Daniel B. Stouffer
Integrative Ecology Group Estaci´on Biol´ogica de Do˜nana - CSIC
Sevilla, Spain [email protected]
• A true complex system • Experimentation is
impossible (or impractical)
• A true complex system • Experimentation is impossible (or impractical) • A modeling approach is imperative
• Stability of small sub-webs
• “Complexity-stability” debate
• More diversity and more connections = Greater stability • More diversity and more connections = Lower stability • Greater empirical realism increases stability
• Stability of small sub-webs
• More diversity and more connections = Greater stability • More diversity and more connections = Lower stability • Greater empirical realism increases stability
• Stability of small sub-webs
• Omnivory is a stabilizing force • Weak interactions confer stability • Predator-prey body size ratios
• “Complexity-stability” debate
• More diversity and more connections = Greater stability • More diversity and more connections = Lower stability • Greater empirical realism increases stability
• Stability of small sub-webs
• Omnivory is a stabilizing force • Weak interactions confer stability • Predator-prey body size ratios
• What is meant by stability?
• More diversity and more connections = Greater stability • More diversity and more connections = Lower stability • Greater empirical realism increases stability
• Stability of small sub-webs
• Omnivory is a stabilizing force • Weak interactions confer stability • Predator-prey body size ratios
• What is meant by stability?
• Return to equilibrium after perturbation • Stabilization of dynamics
• Greater species persistence
• What is the role of food-web modules?
• How does persistence of food-web modules in isolation
• A key to the success of leading static food-web models 0 1 2 3 4 Number of prey, k/2z 0.0 0.2 0.4 0.6 0.8 1.0 Cumulative distribution 0 1 2 3 4 Number of predators, m/2z 0.0 0.2 0.4 0.6 0.8 1.0 0 1 2 3 4 Number of links, r/2z 0.0 0.2 0.4 0.6 0.8 1.0
• Species can be ordered in one dimension • Prey selection
• Prey selection: Random
• Species can be ordered in one dimension • Prey selection: Contiguous
• Prey selection: Contiguous
• Species can be ordered in one dimension • Prey selection: Contiguous
• Contiguous predation
• Random predation
• Predators are indifferent to the identity of their prey
• Contiguous predation
• Predators are indifferent to the identity of their prey
• Contiguous predation
• Predators specialize on species which have some
characteristic features
• Random predation
• Predators are indifferent to the identity of their prey
• Contiguous predation
• Predators specialize on species which have some
characteristic features
• Is there a signature in the data indicating the
empirically observed mechanism?
• Just the appearance of motifs is not significant • Compare to null hypothesis of a randomized network
• Compare to null hypothesis of a randomized network • Could the observed motif pattern occur at random?
• Just the appearance of motifs is not significant • Compare to null hypothesis of a randomized network • Could the observed motif pattern occur at random?
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile Stoufferet al., PRSB (2007)
• Compare to null hypothesis of a randomized network • Could the observed motif pattern occur at random?
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile Stoufferet al., PRSB (2007)
• Just the appearance of motifs is not significant • Compare to null hypothesis of a randomized network • Could the observed motif pattern occur at random?
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile Stoufferet al., PRSB (2007)
• Compare to null hypothesis of a randomized network • Could the observed motif pattern occur at random?
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile Stoufferet al., PRSB (2007)
• What is the relationship between persistence of
modules in isolation and their influence on community food-web persistence?
• How does a module’s influence on community
food-web persistence relate to its presence in community food-webs?
• We will model module and food-web dynamics and
• Allometric scaling of metabolic parameters× dBi dt = riGiBi − X k=pred xkykBkFki eki dBi dt = −xiBi + xiBi X j=prey yiFij − X k=pred xkykBkFki eki
†Yodzis and Innes, Am. Nat. (1992) ×Broseet al., Ecol. Lett. (2006)
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Allometric scaling of metabolic parameters • Required inputs:
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions • Species’ body masses
• Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions • Species’ body masses
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions • Species’ body masses • Interaction strengths
• Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions • Species’ body masses • Interaction strengths
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions • Species’ body masses • Interaction strengths
• Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions⋆ • Species’ body masses • Interaction strengths
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions⋆ • Species’ body masses • Interaction strengths
• Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions⋆ • Species’ body masses • Interaction strengths
• Bioenergetic population dynamics model • Allometric scaling of metabolic parameters • Required inputs:
• Network of interactions⋆ • Species’ body masses • Interaction strengths
Tri−trophic chain Exploitative competition Apparent competition Omnivory
Tri−trophic chain Exploitative competition Apparent competition Omnivory
0 1000 2000 3000 4000 Timesteps 0.00 0.20 0.40 0.60 0.80
Tri−trophic chain Exploitative competition Apparent competition Omnivory
Tri−trophic chain Exploitative competition Apparent competition Omnivory
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chain Tri−trophic Exploitative competition Apparent competition Omnivory• How does presence of modules relate to persistence?
• Generate a food web, assign masses, assign interaction
• How does presence of modules relate to persistence?
• Generate a food web, assign masses, assign interaction
strengths. . .
• The food web has some number of each module:
• Tri-trophic food chain • Omnivory
• Exploitative competition • Apparent competition
• How does presence of modules relate to persistence?
• Generate a food web, assign masses, assign interaction
strengths. . .
• The food web has some number of each module:
• Tri-trophic food chain • Omnivory
• Exploitative competition • Apparent competition
• How does the number of each module present
10−6 10−5 10−4 10−3 0.0 500.0 1000.0 1500.0 2000.0 −1.0 −0.8 −0.6 −0.4 −0.2 0.0 0.2 C on d iti on al pr ob ab ilit y d en sit y Nmodule M o d el re si d u al s
10−6 10−5 10−4 10−3 0.0 500.0 1000.0 1500.0 2000.0 −1.0 −0.8 −0.6 −0.4 −0.2 0.0 0.2 0.4 C on d iti on al pr ob ab ilit y d en sit y Nmodule M o d el re si d u al s
10−6 10−5 10−4 10−3 0.0 500.0 1000.0 1500.0 2000.0 −1.0 −0.5 0.0 C on d iti on al pr ob ab ilit y d en sit y Nmodule M o d el re si d u al s
10−6 10−5 10−4 10−3 0.0 500.0 1000.0 1500.0 −1.0 −0.8 −0.6 −0.4 −0.2 0.0 0.2 C on d iti on al pr ob ab ilit y d en sit y Nmodule M o d el re si d u al s
10−6 10−5 10−4 10−3 0.0 1000.0 2000.0 3000.0 −1.0 −0.8 −0.6 −0.4 −0.2 0.0 0.2 C on d iti on al pr ob ab ilit y d en sit y Nmodule M o d el re si d u al s
-0.2 -0.1 0.0 0.1 0.2 Persistence factor
• Persistence of isolated modules is not the same as the
• Presence of modules has clear influence on community
• Presence of modules has clear influence on community
food web persistence
• There may be significant dynamic justifications for
observed food-web structure
• Caution must be taken when attempting to scale up
• There may be significant dynamic justifications for
observed food-web structure
• Caution must be taken when attempting to scale up
from modules to community food webs
• Species appear to participate in interactions which
maximize community persistence and not necessarily their own persistence
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile
• Some empirical food webs exhibit fewer instances of
omnivory and greater instances of exploitative and apparent competition
S1 S2 S3 S4 S5 D1 D2 D3 D4 D5 D6 D7 D8 -1.0 -0.5 0.0 0.5 1.0 Normalized profile
• We hypothesize that these food webs are less
• Management decisions
• Management decisions
• What motifs does a species participate in?
• Management decisions
• What motifs does a species participate in?
• Invasive species
• Lu´ıs Amaral, Juan Camacho, Wenxin Jiang • Jordi Bascompte
• Members of the Integrative Ecology Group and Amaral Lab • NSF IGERT Graduate Research Fellowship
• NU ChBE Teaching Apprenticeship fellowship • CSIC JAE Post-doctoral Fellowship