Identification of mutations in the coding
sequence of the proto-oncogene c-kit in a
human mast cell leukemia cell line causing
ligand-independent activation of c-kit product.
T Furitsu, … , L K Ashman, Y Kanayama
J Clin Invest.
1993;
92(4)
:1736-1744.
https://doi.org/10.1172/JCI116761
.
The c-kit proto-oncogene encodes a receptor tyrosine kinase. Binding of c-kit ligand, stem
cell factor (SCF) to c-kit receptor (c-kitR) is known to activate c-kitR tyrosine kinase, thereby
leading to autophosphorylation of c-kitR on tyrosine and to association of c-kitR with
substrates such as phosphatidylinositol 3-kinase (PI3K). In a human mast cell leukemia cell
line HMC-1, c-kitR was found to be constitutively phosphorylated on tyrosine, activated, and
associated with PI3K without the addition of SCF. The expression of SCF mRNA transcript
in HMC-1 cells was not detectable by means of PCR after reverse transcription (RT-PCR)
analysis, suggesting that the constitutive activation of c-kitR was ligand independent.
Sequencing of whole coding region of c-kit cDNA revealed that c-kit genes of HMC-1 cells
were composed of a normal, wild-type allele and a mutant allele with two point mutations
resulting in intracellular amino acid substitutions of Gly-560 for Val and Val-816 for Asp.
Amino acid sequences in the regions of the two mutations are completely conserved in all of
mouse, rat, and human c-kit. In order to determine the causal role of these mutations in the
constitutive activation, murine c-kit mutants encoding Gly-559 and/or Val-814,
corresponding to human Gly-560 and/or Val-816, were constructed by site-directed
mutagenesis and expressed in a human embryonic kidney cell line, 293T cells. In the
transfected cells, both c-kitR […]
Research Article
Find the latest version:
Identification
of Mutations in the
Coding Sequence of the
Proto-oncogene c-kit
in
aHuman Mast
Cell Leukemia Cell Line
Causing Ligand-independent Activation of c-kit Product
Takuma Furitsu,*Tohru Tsujimura,t Toshiharu Tono,t Hirokazu Ikeda, * Hitoshi Kitayama, *
Uichi
Koshimizu,*
Hiroyuki Sugahara,* JosephH.Butterfield,11 LeonieK.Ashman,"
Yoshio Kanayama, * Yuji Matsuzawa,*Yukihiko Kitamura,t and Yuzuru Kanakura *
*Second Department of Internal Medicine andtDepartmentof Pathology, OsakaUniversityMedical School, Suita565, Japan;
§ResearchInstitutefor MicrobialDiseases, Osaka University, Suita 565, Japan;I1Departmentof Internal Medicine, MayoClinic, Rochester, Minnesota;and 'Leukaemia Research Unit, HansonCentrefor Cancer Research, Adelaide, South Australia
Introduction
Thec-kit proto-oncogene encodes a receptor tyrosine kinase. Binding ofc-kit ligand,stem cellfactor(SCF)toc-kitreceptor
(c-kitR) is known toactivatec-kitR tyrosinekinase, thereby
leading to autophosphorylation of c-kitR on tyrosine and to
association of c-kitRwith substrates such as phosphatidylino-sitol 3-kinase(P13K).In a human mast cellleukemiacellline
HMC-1,c-kitRwasfoundto beconstitutivelyphosphorylated ontyrosine, activated, andassociated with PI3K without the
addition of SCF.Theexpression of SCFmRNAtranscriptin
HMC-1cells was not detectable by meansof PCR afterreverse
transcription
(RT-PCR)
analysis, suggestingthatthe constitu-tive activation of c-kitRwasligand independent. Sequencingof whole coding region of c-kit cDNA revealed that c-kit genes of HMC-1 cells were composedofa normal,wild-typeallele and a mutant allele with two point mutations resulting in intracellularamino acidsubstitutions ofGly-560 forVal and Val-816 for
Asp.Amino acidsequences in theregions ofthe twomutations arecompletely conserved in all of mouse, rat, and humanc-kit.
Inorder todeterminethe causal roleofthesemutationsin the
constitutiveactivation, murine c-kitmutantsencodingGly-559 and/or
Val-814,
correspondingtohumanGly-560 and/orVal-816, were constructed by site-directed mutagenesis and ex-pressed in a humanembryonic kidney cell line, 293T cells. In the transfected cells, both c-kitR (Gly-559, Val-814) and c-kitR (Val-814) were abundantly phosphorylated on tyrosine and activatedin immune complex kinase reaction in the
ab-senceofSCF,whereastyrosinephosphorylation and activation
of c-kitR(Gly-559) orwild-type c-kitRwas modest or little,
respectively.These results suggest that conversion ofAsp-816
toVal in humanc-kitRmay be anactivating mutation and
re-sponsible forthe constitutive activation of c-kitRin HMC-1 cells.(J. Clin.Invest.1993.
92:1736-1744.)
Keywords: proto-oncogene c-kit-point mutation*leukemia-tyrosine kinase-activationThiswork was presented in part as a poster at the 34th Annual Meeting
of the American Society of Hematology, Anaheim, CA, December
1992, and was published in abstract form (1992.Blood.80:302a). Addresscorrespondence to Dr. Yuzuru Kanakura, Second Depart-mentofInternal Medicine, Osaka University Medical School, 2-2, Ya-mada-oka, Suita 565, Japan.
Receivedfor publication 23 March 1993 and inrevisedformI June 1993.
The proto-oncogenec-kitwas identifiedasthe cellular homo-logueofthe oncogenev-kit present in the genome of
Hardy-Zuckerman 4-feline sarcoma virus that induces multicentric
fibrosarcomas in the domestic cat ( 1). The proto-oncogene c-kit encodes a transmembranetyrosinekinase receptor that is amemberof receptors for PDGF and CSF- 1 (2, 3).The
char-acteristicfeatures of the receptortyrosinekinasesubfamilyare anextracellulardomain made up of fiveimmunoglobulin-like
repeats, and anintracellular tyrosine kinase,which issplitinto twodomains by ahydrophilic insert sequence( 1-4). The
li-gandfor c-kitproducthasrecentlybeen cloned andvariously designatedas stem cell factor
(SCF),'
mastcellgrowth factor, kit ligand,orsteelfactor(5-12).Thec-kit gene is allelicwith the dominant whitespotting
(W) locus on mousechromosome5(13, 14),whereas the gene
encoding SCF resides atsteel(SI) locus on mouse chromo-some 10(7,9, 12).Mutationsateither theW/c-kitlocusorthe
SI /SCFlocusaffect variousaspectsof
hematopoiesis
andtheproliferation and/or
migration
ofprimordial
germ cellsandmelanoblasts during embryogenesis (4, 15-17). In
hema-topoiesis, both
WI
c-kit and SI/SCF mutationsaffect thehe-matopoieticstemcellcompartment andgive riseto hypoplas-tic anemia and a deletion ofmast cells (4, 15-17). Recent
experiments
have shown that c-kit product isexpressed
onmastcells (4, 16, 18) andon asmall,
progenitor-cell
fraction ( - 4%)of adult bone marrow cells(19-21),and that SCFactssynergistically
with otherhematopoietic
growthfactorsto stim-ulate thegrowth ofavariety
ofprogenitor
cells(5,
6, 22-24).
Inaddition tonormal hematopoietic cells,weand othershaveinvestigated theexpression and function of c-kit product in human leukemia cells (25-32). In human leukemia cell lines,theexpression of
c-kit
productwasdetected in erythro-leukemiacelllines (HEL, LAMA,and TF-1),megakaryocytic
leukemiacelllines
(MO7E
andMEG-0 1),andmast-cell leuke-mia cell line(HMC-l
) (25, 27, 31, 32). Also, c-kit productwasfoundtobeexpressed inmost casesofhuman acute myeloblas-tic leukemia (AML)andinsomecasesofchronic myelogenous leukemia (CML) inblastic crisis(26, 28-31). Further, SCF
inducedrapid tyrosine phosphorylationandactivation of c-kit
product,leadingtoproliferation ofM07Ecells and blast cells in a substantial fraction ofAML cases (27, 28). These results
1.Abbreviations used in thispaper: AML, acute myeloblastic leukemia; CML,chronicmyelogenousleukemia; HMC-1,human mast-cell leu-kemia cell
line-i;
P13K,phosphatidylinositol 3-kinase; rh,recombi-nanthuman; RTK,receptortyrosine kinase; SI,steel locus;SCF,stem
cellfactor; W, whitespottinglocus.
1736 Furitsuetal.
Abstract
J.Clin. Invest.
©TheAmerican Society forClinical Investigation,Inc.
0021-9738/93/10/1736/09 $2.00
suggestthat c-kit activationmaybeinvolved in some aspectof
excessive proliferation and aberrant differentiation of human leukemia cells. However, structuralabnormalities of c-kitgene contributingtoconstitutive, ligand-independent activation of the c-kitR kinase havenotbeen reported.
In this study, we have investigated the state of tyrosine phosphorylation and activation of c-kit product in human leu-kemia cells, and foundthat,regardlessof stimulationwith SCF, c-kit productisconstitutivelyphosphorylatedontyrosine resi-duesinHMC-1.Neither SCFmRNAtranscript nor biological activity of SCF were detectable fromHMC-1 cells, suggesting
that the activation of c-kit was not due toautocrine mecha-nism. The sequence of thec-kitgene revealed unique, as-yet-unidentified,two-point mutationsin thecytoplasmic domain,
resulting in aminoacid substitutions ofGly forValin codon 560and Valfor Aspincodon 816.Further,introduction ofthe mutated c-kit genes into cells ofa humanembryonic kidney
cellline, 293T, resultedinthegenerationof thec-kit-encoded
protein that wasconstitutively phosphorylatedontyrosineand activated without the addition of SCF.Thus,ourdata provide
the firstevidence that pointmutation(s)inc-kit geneis
capa-ble ofinducing constitutive activation ofc-kit product, and
raisethepossibility that the activating mutation(s) described
here may be involvedinoncogenesisofsomecell types, includ-ing mast cells andhematopoieticstemcells.
Methods
Reagents.Highly purified recombinant human (rh) GM-CSF
(rhGM-CSF)wasagiftfrom Drs. S. Clark and G. Wong(Genetic Institute, Cambridge,MA). rhSCFwasgenerouslyprovided byDr.K.M.Zsebo (Amgen Inc., Thousand Oaks, CA). Theanti-phosphotyrosine anti-body,amurine mAb generatedagainst phosphotyramine,was
gener-ouslysuppliedby Dr. B.Druker (Dana-Farber CancerInstitute,
Bos-ton, MA). Thespecificity of theanti-phosphotyrosine mAbwas de-scribedpreviously(33,34). Rabbit anti-human c-kitserum waskindly
provided by Dr.A.Ullrich (Max-Planck Institute ftirBiochemie,
Mar-tinsried, Germany).This antiserumwasgeneratedagainstasynthetic
peptidecorrespondingtoCOOH-terminal 16 amino acid residues of c-kitR (2).AmurinemAb(YB5.B8) thatreacts with theextracellular domain of human c-kit protein wasoriginally raised against human
AMLblast cells(21,35).Therabbit antiserum againstthe whole
mu-rinec-kit protein (36)wasgenerously donatedby Dr. P.Besmer
(Cor-nellUniversity GraduateSchool of Medical Science, New York). A rat
mAb(ACK-2) againsttheextracellulardomain of murine c-kit prod-uct(19) and the full length of murine c-kit cDNA clone were
gener-ously donatedbyDr.S-I.Nishikawa (Kumamoto University,
Kuma-moto, Japan). Rabbit anti-phosphatidylinositol 3-kinase (PI3K)
serum waspurchasedfrom Upstate Biotechnology,Inc. (Lake Placid,
NY); the
anti-PI3K
serum recognizes an 85-kD subunit ofP13K.Chemically defined serum-free medium (ASF-102) was purchased
fromAjinomoto(Tokyo, Japan); it containshumantransferrin,
insu-lin,andBSA.
Cell lines. HMC-1, a human mastcellleukemia cell line, estab-lished fromtheperipheral bloodfromapatientwithmastcell leuke-mia, was grown in Iscove's modified Dulbecco's medium
supple-mentedwith 10% horseserum(FlowLab,NorthRyde,Australia)as describedpreviously (37). M07E,ahumanGM-CSF and IL-3
depen-dentcellline,wasobtainedfromDr. SteveClark,GeneticsInstitute,
and wasoriginally established byAvanzi et al. from the peripheral
bloodfromaninfantwithacutemegakaryocyticleukemia(38).M07E
cellswerecultured inRPMI-1640medium (Nacalai Tesque, Kyoto, Japan) supplementedwith 10%FCS(FlowLab)and10ng/ml rhGM-CSF. HEL, a human erythroleukemia cell line, and NTI-4, human
fetus-derived fibroblast cell line, were obtained from the Japanese
Cancer Research ResourcesBank,andthis cell linewereadaptedto grow and maintained inRPMI 1640 supplemented with 10% FCS.A
humanembryonickidneycellline,293Twaskindly provided byDr. D.Baltimore (TheRockefellerUniversity, New York), and was de-rived fromhumanembryonickidneycellstransformedbyDNAfrom
humanadenovirus type 5(39).293T cellsweremaintained inDMEM
(NacalaiTesque) supplementedwith10%FCS.Inapreliminarystudy,
293T cellswerefoundtobecapableofexpressingagreateramountof c-kitproductthanCOS cellsaftertransfection of c-kit gene.
Flowcvtometry.Cells (5 x
105)
werewashedwith PBS andresus-pended in PBS containing 0.5% BSA (Sigma Chemical, St. Louis, MO),0.1% NaN3, and human Ig (1 mg/ml)toblockbindingof anti-bodiestoFc receptorsonthe cells.Cellswereincubated with YB5.B8
ormousemonoclonalIgG,control (Becton Dickinson andCo., Moun-tain View, CA)at40Cfor 30min,thenwashed three times with the buffer. Cellsweresubsequentlyincubated withfluorescein-conjugated
goat(Fab')2anti-mouseIgGantibody (Tago, Inc., Burlingame, CA)at
40C for 30min,andwashedtwicebefore analysis using a FACScan® flow cytometer (Becton Dickinson and Co.).
Immunoblotting. The proceduresof cell lysis, gel electrophoresis,
and immunoblotting were performed according tothe methods de-scribedpreviously (27, 28, 33, 34). Briefly, exponentiallygrowing cells
werewashedfreeofserum andgrowthfactors and incubated in
serum-free ASF- 102 medium for 16hat370Ctofactor-deprivethecells. The cells (107 cells suspended in I ml of ASF-102 medium) were then
exposedtorhSCF(100ng/ml)for 15minat370C.Afterstimulation,
cellswere washed with cold PBS and lysedin NP-40 buffer (20mM
Tris-HCl pH8.0, 137mMNaCl, 10% glycerol, 1%NP-40)containing
protease andphosphatase inhibitorsat4°Cfor 20 min.In some
experi-ments, lysisbuffercontaining 1%digitonin (Wako Pure Chemical
In-dustries, Ltd., Osaka, Japan)instead of1% NP-40wasusedtoexamine
theassociation ofc-kit product with P13K. Insolublematerial was
re-moved bycentrifugationat10,000 g for15 min at4°C,and celllysates
weresubjectedtoSDS-PAGE. Proteins were electrophoretically
trans-ferred from thegel onto apolyvinylidenedifluoride membrane
(Im-mobilon; Millipore Corp., Bedford, MA), and immunoblotting was
performedwith eitheranti-phosphotyrosinemAboranti-c-kit serum.
For immunoprecipitation, the lysates from rhSCF-stimulated or unstimulated cells were precleared with protein A-Sepharose beads
(Pharmacia AB, Uppsala, Sweden) for 2 h at4°C. The precleared
ly-sates werethen incubated withaYB5.B8 mAb andprotein
A-Sephar-osebeadstocollect theantigen-antibodycomplexes.The immunopre-cipitates werewashed fivetimes with lysisbuffer containing protease andphosphataseinhibitors,andsubjectedtoSDS-PAGEand
immuno-blotting with either anti-phosphotyrosine mAb, anti-c-kit serum, or
anti-PI3Kserum.
Immunecomplexkinase assay. Thecelllysateswereprepared from rhSCF-unstimulated cells using NP-40 lysis buffer.Theproductof c-kit
was immunoprecipitatedwiththeYB5.B8 mAb and protein
A-Sepha-rosebeads, andtheimmunecomplexes werewashed oncewithPBS,
twice with 0.5 MLiCl and50 mM Tris-HCl, pH 7.4,and once with
kinase buffer (10mMMnCl2,20 mMTris-HCl, pH 7.4)at4°C.Then, theimmune complexeswereincubated in kinase buffercontaining 10
;tCi/ml
[y-32P]ATP(DuPont/NENResearchProducts, Boston, MA) for 20 minat25°C, washed,andseparatedby SDS-PAGE.Thegelwasdried, and radioactive proteinsweredetectedby autoradiography. Oligonucleotide primers. PCR was performed by usingtwo comple-mentaryoligonucleotide primers for amplifying human SCF cDNA:
5'-ATGAAGAAGACACAACTTG-3'(184to203,sense)and
5'-AAG-GCATCAATGGATCTATT-3'(615to634, antisense).Forthe ampli-fication ofhuman c-kit cDNA, the following seven oligonucleotide primerswere used:primer 1, 5'-GATCCCATCGCAGCTACCGCG-3' (1 to21,sense); primer 2,5'-ATCTTCCCCATGATAAACAC-3'(964
5'-AGTGTGCTCAGAAAGACAGGATTGC-3' (3068 to3092,
anti-sense).The numbersinparenthesesrepresent the nucleotide numbers
onthecomplementarystrandsof each cDNA sequence.
cDNAsynthesisand PCRamplification. Total cellular RNAwas
isolated with aguanidine isocyanate method in combination with a
cesium chloride modification(40, 41). GenomicDNA wasprepared
from HMC-Icellsbythe standard method. Total RNAwasconverted into cDNAusingtheprimerspecificfor thesubsequentPCR
amplifica-tion. cDNAsynthesizedfrom 4Agof total RNAwasamplifiedina100
Mgl reaction mixture by aDNA thermal cycler (Perkin-ElmerCetus
Corp., Norwalk,CT)usingTaqDNApolymerasein 25cyclesof1-min
denaturationat
940C,
2-minannealingat550C,
and3-minsynthesisat720C.To minimizepossibleartifacts that could be caused by priming withPCR,the number of PCRcycleswaskepttoaminimum.
DetectionofhumanSCF mRNAtranscriptbymeansofPCRafter
reversetranscription(RT-PCR) analysis.Thesingle-strandcDNAwas
synthesizedfrom total mRNAof HMC-I andNTI-4cellswith both the
specificand random primers, andsubjected toPCR toamplify the 45l-bpDNAfragmentbetweennucleotide 184 and 634 ofhuman SCF
cDNA.PCRproductswereexaminedon1% agarosegel,transferredto
nitrocellulose filter(Schleicher&Schuell, Dassel, Germany),and then
hybridizedwith random 32P-labeledprobe.
Sequencingofc-kit cDNA.Sequencingof the wholecoding region
ofc-kitcDNAwasperformedinHMC-I cellsby usingfoursetsof
primers: primers 1-4, 2-6,3-6,and 5-7asdescribed above. The PCR
products amplified by these primers were gel purified, sequentially
treatedwith T4polynucleotide kinase and the Klenow fragmentof
DNApolymerase I,andsubclonedinto the EcoRV site ofBluescript KS(-) (Stratagene Corp.,LaJolla, CA).DNAsequences of four sub-clonesobtained from each PCRproductweredetermined and
com-pared with normal sequence of human c-kit cDNA(2). TheDNA
sequencingreactionwasperformedbythemethodofSangeretal.(42)
using
[32P]a-deoxycytidine
triphosphate (DuPont/NEN ResearchProducts).Inordertofurther confirm the mutations of c-kit mRNA, thesequencingin theregionsofc-kitmutationswasperformed directly
usingDNAfragmentsamplifiedbyindependentRT-PCR.
Site-directed mutagenesis andtransfection.Todirectlyexamine the causal roleof thec-kit mutations in activation of c-kittyrosinekinase
activity,site-directedmutagenesiswasperformed usingmurinec-kit cDNAbecauseof thefollowingreasons.First,amino acid sequences in theregionsof thetwoc-kit mutationsarecompletelyconserved
be-tweenmouseand human.Second,human SCFis knowntohavelittle effectoncellsexpressingmurine c-kit receptor(c-kitR) (6,7), whereas murine SCFcanexertits actionsthroughinteraction with both murine and humanc-kitRs (6, 7, 27, 43).Wetherefore usedacombination of murinec-kit cDNA andahuman293T celllineas atransfectant.
The geneencodingmurinewild-type c-kitRwasclonedinto
Blue-script IKS(-) andthe orientation of theinsertwasdetermined by
sequencing. Single-stranded uracil-containing DNA was prepared fromEscherichia colistrain CJ236(dut-ung-)asdescribed by Kunkel
(44).To generate genescontainingG-559 and V-814 mutations, two
oligonucleotidesof 5
'-CAATGGAAGGTTGGCGAGGAGATAAAT-3' and 5'-GGGCTAGCCAGAGTCATCAGGAATGAT-3'were
syn-thesized,annealedtothetemplateandextended. The double-stranded mismatchcontainingmutantplasmidsweretransformed into ung+ E. colistrain,and the clonescontainingeachmutation were then screened
bysequencing. TheDraI-BssHIIfragmentwith G-599 mutation and theNheI-MroI fragmentwith V-814mutationwereisolated and in-serted into thewild type c-kit clonetoconstruct mutantsencoding
G-559,V-8
14,
orbothof them. The fullcodingsequences of the wild-type andmutatedc-kitcDNA werethen released bySmaIandHindIIIrestrictiondigestion, isolated,andinserted into the expression vector
pSV2. Theinsertswere resequencedtoconfirm the orientation and mutations within theexpressionvectors.
The expression vectors containing wild-type and mutated c-kit
cDNA were transfected into 293T cells by the calcium phosphate method as described previously (45). The cells were cultured in DMEMcontaining 10% FCS and fed every 3 d with fresh medium. To
determine the expression of c-kit product in the transfected 293Tcells, the transfectantswere incubated with 100MCi/ml [35S]methionine (DuPont/NEN ResearchProducts) for 6h, andlysedwith NP-40lysis
buffer. The labeled c-kit product was then immunoprecipitated with a ratanti-mouse c-kit mAb (ACK-2) and analyzed by SDS-PAGE and autoradiography. For the analysis of protein tyrosine phosphorylation in thetransfectants, cell lysates were subjected to SDS-PAGE and
im-munoblottingwithananti-phosphotyrosine mAb. To examine the
ac-tivationandtyrosine phosphorylationofc-kitproduct,c-kitproductof each transfectant was immunoprecipitated with rabbit antiserum against murine c-kitproteinfrom thelysates, and then subjected to in vitro immune complex kinase assay and immunoblotting with an
anti-phosphotyrosinemAbasdescribed above.
Results
Constitutivetyrosine phosphorylation ofc-kit product in HMC-Icells. The expression of c-kit productwasfirst examined with
ananti-c-kit mAb,YB5.B8, which recognizes the extracellular domain of human c-kitproduct(35). Flow cytometry analysis showed that c-kitproduct wasexpressedon HMC-1, M07E, and HEL cells at an almost equal level (Fig. 1 A). Despite the high level of c-kit expression onHMC- 1 cells, proliferation of HMC-I cells wasnotaugmented by thetreatmentwithrhSCF
(datanotshown), whereas rhSCF was reportedtoinduce prolif-eration of M07E andHELcells(27,31).
Toexaminethe impaired effect of rhSCF on proliferation of HMC- 1 cells, we investigated the effectofrhSCFontyrosine kinase activity in HMC-1, M07E, and HEL cells. The cells were removedfrom growthfactors for16 h and thenstimulated
with 100 ng/ml of rhSCF for 15 minat 37°C. Changes in
tyrosine phosphorylation were detected by immunoblotting
withamAbspecific for phosphotyrosine.After stimulation of M07E and HEL cells with rhSCF, increased phosphotyrosine was observedinproteins particularlyatmolecularmassof145 kD(Fig. 1 B). In HMC- 1 cells, by contrast, tyrosine
phosphor-ylation of 145-kD protein was observed even in the absence of exogenousrhSCF, and rhSCF treatment resulted in only a modest increase in tyrosine phosphorylation of the protein
(Fig. 1 B).
Inorder todetermine ifthe 145 protein wasc-kitproduct,
c-kitproductwasimmunoprecipitatedand analyzed by
immu-noblotting with either anti-phosphotyrosinemAb or anti-c-kit serum.Asshown inFig. 1 C, tyrosine phosphorylationof c-kit
productwasdetectedinHMC-Icellsregardless ofrhSCF
stimu-lation, while itwasconsiderably increasedbystimulationwith
rhSCFinM07E andHELcells.
Activation
of
c-kitproduct in HMC-J cells. Ligand bindingtoc-kit product is knowntoactivate the c-kitreceptortyrosine kinase, thereby leading to c-kit-tyrosyl autophosphorylation
andtheassociation of c-kit with itssubstratessuch as
phospha-tidylinositol 3-kinase (PI3-kinase)(4, 46-48). To determine whether or notthe constitutive tyrosine phosphorylation of c-kitproductin HMC-l cells wasaccompanied by activation of
c-kitreceptortyrosine kinase,weexamined the association of
c-kit product with P13K andthe autokinase activityofc-kit products inthe cells.
HMC-1, M07E,and HELcells were factor starved and
ex-posed
tomedium aloneorrhSCF(100ng/ml)for 15min at37°C, and then lysed with lysis buffer containing 1% digitonin. Beforeandafter stimulationwith rhSCF, c-kit products were
immunoprecipitated withaYB5.B8 mAb from the cell lysates
anddivided intotwoaliquots, oneof which was subjected to
A
a)
E HMC-1
M07E
HEL:U
Relative
log
fluorescence
HMC-1
M07E
HEL
I
m
m
SCF
- + - + -+
cc-P13K
Z-0*--85kD
B
HMC-1 MO7E HELSCF - + -+
MW(kD)
208-
100-
71-C
HMC-1 M07E HELSCF - + - + - +
cc-PTyr
S"~ t~ 5S14k--4 -*-145kDcx-c-kit a l *-145kD
Figure1.Expression of c-kit productonHMC-I, M07E,and HEL
cells(A)andeffectsofrhSCFontyrosine phosphorylation ofcellular
proteins (B) and c-kit product (C) inthe celllines.Flow cytometric
analysisofthe surfacebinding ofamonoclonal anti-c-kit antibody
(YB5.B8)toHMC-1, M07E,and HEL cells (A). Cellswereincubated
in eithernegative control antibody(---)orYB5.B8(-), washed,
incubated withfluorescein-conjugatedgoat(Fab')2anti-mouseIgG
antibody,andanalyzedonaFACScanO.Foridentificationof
phos-photyrosine-containing proteins, celllysateswereobtained before and
aftertreatmentwith rhSCF (100 ng/ml) for15 minat370C and
subjectedtoimmunoblot with anti-phosphotyrosinemAb (B).To
examinechangesintyrosine phosphorylation of c-kitproduct,c-kit
productwasimmunoprecipitatedwith YB5.B8fromcelllysates
be-fore and 15min after rhSCF stimulation,andimmunoblotwas
performed with eitheranti-phosphotyrosinemAboranti-c-kit serum(C).
immunoblottingwith anti-PI3Kserumand another with
anti-c-kitserum.Basedona-c-kitimmunoblotdataasshown in the
lower portion of Fig. 2, approximately equivalentamountsof c-kit productswereimmunoprecipitatedbefore and after
stimu-lation with rhSCF in each cell line.Bycontrast,a-PI3K immu-noblotasshown in theupperportion of Fig. 2revealed that the
85-kD subunit of P13Kwasco-immunoprecipitatedwith
anti-c-kit antibody only afterstimulation with rhSCF in twocell
lines, M07E and HEL, whereas itwasco-immunoprecipitated
in HMC-1 cellsevenbeforestimulationwith rhSCF.
Wenextexamined the autokinase activity of c-kit products
in immune complex kinase assay.Productsof c-kitwere
im-munoprecipitatedfrom NP-40 lysates of HMC-1, M07E,and
HEL cellsbeforetreatmentwith rhSCF,and assayedfor
auto-kinase activity. Tyrosine auto-kinase activity of c-kitproductswas
ct-c-kit
1
*1
45kD
0MR1 Om* ON -am
Figure2. Association of c-kitproductwith P13K inHMC-1,M07E,
and HEL cells. Cellsweretreated with rhSCF(100 ng/ml)for 15 minat370Candlysedwith 1%digitonin.c-kitproductand c-kit-as-sociated moleculeswereimmunoprecipitatedwith YB5.B8 and
pro-teinA-Sepharosebeads from the celllysatesbefore and after stimula-tion with rhSCF. Theimmunoprecipitatesweredivided into two ali-quotes,separatedby SDS-PAGE,and subjected to immunoblot
analysesof P13K(upperpanel) and c-kit product (lowerpanel).
readily
detectableinHMC-l
cellsin the absence of SCFstimu-lation,whereas itwas
only
faint inM07EorHELcells(Fig.3).
In this experiment, almost equal amounts of c-kitproducts
wereimmunoprecipitatedinthesesamples (datanot
shown).
Absence ofSCF mRNA transcripts in HMC-I cells. One of thepossible explanationsfor the results shown inFigs. 1-3wasthatHMC- cells
might
produceSCF. Theexpressionof SCF mRNA transcriptswas examinedby RT-PCR SouthernblotanalysisinHMC-1 cells and also in NTI-4 cells thatwereused asapositivecontrol.As shown inFig. 4,SCF mRNA
transcript
wasnotobservedinHMC-1 cells,whilea45l-bp fragmentof
SCFmRNA was
easily
detected in NTI-4 cells. Further, the culture supernatant ofHMC-l did not haveanyactivities instimulating proliferation
orinducing
tyrosinephosphorylation
of c-kit product in M07E cells(datanot shown). Thus, the constitutive tyrosine phosphorylation andactivation of c-kitproductinHMC-1cellswerenotattributedtoautocrine mech-anism.
N> /Figure3. Immune
com-ti/ A\> plexkinaseassayfor
c-Ov/
of/wt>
kit tyrosine kinase
ac-tivityinHMC-l,M07E,
and HEL cells. c-kit product was
immuno-MW (kD)
precipitated
with
YB5.B8 from NP-40
ly-208- sates before stimulation withrhSCF, andthe c-kit -* immunoprecipitates
U $^3 wereincubated in
ki-nasebuffer containing
1
00
10ACi/ml
[y-32P]ATPfor 20minat250C,
washed, and separated 71- by SDS-PAGE.
Incor-poration of 32P into c-kit productwasvisualized by autoradiography. In thisstudy, theimmunoprecipitatesfrom HMC- 1,M07E,and HEL cells containedapproximately equivalentlevelsof c-kit products.
Figure 4. RT-PCR anal-ysis of human SCF
mRNAinHMC-l and NTI-4 cells.
Single-X\ strand cDNAswere
2j/\/>/synthesizedfrom total
\>28> +N/ mRNA ofHMC-l and
C NTI-4cells, and the
45l-bpfragment of
hu-manSCF cDNA (nu-cleotides 184 through 634)wasamplified by PCR. The PCR
prod-451bp30 ucts weresubjected to
451 bp
*_
l%
agarose gel, trans-(184- 634) 7 ferredtonitrocellulosefilter, hybridized with random32P-labeled
probe, and then de-tected by autoradiog-raphy.
Mutations inc-kit cDNA. An alternate mechanism which
might explain the constitutive tyrosine phosphorylation and
activation of c-kitproducts in HMC-1 cells would be due to
mutations inthec-kitproto-oncogene. Southern blot analyses
ofgenomic DNA from HMC-1 using EcoRI, HindIII, and BamHI showedneitherrearrangement nor amplification in
c-kitgene as comparedwithnormal human placenta (data not
shown). However, sequencing of c-kit cDNA demonstrated thatc-kitcDNAofHMC-1 cells carries heterozygous transi-tions in codon 560
(GTT
--GGT,
nucleotides 1699through
1701 intheregion between the membrane and the
ATP-bind-ing domains)
and codon816(GAC
GTC,
nucleotides2467through 2469 inthephosphotransferasedomain), which result
intheamino acid substitutions ofGly-560 for Val and Val-816
for Asp,respectively.Thesetwopointmutationswereobserved in cDNA clonesgeneratedfrom threeindependentPCR
prod-ucts, and also confirmedbydirectsequencingofPCRproducts
amplified independently (Fig. 5). Further, sequencing of cDNAfragment (nucleotides964through 2594) coveringthe regions of both mutations was performed in four subclones. This analysis showed that two subclones had bothmutations,
but theremainingtwosubcloneshad neither mutation. These results indicate that c-kit genes ofHMC-1 cellsarecomposedof
anormal wild-typeallele anda mutant allelewith two
point
mutations.Inaddition, the deletions of 12-nucleotide sequence
(nu-cleotides 1550through 1561),the extracellular4-amino acid sequence(Gly-Asn-Asn-Lys),and3-nucleotidesequence
(nu-cleotides 2163 through 2165) were observed in both normal and mutant alleles of HMC- 1. The former deletion was
previ-ously reported to be due to alternative splicing of mRNA(49);
thelatter was also consideredasthe result ofalternative
splic-ing of mRNA between exon 14 and 15, in light of data on the humanc-kitgenome(50).
Mutation(s) leads to activation of c-kit receptor tyrosine kinase. Amino acidsequencesinthe regions ofthe twoc-kit
mutations identified in HMC-l cells arecompletely conserved in all ofmice, rats, and humans. In order to determine the direct role of the c-kit mutations in ligand-independent activa-tion of c-kit products, the expression vectors containing
nor-mal ormutatedmurine c-kitgenes weretransfected into cellsof a humanembryonic kidney cell line, 293T. This combination could minimize the effect of SCF, which might be producedby
the transfected cells, on c-kit product expressed on 293T cells (see Methods).
Weused site-directedmutagenesisto construct mutant
mu-rine c-kitR containing substitutions of Gly forVal at codon
559and/orValforAsp at codon814,whichcorrespondedto Gly-560 and/or Val-816 of mutant human c-kitR,
respec-5'
554
-EG
Val[
TA
Ginr
ALG
T \C A T G
LGu
AA
LysE
AGG[
Val[ETA
/T -_30 )y-
l/
Val[EQT
311G
Glu
I
G
-A_ _
lie
TIPI
[A|
56-Asn[A
5'
A
]Asp
- 810C
AT
G
T]Phe
G]Gly
T
T
]Leu
_- AC'
c Ala
A
;G]Arg
A
G--
Aij
Asp/Val
-816 c
A-T
Ile
c
A-A]
LysG .
A-A Asn
T
G-A]
Asp
T
c
Ser
T
A
]
Asn
-822
Figure 5. Nucleotidesequenceincludingthe mu-tationsites of c-kit cDNAobtainedfromHMC-I
cells. Shownareresults from direct sequencing of c-kitDNAfiagmentsfromamino acid residues 554 to566 andthose 810 to 822. HMC-1 cells
werefound tocarryheterologousmutationsof
c-kitgeneat codons560 and816. These two muta-tionswereobserved incDNA clones from three independent PCR products, and sequencing of
cDNA fragments (nucleotides 964through 2594) infourclonesrevealed that the c-kitgeneof HMC-l iscomposed ofanormal andamutant allele. Thearrowsindicate the mutation sites, and thealterednucleotides and amino acidsare
un-derlined.
A
MW(kDa) K K K
9,
170-
116-
76-x9 0,
(5
*<--l
45k
Da-<-l 25kDa
aFF
..B
AW(kDa)
(
216-
105-- 145kDa -<-l25kDa
Figure 6.Expressionofc-kitproduct(A)andidentification of
phosphotyrosine-containing proteins (B)
in 293T cells transfected withwild-typeand mutated murine c-kit genes. The cellsweretransfected withwild-typeormutatedmurine c-kit genes
encoding
wild-type
c-kitR(wild
type),c-kitR(Gly-559;G-559),c-kitR(Val-814;V-814),orc-kitR(Gly-559,Val-814; G-559, V814). Also,293T cells that didnotreceive transfection wereused as anegative control (notransfection).(A) The indicated cellswerelabeledfor 6hwith 100IlCi/ml
[35S]methionine
andlysed.c-kit productwasthenimmunoprecipitatedandanalyzedbySDS-PAGE andautoradiography. (B) Lysatesof the indicated cellswerenormalized forproteincontent, andweresubjectedtoSDS-PAGE andimmunoblottingwithan
anti-phosphotyrosine
mAb.The mobilities of the mature (145-kD) and immature(125-kD)forms of c-kitproductsareindicatedatright.tively.Whenwild-typeormutatedc-kitgenes were transfected
in 293Tcells, thec-kitgene products weresynthesizedin the
cellsas 145- and 125-kDproteins(Fig. 6 A), whichwere the mature and immature forms of c-kit products, respectively
(51). Although each transfectant expressed approximately equal amounts ofc-kit products, a major c-kit product that
incorporated
[35S]methionine
wastheimmature form inthe cellsexpressingc-kitR(Gly-559, Val-814)orc-kitR(Val-814),whereasitwasthe mature formin the cellsexpressing c-kitR (Gly-559)orwild-type c-kitR (Fig. 6 A).
Beforeandafter transfection ofc-kitgenes,changes in
tyro-sine
phosphorylation
ofproteins
weredetected by immunoblot-tingwithanti-phosphotyrosine
mAb(Fig.
6B).Ascompared with nontransfected 293Tcells,littleor noincreaseintyrosine phosphorylationwasobservedin the cells expressing wild-typec-kitR. However, a number ofproteins,
including
125- and145-kDproteins, wereheavily phosphorylatedontyrosinein the cellsexpressingc-kitR(Val-814)orc-kitR (Gly-559,
Val-814). Also, a modest degree of tyrosine phosphorylation of 125- and 145-kD proteins was notedin the cells expressing
c-kitR (Gly-559).
A
B
-<*-145kDa
_i _1 <(-1 25kDa
Inordertofurther examine thetyrosine
phosphorylation
and activation of c-kitproductsin the transfected cells,c-kit productswereimmunoprecipitatedand assayed by immuno-blottingwithananti-phosphotyrosinemAb and also forauto-kinase activity. In the absence of SCF, both c-kitR(Val-814)
andc-kitR(Gly-559, Val-814)were foundtobe abundantly
phosphorylated on tyrosine, and c-kitR (Val-814) was also phosphorylated on tyrosine, albeit to a much lesser degree, whereaswild-typec-kitRwasnot(Fig. 7 A). Further, in accord with the findings onthe immunoblotting analysis, immune
complexkinaseassayshowedastrikingautokinase activity in both c-kitR(Val-814)and c-kitR(Gly-559, Val-814),aweak activity in c-kitR(Gly-559),and littleor noactivity in
wild-typec-kitRin the absence of SCF (Fig. 7B).
Discussion
Many receptor tyrosine kinases were first identified as
retro-viral oncogenes such as v-erbB,v-fms, andv-kit thatencode
oncogenicforms of epidermal growth factor R (EGFR), CSF-1
R,
andc-kitR,respectively(1, 46, 52). Comparativenucleo-:1r
l45kDa 125kDaFigure 7. Tyrosine phosphorylation (A) and acti-vation (B) of wild-type and mutated murine c-kitR expressed in 293T cells in the absence of ex-ogenous SCF. (A) c-kit product was immunopre-cipitated from the lysates of the indicated cells, andsubjectedtoSDS-PAGE and immunoblotting with an anti-phosphotyrosine mAb. (B) Immune complex kinase assay for c-kittyrosinekinase
ac-tivity. c-kit productwasimmunoprecipitatedfrom lysates from theindicated cells, and the immuno-precipitateswereincubated in kinase buffer
con-taining 10
gCi/ml
[y-32P]ATPfor 20 min at 25°C, washed, and separated by SDS-PAGE.In-corporationof 32P intoc-kit productwas visual-ized byautoradiography. Themobilities of the
mature(145-kD) and immature (125-kD) forms of c-kitproductsareindicatedatright.
Activating MutationofProto-oncogene c-kit 1741
tide sequencing analysesrevealed avarietyofstructural
differ-ences between the oncogenes andtheir proto-oncogenes:
v-erbB
andv-kit proteins lacktheextracellular binding domain of the receptorsthatnegatively regulatesthereceptortyrosine
kinase activity; v-fms differs from c-fms by nine scattered
amino acid substitutionsand byaCOOH-terminal structure
(3, 46, 53, 54). These structural alterations in the oncogenes activate constitutively the tyrosine kinase function,
thereby
leadingtocelltransformation and
tumorigenicity
(46).Inad-dition,
it hasbeen reported that even point mutations in aproto-oncogene can lead to activation of the corresponding tyrosine kinase receptor, as has been shown by
"activating"
mutations of c-fms that induce morphologic transformation,
anchorage-independent
growth, andtumorgenicity
in mouseNIH 3T3 cells (53, 54). In the case of c-kit, however, all of
mutations so far describedin mice, rats, and humansare
re-ported to affect either the structure of c-kitorc-kit expression, resulting in a decreaseinc-kit tyrosine kinase activity (4).
In this study, we have shown that c-kit product is constitu-tively phosphorylated on tyrosine and activated in HMC-1 cells even in the absence of SCF-stimulation. Further, c-kit productwasfoundto beassociated with PI3K without the exog-enous SCF. The ligand-induced association ofc-kit product with P13K is reported to depend on
autophosphorylation
of c-kit product on tyrosine residues where the associationoccurs(48). Therefore, tyrosine residuesthat are
constitutively
phos-phorylated in HMC- 1 cells may be indistinguishable from those phosphorylated byligand stimulation. However, neither mRNA transcript nor biological activity of SCF were detect-ablefrom HMC-1cells. These results suggest that c-kit product inHMC-1 cells is constitutively activated in a ligand-indepen-dent manner.
Sequencing analyses have revealed that c-kit genes of
HMC-l cellsarecomposedof anormal, wild-type alleleanda mutant allele with two point mutations resulting in amino acid substitutions ofGly-560 for Val and Val-816 for Asp in the
intracellular domain. In order to analyze the effect ofthese previously unidentified substitutionsonc-kit kinase function, mutated murine c-kit
genes encoding murine c-kitR
(Gly-559 and/or Val-814), which were constructedbysite-directed mu-tagenesistocorrespondtohumanc-kitR
(Gly-560 and/or Val-816), were transfectedin ahuman embryonic kidney cell line, 293T cells.In thetransfected cells, wild-typec-kitR
was neither phosphorylated ontyrosine invivo nor activated inimmune complex kinase reaction in theabsence of SCF. By contrast, both c-kitR (Gly-559, Val-814) and c-kitR (Val-814) were strikingly phosphorylated ontyrosine and activated in the ab-sence ofSCF. Further, c-kitR (Gly-559)was also phosphory-lated on tyrosine and activated, albeit to a much lesser degree. Given the fact that human SCF is hardly active on murine c-kitR(6, 7)evenif itmightbeproduced from 293T cells, these results indicatethatconversionofaspartic acid-814tovalineinmurine c-kitRis anactivating mutationandconsiderably more efficient than that ofvaline-559 to glycine in inducing c-kit kinase activity.It istherefore suggestedthat amutationof
hu-man c-kit geneatcodon816(Asp -* Val) playsamajor rolein
the constitutive activation of c-kit product in
HMC-1
cells, whileamutationatcodon 560 (Val -- Gly) hasaminor role.The activating mutation of
c-ffms
geneisreportedtoaffect intracellular transport ofhumanCSF-1R
(54). Whena wild-type human c-fms gene was transfectedintomurine NIH/3T3cells,
theimmature formofhumanCSF-lR
(gpl
30'f?)
wasrapidly
convertedtothematurecell surface formofCSF-IR
(gpl50 'fm). By
contrast,
whenamutatedhumanc-fms
genebearing
anactivating
mutation(Leu-301
--Ser)
wastrans-fected,
theconversion fromtheimmaturetothematureformofCSF-IRwas
inefficiently
processed.
In thisstudy,
wefoundthat theimmature form
(
125kD)
ofc-kitRwaspredominantly
observedin cells
expressing
c-kitR
(Gly-559, Val-814)
orc-kitR
(Val-8 14),
whereasthe matureform(145
kD)
ofc-kitR
was
predominant
in cellsexpressing
c-kitR(Gly-559)
orwild-type
c-kitR. Theseresultsprovide
additionalsupport
for the ideathat Val-814 in murinec-kit, corresponding
toVal-816 inhumans,
isanactivating
mutation.Ithas been
reported
thatonly
alowbutdetectable levelofconstitutive activationisnoticeableinthe shorter formof
mu-rine c-kit
product,
which lackstheextracellular4aminoacid sequence(Gly-Asn-Asn-Lys)
duetothealternativesplicing
ofmRNA
(49).
This shorter formofc-kitisfoundinthe halfof normal murine or rat c-kit cDNA clones(40, 49).
Also inHMC-l
cells,
wefoundthat thehalfof c-kitcDNA clones lacksthesamefour-aminoacid sequence inbothnormal and
mu-tated c-kitgenes.In ordertocompare c-kitR
(Gly-559 and/or
Val-8
14)
with theshorter form ofwild-type
c-kitRand tode-termine thedirectrole ofthec-kit mutationsin theconstitutive
activation,
weused theshorter formofwild-type
murine c-kitcDNA as a
template
for the site-directed mutagenesis in thisstudy.
In thetransfected 293Tcells, tyrosine
phosphorylation
and activation were
barely
detectable in the shorter form ofc-kitR
whichwasusedas anormalcontrol,
whereasthey
werereadily
detectableinc-kitR
(Gly-559
and/or Val-814).
Theseresultsindicatethat c-kitmutations identifiedin this
study
areconsiderably
moreactive than the shorter form ofc-kit,
and that theshorter formisunlikely
tocontributetotheconstitu-tiveactivationofc-kit
product
inHMC-1 cells.Although
themutations described herearefoundtoleadtotheconstitutive activationof c-kit
tyrosine
kinase activity,the role of the c-kitactivating
mutations in leukemogenesisre-mainstobe elucidated. Ina
previous study,
we showed thatc-kit
product
wasphosphorylated
ontyrosine
infreshly
pre-pared
leukemiccells ofsomeAMLcases evenin theabsenceofSCF stimulation
(28). However,
occurrencesoftyrosine
phos-phorylation
of c-kitproduct
observedin theAMLcaseswere not sostriking
asthat inHMC-1 cells(28). Therefore,
anacti-vating
mutationatresidue 816(Asp
-- Val) maynotoccurfrequently
in denovoAML,
while it is still possible that certain mutations ofc-kitR
otherthanc-kitR (Val-8 16) maycontrib-ute tothemodest
degree
of c-kit activation in AML cells. It isinteresting
to notethat HMC-l is a human mast-cell leukemiacellline
(37),
andthatamouse mastocytoma cell line, P-8 15, hasalsobeen reportedto exhibit constitutive activation of c-kitRin theabsence of detectable autocrine production of SCF(48), although
thesequence of the c-kit alleles expressed byP-815cells isnotcharacterized at this time. Further, a
c-kitR/
SCF system isknownto
play
acrucial role in the growthanddifferentiation ofmastcells (4, 16). It has been recently
re-ported
thatapparently selective growth of human mast cells isobservedin
long-term
culture of human cord-blood orbone-marrowcells
exceptionally
with either murine or human SCF butnotwithotherhematopoietic growth factors (43, 55, 56).Also,
von Ruden et al.have recently reported that transfer ofmice results inthe development of lethal systemic mast cell
leukemia, and suggested thatv-erbBmay use partsofa signal
transduction pathwaynormally coupled toc-kitR(57). These
findings raisethe possibility that activating mutations of c-kit
describedhere may beinvolvedin neoplastic transformation of mast cells, althoughit isas yet unclearwhetherthesemutations by themselvescan leadtofactor-independentgrowthand
tu-morgenicity. It would beofconsiderable interest to examine whether thetransfection of nontumorigenic or
factor-depen-dent cell lineswith the mutantforms ofc-kitgenesresults inthe
production ofatumorigenicor factor-independent phenotype. In addition to hematological malignancies, expression of
c-kit
proto-oncogene has been found in varioustumorssuch as lungcancer and germ cell tumors (58, 59). Further, the aminoacidsequenceinaregionofthe kinase domain containing
Asp-816ofhumanc-kit product is widelyconservedinmany other RTKs such as receptorsfor PDGF, CSF- 1, andinsulin(60).
Therefore, it is possiblethat the uniqueactivating mutationin codon 816 of human c-kitR, or a similar mutation in other RTKs, mayparticipate inthedevelopmentofavarietyof
ma-lignancies.Furtherstudiesonc-kitmutants will be necessary to
understand themechanisms by which growth factorreceptors influenceoncogenesisand normal growth control.
Acknowledgments
Wewould like to thank Dr. K. M. Zsebofor generously providing rhSCF, Dr. A. Ullrich for rabbit anti-human c-kit serum, Dr. P. Besmerfor rabbit anti-murine c-kit serum,Dr.S-I.Nishikawa for rat anti-murine c-kit mAb (ACK-2) and full length of murine c-kit cDNA
clone,and Dr. D.Baltimore for 293T cell line.
This workwassupported in part by grants from theMinistryof Education, Science and Culture ofJapan, the Research Foundation for Cancer and Cardiovascular Diseases(Osaka),andtheInamori Foun-dation.
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