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Chapter 2: Imaging

2.7 Visualization

Visualization plays a key role in imaging research. Several issues can arise in the determination of whether a feature is truly present or if it is a characteristic of the beam. Visualization software can help manipulate the data such that unex- pected consequences of reconstruction like ring artifacts can be easily removed. The AvizoTMsoftware has useful features for materials science imaging with skele-

tonization, image segmentation, and registration 6. Another Java-based software

program is ImageJ, developed at the National Institutes of Health (NIH)7. ImageJ

enables users to import large files (on the order of 10 GB) of many different formats (tiff, jpeg, raw, HDF5) while extracting useful statistics from the images or vol- umes. These visualization programs are used to view Li-ion/Li-polymer batteries, additively manufactured samples, and crystals in the following chapters.

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