactobacillus johnsonii 100-100 is a transport protein of the major facilitator superfamily that facilitates bile acid antiport. J. Mol. Microbiol. Biotechnol. 6:76-87.

67. Erlandsen, S. L., C. J. Kristich, G. M. Dunny, and C. L. Wells. 2004. High-resolution visualization of the microbial glycocalyx with low-voltage scanning electron microscopy: dependence on cationic dyes 13. J Histochem. Cytochem. 52:1427-1435.

68. Evans, D. J., D. G. Allison, M. R. Brown, and P. Gilbert. 1991. Susceptibility of Pseudomonas aeruginosa and Escherichia coli biofilms towards ciprofloxacin: effect of specific growth rate. J. Antimicrob. Chemother. 27:177-184.

69. Farber, J. M. and F. Pagotto. 1992. The effect of acid shock on the heat resistance of Listeria monocytogenes. Lett. Appl. Microbiol. 15:197-201.

70. Feldman, S., M. Reinhard, and C. Willson. 1973. Effect of sodium taurodeoxycholate on biological membranes: release of phosphorus, phospholipid, and protein from everted rat small intestine. J. Pharm. Sci 62:1961-1964.

71. Fernandez Murga, M. L., D. Bernik, d. Font, V, and A. E. Disalvo. 1999.

Permeability and stability properties of membranes formed by lipids extracted from Lactobacillus acidophilus grown at different temperatures. Arch.

Biochem. Biophys. 364:115-121.

72. Fiedler, W. and H. Rotering. 1988. Properties of Escherichia coli mutants lacking membrane-derived oligosaccharides. J Biol. Chem. 263:14684-14689.

73. Flahaut, S., A. Hartke, J. C. Giard, and Y. Auffray. 1997. Alkaline stress response in Enterococcus faecalis: adaptation, cross-protection, and changes in protein synthesis. Appl. Environ. Microbiol. 63:812-814.

74. Flemming, H. C. and J. Wingender. 2010. The biofilm matrix. Nat Rev Micro 8:623-633.

75. Florez, A. B., de los Reyes-Gavilan CG, A. Wind, B. Mayo, and A.

Margolles. 2006. Ubiquity and diversity of multidrug resistance genes in Lactococcus lactis strains isolated between 1936 and 1995. FEMS Microbiol.

Lett. 263:21-25.

76. Foster, J. W. and H. K. Hall. 1990. Adaptive acidification tolerance response of Salmonella typhimurium. J. Bacteriol. 172:771-778.

77. Foster, J. W. and H. K. Hall. 1991. Inducible pH homeostasis and the acid tolerance response of Salmonella typhimurium. J. Bacteriol. 173:5129-5135.

78. Foster, T. J. and D. McDevitt. 1994. Surface-associated proteins of Staphylococcus aureus: their possible roles in virulence. FEMS Microbiol. Lett.

118:199-205.

79. Frank, K. L., E. J. Reichert, K. E. Piper, and R. Patel. 2007. In vitro effects of antimicrobial agents on planktonic and biofilm forms of Staphylococcus lugdunensis clinical isolates. Antimicrob. Agents Chemother. 51:888-895.

80. Franz, C. M., I. Specht, P. Haberer, and W. H. Holzapfel. 2001. Bile salt hydrolase activity of Enterococci isolated from food: screening and quantitative determination. J. Food Prot. 64:725-729.

81. Fuller, R. 1989. Probiotics in man and animals. J. Appl. Bacteriol. 66:365-378.

82. Garidel, P., A. Hildebrand, K. Knauf, and A. Blume. 2007. Membranolytic activity of bile salts: influence of biological membrane properties and composition. Molecules. 12:2292-2326.

83. Gasser, F. 1994. Safety of lactic acid bacteria and their occurrence in human clinical infections. Bull. Instr. Pasteur. 92:45-46.

84. Giaouris, E., M. P. Chapot-Chartier, and R. Briandet. 2009. Surface physicochemical analysis of natural Lactococcus lactis strains reveals the existence of hydrophobic and low charged strains with altered adhesive properties. International Journal of Food Microbiology 131:2-9.

85. Gilbert, P., D. G. Allison, and A. J. McBain. 2002. Biofilms in vitro and in vivo: do singular mechanisms imply cross-resistance? Symp. Ser. Soc. Appl.

Microbiol. 98S-110S.

86. Gilbert, P., J. Das, and I. Foley. 1997. Biofilm susceptibility to antimicrobials.

Adv. Dent. Res 11:160-167.

87. Gillis, R. J. and B. H. Iglewski. 2004. Azithromycin retards Pseudomonas aeruginosa biofilm formation. J. Clin. Microbiol. 42:5842-5845.

88. Gillis, R. J., K. G. White, K. H. Choi, V. E. Wagner, H. P. Schweizer, and B. H. Iglewski. 2005. Molecular basis of azithromycin-resistant Pseudomonas aeruginosa biofilms. Antimicrob. Agents Chemother. 49:3858-3867.

89. Gillis, R. J., K. G. White, K. H. Choi, V. E. Wagner, H. P. Schweizer, and B. H. Iglewski. 2005. Molecular basis of azithromycin-resistant Pseudomonas aeruginosa biofilms. Antimicrob. Agents Chemother. 49:3858-3867.

90. Godon, J. J., K. Jury, C. A. Shearman, and M. J. Gasson. 1994. The Lactococcus lactis sex-factor aggregation gene cluA. Mol. Microbiol. 12:655-663.

91. Gomez, Z. A., G. Kociubinski, P. Perez, E. Disalvo, and A. G. De. 2002.

Effect of bile on the lipid composition and surface properties of bifidobacteria.

J. Appl. Microbiol. 93:794-799.

92. Gotz, F. 2002. Staphylococcus and biofilms. Mol. Microbiol. 43:1367-1378.

93. Gould, I. M., K. Milne, G. Harvey, and C. Jason. 1991. Ionic binding, adaptive resistance and post-antibiotic effect of netilmicin and ciprofloxacin. J.

Antimicrob. Chemother. 27:741-748.

94. Goulter, R. M., I. R. Gentle, and G. A. Dykes. 2009. Issues in determining factors influencing bacterial attachment: a review using the attachment of Escherichia coli to abiotic surfaces as an example. Lett. Appl. Microbiol. 49:1-7.

95. Grahn, E., S. E. Holm, H. Lilja, and K. Sellgren. 1994. Interference of a Lactococcus lactis strain on the human gut flora and its capacity to pass the stomach and intestine. Scandinavian Journal of Nutrition 38:2-4.

96. Grasso, D., B. F. Smets, K. A. Strevett, B. D. Machinist, C. J. van Oss, R. F.

Giese, and W. Wu. 1996. Impact of physiological state on surface thermodynamics and adhesion of Pseudomonas aeruginosa. Environmental Science & Technology 30:3604-3608.

97. Grill, J. P., C. Manginot-Durr, F. Schneider, and J. Ballongue. 1995.

Bifidobacteria and probiotic effects: action of Bifidobacterium species on conjugated bile salts. Curr. Microbiol. 31:23-27.

98. Gueimonde, M., C. Garrigues, S. D. van, de los Reyes-Gavilan CG, and A.

Margolles. 2009. Bile-inducible efflux transporter from Bifidobacterium longum NCC2705, conferring bile resistance. Appl. Environ. Microbiol.

75:3153-3160.

99. Gueimonde, M., C. Garrigues, S. D. van, de los Reyes-Gavilan CG, and A.

Margolles. 2009. Bile-inducible efflux transporter from Bifidobacterium longum NCC2705, conferring bile resistance. Appl. Environ. Microbiol.

75:3153-3160.

100. Gulot, E., P. Georges, A. Brun, M. P. Fontaine-Aupart, M. N. Bellon-Fontaine, and R. Briandet. 2002. Heterogeneity of diffusion inside microbial biofilms determined by fluorescence correlation spectroscopy under two-photon excitation. Photochem. Photobiol. 75:570-578.

101. Habimana, O., C. Le Goff, V. Juillard, M. N. Bellon-Fontaine, G. Buist, S.

Kulakauskas, and R. Briandet. 2007. Positive role of cell wall anchored proteinase PrtP in adhesion of Lactococci. BMC Microbiology 7:36.

102. Habimana, O., M. Meyrand, T. Meylheuc, S. Kulakauskas, and R.

Briandet. 2009. Genetic Features of Resident Biofilms Determine Attachment of Listeria monocytogenes. Appl. Environ. Microbiol. 75:7814-7821.

103. Hagey, L. R., N. Vidal, A. F. Hofmann, and M. D. Krasowski. 2010.

Evolutionary diversity of bile salts in reptiles and mammals, including analysis of ancient human and extinct giant ground sloth coprolites. BMC. Evol. Biol.

10:133.

104. Hall-Stoodley, L. and P. Stoodley. 2005. Biofilm formation and dispersal and the transmission of human pathogens. Trends Microbiol. 13:7-10.

105. Hancock, I. C. 1991. Microbial cell surface architecture., p. 23-59. In N.

Mozes, P. S. Handley, H. J. Busscher, and P. G. Rouxhet (ed.), Microbial Cell Surface Analysis. VCH publishers, NewYork, USA.

106. Hecker, M., W. Schumann, and U. Volker. 1996. Heat-shock and general stress response in Bacillus subtilis. Mol. Microbiol. 19:417-428.

107. Heuman, D. M. 1989. Quantitative estimation of the hydrophilic-hydrophobic balance of mixed bile salt solutions. J Lipid Res 30:719-730.

108. Hoffman, A. F. 1994. Bile acids, p. 677-718. In M. Arias, J. L. Boyer, N.

Fausto, W. B. Jackoby, D. A. Schacter, and D. A. Shafritz (ed.), The liver:

biology and pathobiology. Raven Press, New York, USA.

109. Hoffman, A. F., G. Molino, M. Milaese, and G. Belforte. 1983. Description and simulation of a physiological pharmacokinetic model for the metabolism and enterohepatic circulation of bile acids in man. Cholic acid in healthy man. J.

Clin. Investig. 71:1003-1022.

110. Hoffman, L. R., D. A. D'Argenio, M. J. MacCoss, Z. Zhang, R. A. Jones, and S. I. Miller. 2005. Aminoglycoside antibiotics induce bacterial biofilm formation. Nature 436:1171-1175.

111. Hofmann, A. F. and K. J. Mysels. 1992. Bile acid solubility and precipitation in vitro and in vivo: the role of conjugation, pH, and Ca2+ ions. J. Lipid Res.

33:617-626.

112. Hofmann, A. F. 1999. The continuing importance of bile acids in liver and intestinal disease. Arch Intern Med 159:2647-2658.

113. Hoyle, B. D. and J. W. Costerton. 1991. Bacterial resistance to antibiotics: the role of biofilms. Prog. Drug Res. 37:91-105.

114. Hughes, V. M. and N. Datta. 1983. Conjugative plasmids in bacteria of the 'pre-antibiotic' era. Nature 302:725-726.

115. Hung, D. T., J. Zhu, D. Sturtevant, and J. J. Mekalanos. 2006. Bile acids stimulate biofilm formation in Vibrio cholerae. Mol. Microbiol. 59:193-201.

116. Hunter, R. C. and T. J. Beveridge. 2005. High-Resolution Visualization of Pseudomonas aeruginosa PAO1 Biofilms by Freeze-Substitution Transmission Electron Microscopy. J. Bacteriol. 187:7619-7630.

117. H°iby, N., T. Bjarnsholt, M. Givskov, S. r. Molin, and O. Ciofu. 2010.

Antibiotic resistance of bacterial biofilms. International Journal of Antimicrobial Agents 35:322-332.

118. Irie, Y., A. Preston, and M. H. Yuk. 2006. Expression of the primary carbohydrate component of the Bordetella bronchiseptica biofilm matrix is dependent on growth phase but independent of Bvg regulation. J Bacteriol.

188:6680-6687.

119. Islam, S., H. Oh, S. Jalal, F. Karpati, O. Ciofu, N. Høiby, and B. Wretlind.

2010. Chromosomal mechanisms of aminoglycoside resistance in Pseudomonas aeruginosa isolates from cystic fibrosis patients. J. Clin. Microbiol. & Inf.

15:60-66.

120. Jefferson, K. K. 2004. What drives bacteria to produce a biofilm? FEMS Microbiol. Lett. 236:163-173.

121. Johnson, B. J., J. Y. Lee, A. Pickert, and I. L. Urbatsch. 2010. Bile acids stimulate ATP hydrolysis in the purified cholesterol transporter ABCG5/G8.

Biochemistry 49:3403-3411.

122. Johnson, L. R. 2008. Microcolony and biofilm formation as a survival strategy for bacteria. J. Theor. Biol. 251:24-34.

123. Jones, G. W. and R. E. Isaacson. 1983. Proteinaceous bacterial adhesins and their receptors. Crit Rev. Microbiol. 10:229-260.

124. Juneja, V. K., T. A. Foglia, and B. S. Marmer. 1998. Heat resistance and fatty acid composition of Listeria monocytogenes: effect of pH, acidulant, and growth temperature. J. Food Prot. 61:683-687.

125. Karatan, E. and P. Watnick. 2009. Signals, regulatory networks, and materials that build and break bacterial biofilms. Microbiol. Mol. Biol. Rev. 73:310-347.

126. Karlowsky, J. A., M. H. Saunders, G. A. Harding, D. J. Hoban, and G. G.

Zhanel. 1996. In vitro characterization of aminoglycoside adaptive resistance in Pseudomonas aeruginosa. Antimicrob. Agents Chemother. 40:1387-1393.

127. Kawamoto, K., I. Horibe, and K. Uchida. 1989. Purification and characterization of a new hydrolase for conjugated bile acids, chenodeoxycholyltaurine hydrolase, from Bacteroides vulgatus. J. Biochem.

106:1049-1053.

128. Kim, W. S., J. Ren, and N. W. Dunn. 1999. Differentiation of Lactococcus lactis subspecies lactis and subspecies cremoris strains by their adaptive response to stresses. FEMS Microbiol. Lett. 171:57-65.

129. Kimoto, H., J. Kurisaki, N. M. Tsuji, S. Ohmomo, and T. Okamoto. 1999.

Lactococci as probiotic strains: adhesion to human enterocyte-like Caco-2 cells and tolerance to low pH and bile. Lett. Appl. Microbiol. 29:313-316.

130. Kimoto, H., K. Mizumachi, T. Okamoto, and J. Kurisaki. 2004. New Lactococcus strain with immunomodulatory activity: enhancement of Th1-type immune response. Microbiol. Immunol. 48:75-82.

131. Kimoto, H., S. Ohmomo, M. Nomura, M. Kobayashi, and T. Okamoto.

2000. In vitro studies on probiotic properties of lactococci. Milchwissenschaft 55:245-249.

132. Kimoto, H., S. Ohmomo, and T. Okamoto. 2002. Enhancement of bile tolerance in lactococci by Tween 80. J. Appl. Microbiol. 92:41-46.

133. Kimoto-Nira, H., M. Kobayashi, M. Nomura, and K. Sasaki. 2009. Bile resistance in Lactococcus lactis strains varies with cellular fatty acid composition: Analysis by using different growth media, p. 183-188. In .

134. Kimoto-Nira, H., M. Kobayashi, M. Nomura, K. Sasaki, and C. Suzuki.

134. Kimoto-Nira, H., M. Kobayashi, M. Nomura, K. Sasaki, and C. Suzuki.

Related documents