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Vol. 12, No. 5 JOURNAL OF CLINICAL MICROBIOLOGY, Nov.1980,p.684-689

0095-1137/80/1 1-0684/06$02.00/0

Evaluation

of the MS-2

System

for

Rapid Identification of

Enterobacteriaceae

A. W. McCRACKEN,'* W. J. MARTIN,2 L. R. McCARTHY,3 D. A. SCHWAB,4 B. H.

COOPER,'

N. G. P. HELGESON,' S. PROWANT,' ANDJ. ROBSON3

Department ofClinicalMicrobiology, BaylorUniversity Medical Center, Dallas, Texas75246';Department

of Pathology, Microbiology Section, University of California-Los Angeles Center forthe Health Sciences LosAngeles, California900242; ClinicalMicrobiologyLaboratories,NorthCarolinaMemorial Hospital,

ChapelHill,North Carolina27514';andScrippsMemorialHospital, Department of Pathology,Nuclear Medicine, La Jolla, California920374

The precision, accuracy, and other performance characteristics ofthe MS-2

(Abbott Laboratories, Diagnostic Division, Dallas, Tex.) systemfor the

identifi-cation of Enterobacteriaceae were evaluated ina collaborative study involving

three clinical laboratories. Whenidentifying 150unknown,codedorganisms,the MS-2 systemwas97%, 98%,and 93%accurate,respectively,in threelaboratories. The system showedanoverall accuracyof 94% whencomparedwithconventional

manual tube methodsinidentifying 1,154clinicalisolates of 26speciesof

Enter-obacteriaceae.Discrepanciesbetweenautomated andconventional methodswere

chieflycausedby biochemicalvariants, especiallyamong Enterobacter species.

TheMS-2systemwasrapidandsimpletooperate andproduced printed results

ofbacterial identification in 5 h. The cost ofdisposable components compared favorably with commercial, visuallyreadsystems for identifying

Enterobacteri-aceae.

Automation

hasbeen

successfully applied

to

mostclinical

microbiological methods,

including

antimicrobial susceptibility testing, blood

cul-ture

monitoring, detecting urinary

tract infec-tion

and,

lately, identifying

bacteria.

Identifica-tion

of

gram-negative rods, especially

Entero-bacteriaceae,

isa

major

function of the clinical

microbiology laboratory

andis

performed

both as a

guide

to antimicrobial treatment and for

epidemiological

purposes. A

rapid,

precise,

and accurate automated method of identification

could, therefore,

have considerable valuein

di-agnostic

bacteriology.

Vannestand his

colleagues (R.

D.

Vannest,

D.

Brunson, M.

Cornell,

H.

Terk,

B.

Perry,

andR.

Wilborn,

Abstr. Annu. Meet. Am. Soc.

Micro-biol.

1979,

C(H)86,

p.

360) reported

a

preliminary

study of

rapid,

automated identification of

en-teric

bacteria

using

the MS-2

(Abbott

Labora-tories,

Diagnostic Division,

Dallas,

Tex.)

system.

Variations of this system have also been

applied

to

antimicrobial

susceptibility testing (H.

J.

Spencer,

P.

Welaj,

R.

Vannest,

V.

Hargrove,

and L.

Williams,

Abstr. Annu. Meet. Am. Soc.

Mi-crobiol. 1978,

C204,

p.310; L. R.

McCarthy,

J.C.

Sherris,

and J. P.

Anhalt,

Abstr. Annu. Meet.

Am.Soc. Microbiol. 1978,

C205,

p.

310),

screen-ing for

urinary

tractinfection

(L.

R.

McCarthy,

C. L.

Corlett,

and J. A.

Robson,

Abstr. Annu.

Meet.Am.Soc. Microbiol.

1979,

C(H)95,

p.

362),

andmonitoring of blood cultures (R. L. Holland,

N. G. P. Helgeson, A. W. McCracken, and B. H.

Cooper,

Abstr. Annu. Meet. Am. Soc. Microbiol.

1979,C4, p. 310). The present paper describes a

collaborative study at three medical centers (Baylor University Medical Center, UCLA

Med-ical

Center, and University of North Carolina)

toevaluate the MS-2 system for rapid

identifi-cationof Enterobacteriaceae.

MATERIALS AND METHODS

MS-2system.The MS-2system used inthis study consisted of the following components: an analysis

module, a control module, a bacterial identification cartridge, an actuator, and an inoculum dispenser.

(i) Analysismodule. The analysis module is both anelectro-optical scanning device and an

incubator-shaker. The latterfunction is required for

antimicro-bialsusceptibilitytesting and urine screening, both of

which can be performed simultaneously with bacterial identification. The electro-optical scanning system consistsoflight-emitting diodes (which emit light at a wavelength of 665 nm) and matched photodetectors.

Theanalysis module has eight positions. Position 8 is used for bacterial identification. Positions1through 7 are used for antimicrobial susceptibility testing and

urinescreening.

(ii) Control module.The controlmodule contains amicroprocessor and performs the followingfunctions: (a)controls the operationof theanalysismodule, (b) stores data obtained from the analysis module, (c) identifies bacteria byapplying data from the analysis 684

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MS-2 BACTERIAL IDENTIFICATION SYSTEM 685 moduleto aprobabilitymatrix, and (d)printsoutthe

resultsofbacterial identification.

(iii) Bacterial identification cartridge. This cartridge isadisposable plastic containerconsistingof 20optically clear chambers. Seventeen chambers con-tainlyophilized biochemical substratesand,withone

exception, indicators whichchangecolorinresponse

tothemetabolic reactions of thetestorganism. The exception is chamber18which is usedtodetect indole production andtowhich0.05ml of Kovacsreagent is added after incubation. Chamber 17is leftemptyto

reduce the risk ofadding Kovacs reagenttothewrong chamber. Chambers 19 and 20 arealso empty. The activesubstances in the identificationcartridgesand theirreactionsarelisted in Table1.The17reactions wereselected for theirabilityto distinguishbetween pairs of bacterial speciesandtogivedefinitive reac-tions within 5 h in the MS-2 system. Identification cartridgesarestoredat2to8°Cuntil used.

Before use, one cartridge from each shipment is testedbyrehydration ofchambers9and 16

(L-arabi-noseandD-xylose,respectively)with0.2mlofsterile,

deionizedwater. Theresultant colors are compared with a standard color chart. Significant differences from thechart indicate that thecartridgesmay have

beendamaged byoverheating during shipping.

(iv) Actuator. Theactuatoris

placed

inposition

8of theanalysis module where it stabilizes the car-tridge and aligns it correctly for transmitted light readingstobe taken.

(v) Dispenser. Thedispenseruses a5-ml

dispos-ablesyringe calibratedtodeliver0.2ml ofa

standard-izedsuspensionof bacteriatoeachfunctional chamber

of theidentificationcartridge.

Method for bacterial identificationbythe

MS-2 system.Eighteen- totwenty-four-hour cultures of TABLE 1. Active biochemicalsinMS-2 identificationcartridgesandtheirreactions

Testcon- Reaction

Chami- Active substance.centration

c

berno. ( wt/

vol)

1 Glucose 1.0 Fermentation'

2 Lysine 1.0 Decarboxylation' hydrochloride

3 Ornithine 1.0 Decarboxylation' hydrochloride

4 Sodium citrate 0.2 Utilization

5 Sodium malonate 0.5 Utilization

6 Esculin 0.125 Hydrolysis

7 Urea 2.0 Hydrolysis

8 Adonitol 1.0 Fermentation 9 L-Arabinose 2.0 Fermentation

10 i-Inositol 2.0 Fermentation

11 Lactose 2.0 Fermentation

12 Mannitol 2.0 Fermentation

13 L-Rhamnose 0.5 Fermentation

14 Sorbitol 2.0 Fermentation

15 Sucrose 2.0 Fermentation

16 D-Xylose 0.5 Fermentation

17 Empty

18 L-Tryptophan 0.125 Indoleproduction

19 Empty

20 Empty

aSealedtoprovidereducedoxygentension.

test organisms are obtained from blood agar plates, andanoxidase test is performed on each.All oxidase-positive bacteria are excluded.

Representative colonies of the test organism are touched with a sterile loop, transferred to 5 ml of sterile,deionized water,andblended in a Vortex mixer. This step isrepeated until the turbidity of the suspen-sion visually matches a 0.5McFarland barium sulfate standard. Within30min ofpreparation, 0.2ml of the bacterial suspension is delivered into each chamber of the identification cartridges. Chambers 1, 2, and 3, containing glucose, lysine, and ornithine,respectively,

aresealedwith polyester filmtoprovideconditions of reduced oxygen tension.

The cartridges are placed in the actuator in position

8intheanalysis module. The system is activated by a series ofkeyboard entries which are sequentially prompted by instructions in the print-out. Among the entries areinformation for specimen identification and dateand time of testing.

Initial readings of transmitted light are taken au-tomatically for each chamber, and the data for each organism are stored in the control module. The car-tridge is then removed, placed in an incubator at 35 to 37°C for5h,andreinserted into the analysis module for the final reading. The print-out of the data in-cludes: (i) the assignment of a positive or negative sign

toeach biochemical test; (ii) the identity of the organ-ism (up to fiveorganisms are listed in descending order oflikelihood);and (iii) a percent likelihood value for each organismlisted. Percent likelihood is an expres-sion of the degree ofseparation between organisms as defined by the formula: probability of first choice organism/sum ofprobabilities of allorganisms in data base x 100. When the likelihood of a correct identifi-cation is low, the print-out includes the following message: "Warning: low assurance of identification. Percent likelihood is less than 80%."

Evaluation of precision and accuracy. In the first phase of this study, theprecision of the MS-2 system wasassessed in thefollowing way.

Atotal of 150strainsofEnterobacteriaceae were givento eachlaboratory as unknown, coded samples. The150organisms were identified in parallel by the MS-2 and byaseries ofconventional tube tests (Table 2). With the conventional tests, identification was madeby reference to Edwards and Ewing (4). During thisphase, for reasonsdiscussed later, modifications weremade to theidentification algorithm of the

MS-2.

In the second phase,theaccuracy of the MS-2 was evaluated by testing 1,154 strains of Enterobacteria-ceaeobtainedfrom clinical sources with the MS-2 and conventional methods as described for phase 1. In-cludedwere26species ofEnterobacteriaceaein num-bersthat reflected their relative frequency of isolation from clinicalspecimens.

Allorganisms tested during this studywerestored

at-60°C indefibrinated blood for later use in clari-fying inter- or intra-laboratory discrepancies. In the

secondphase,whentherewasdisagreement between

theMS-2andconventional identification, both

meth-odswererepeated.Ifthere was stilldisagreement, the organism was submitted to the manufacturer who VOL.12,1980

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686 McCRACKEN ET AL.

TABLE 2. Reactions in conventional tubed media usedfor identificationof Enterobacteriaceae(6)a

Biochemical reaction Medium Fermentation of:

Arabinose Glucose Lactose Rhamnose Sucrose Xylose Adonitol Inositol Mannitol

Sorbitol

Dulcitol

Control

Decarboxylationof:

Lysine Ornithine

Control Utilization of:

Acetate Citrate Malonate Other tests:

Ureahydrolysis Voges-Proskauer

reac-tion

Esculin reduction

Phenylalanine deami-nation

Indoleproduction Deoxyribonuclease

production

Dextrose, lactose, and

sucrose

fermenta-tion andH2S

produc-tion

Motility

Oxidaseproduction

Fermentation broth base withAndradeindicator plus carbohydrate sub-strate

Fermentationbrothbase

with Andrade indicator

Moeller base plus amino

acidsubstrate Moellerbase

Acetateagar Simmonscitrateagar Malonatebroth

Christensenureaagar Methyl

red-Voges-Pros-kauer broth

Esculin broth

Phenylalanineagar

Indoletestbroth DNasetestmedium Triplesugarironagar

Motilitytestmedium Patho-Tecb

aUnless otherwise noted, the methods listed are

basedonthosein reference6.

bGeneralDiagnostics,Warner-LambertCo.,Morris Plains,N.J.

recodedand reissued itas anunknown forrepeatof conventional identification by allthree laboratories. The final identification of a controversial organism wasthatonwhich at least two laboratoriesagreed.If allthreestilldisagreed, asubcultureoftheorganism

wassent toareferencelaboratorywhose identification

wasacceptedasfinal.

RESULTS

Theaccuracyof the MS-2systemand

conven-tionalidentifications in allthreelaboratoriesis

shownin Table3.The MS-2resultswerethose

obtained after modifications had been madeto

the identification algorithm. The precision of

identification of150 bacterial strains by MS-2

and by conventional methods is compared in

Table 4. With the MS-2, all three laboratories

correctlyidentified 135 (90%) organisms.

Of

the

150 strains, 148 (99%) were correctly identified

byatleasttwoofthe three laboratories.

The results of identification by conventional

methodswereverysimilartothoseobtained by

MS-2. Ail three laboratories agreedonthe

cor-rectidentity of 136 (91%) of the 150strains,and

atleasttwoofthe three laboratories agreedon

the identity of

all

150strains. Correct

identifi-cationwasachieved in 149(99%) strains.

A comparison by species of automated and

conventional identifications of 1,154 strains of

Enterobacteriaceae isolated

from

clincal

speci-mensin all threelaboratories combinedisshown

in Table 5. In assessing accuracy, the correct

identification was taken as that obtained by

conventional methodson whichatleasttwoof

TABLE 3. Accuracy ofidentification byMS-2 and conventional methodsof150strainsof Enterobacteriaceae in three laboratories

No.of No. of

correct incorrect No.not

Site Method identifica- identifi- identi-tions(%)

cations

fied

(%)

BUMC' MS-2 146(97) 4(3) 0(0) Conventional 145(97) 4(3) i (<1) UNCb MS-2 147(98) 3(2) 0(0)

Conventional 149(99) 1(cl) O(O) UCLAC MS-2 139(93) 8(5) 3(2)

Conventional 141(94) 8(5) 1(<1)

aBaylorUniversityMedical Center.

bUniversity ofNorthCarolina.

cUCLA Medical Center.

TABLE 4. Precisionof identificationby MS-2 and conventional methodsof150strainsof Enterobacteriaceae in three laboratories

No.(%)identified by: Precisionof identification

Conven-MS-2 tional method Correctly identified in all 135(90) 136(91)

three laboratories

Correctly identified in two 13(9) 13(9) ofthreelaboratories

Incorrectly identified intwo ia (<1) la(<1) of three laboratories

Incorrectly identified in ail la(<1) 0(0)

three laboratories

aSamefirstchoice in bothorall laboratories.

J. CLIN. MICROBIOL.

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(4)

MS-2 BACTERIAL IDENTIFICATION SYSTEM 687

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688 McCRACKEN ET AL.

the three laboratories agreed. With the MS-2,

1,080 (94%) isolates were

correctly

identified,

and no identification was made in 11

(1%)

in-stances. Of the 63

(5%)

discrepancies,

40 were

correctly

identified

by

MS-2 as the second

choice.

Moreover,

in21of the40second

choices,

the

print-out

containeda

warning

of low percent

likelihood

(less

than

80%)

ofcorrect

identifica-tion of the first

choice,

indicating

a need for

further testing.

Of

the 1,080 strains

correctly

identified

by

MS-2asfirst

choice, only

86

(8%)

were

accompanied by

the

warning

statement

andwould have

required

further

testing.

Table6shows the accuracy of the MS-2

sys-temin each of the three laboratories.

DISCUSSION

In a

preliminary

report

(R.

D.

Vannest,

D.

Brunson, M.

Cornell,

H.

Terk,

B.

Perry,

and R.

Wilborn,

Abstr. Annu. Meet.

Am.

Soc.

Micro-biol.

1979,

C(H)86,

p.

360),

when 296 strains of

enteric

bacteria were tested

by

MS-2 and

by

conventional

methods of

identification,

there

was 95% agreement between the two methods.

In both

methods,

bacterial

identification

was

based

onthe

interpretative

data ofEdwards and

Ewing (4)

and other similarsources

(1,

3,

5).

The

present

collaborative

study

has

expanded

and

confirmed

the

findings

of the

preliminary

report. The

precision

of the MS-2 in

identifying

150

strains

ofEnterobacteriaceae exceeded 90% in

the three

laboratories,

and the accuracy

ranged

from93 to98% when the

programming changes

discussed

below

weremade.

The

MS-2 with

modified software hadan

ac-curacy of 94% in

identifying

1,154

strains of

Enterobacteriaceae. This is

similar

to the

ac-curacy

reported

for commercial identification

systems whichareread

visually

after4h

(1,

2)

or

overnight

incubation

(7,

9,

10).

Only

afew strains of severaluncommon

spe-cies,

notably

Serratia

rubidaea,

Klebsiella

ozaenae,

Klebsiella

rhinoscleromatis,

and

Yer-sinia

enterocolitica,

were tested. No

examples

of Aeromonas

hydrophila,

Plesiomonas

shigel-loides, Yersinia

pseudotuberculosis,

or

Pasteu-TABLE 6. AccuracyofMS-2identificationin three laboratories

No. of No.not

,s. t ~No.cor- No.incor- N.fo Site strains

N.crect

<

inco>rec

identified

tested (%) react(%) react(%) BUMC« 371 (100) 350(94) 21(6) 0 UNCb 371(100) 342(92) 23(6) 6 (2)

UCLAC 412(100) 388(94) 19(5) 5(1) aBaylorUniversityMedical Center.

bUniversityof NorthCarolina. cUCLA Medical Center.

rella

species

wereincluded. Further studies are

required to evaluate theperformance of the

MS-2with these organisms.

Although not a member of the family

Enter-obacteriaceae, Acinetobacter calcoaceticus

(formerly var. anitratus-this study was

com-pleted before the publication of the Approved

Lists ofBacterial Names [8]) was included in

the data base of the instrument because it is

oxidase negative and gives a positive glucose reaction in the MS-2.

There were several reasons for adjusting the

programming of the control module during the

first phase ofthis study. First, the threshold of

positivity for eachbiochemical reaction was

ad-justed so that the MS-2 interpretation closely

matched that from conventional tubed media.

Second, the program which compared the set of

biochemical reactions of each organism to a

matrix of the expected positive reactions was

originally based on data from the Center for Disease Control, Atlanta, Ga. (3, 5). As data

from the MS-2 became available, the reactivity

ofeachspecies in the variousbiochemical tests

was

determined,

andthe datamatrix was revised

withthesefigures. Third, it was noted after the

threshhold had been adjusted and the data

ma-trix had been modified that a few strains of

certain species (for example,

Klebsiella

pneu-moniae and Serratia rubidaea) could not be

distinguished

from each other, largely because

the teststrains of these species gave one or two

atypical

biochemical

reactions. In these

in-stances, the computeralgorithm was altered by

weighting specific biochemical

reactions

to

achieve the correct identification.

The reasons for discrepancies between MS-2 and conventional methods are currently being

investigated.

Many of the disagreements were

among the various

species

of

Enterobacter

(4 of

11

non-identifications

and 30 of 63

misidentifi-cations)

and mayreflect the variability of

bio-chemical

reactions

among members of this

ge-nus. In six

instances,

Enterobacter cloacae was

misidentified as an H2S-producing organism;

thus, the lack ofatest forH2S production may

account for some of these discrepancies. The

four discrepancies with Shigella species

in-volved Shigella sonnei that were

misidentified

as

Salmonella

enteritidis bioser.paratyphi A. Further MS-2 data on this organism must be

accumulated so that the program can be

ad-justedtodistinguish S. sonnei from S.paratyphi

A.

The manual

operations

involved in MS-2

identification take less than 4 min and are at

leastassimpletoperform asconventional

meth-ods. The initial method for inoculation ofthe

J. CLIN. MICROBIOL.

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(6)

identification

cartridge by

a

pipette-syringe

as-sembly carried

some

risk of aerosol

formation,

contamination of the

tape

covering

the

cham-bers, and

skin

puncture from the

hypodermic

needle. These

disadvantages

were

corrected

by

modifications

to

the

dispenser

system.

These

were:

(i) machine

perforation

of

the tape

sealing

the chambers

of the

cartridge,

and

(ii) dispensing

the

inoculum

with an

automatic

pipette

with

blunt

sterile

disposable tips.

These modifications

also

eliminated the need

for a

disposable

syringe

with

each

organism tested. The retail

price

for

each

disposable

cartridge

is

$2.10,

which is

sim-ilar

to that of

cartridges

used in commercial

manual methods for

identifying

Enterobacteri-aceae.

The

availability of bacterial identification

within

5h

of

primary isolation

has

considerable

value

as a

guide

to antimicrobial

therapy.

In

addition

to a

high

degree

of

physician

accept-ance,

rapid

identification

can

benefit the

clinical

laboratory

by

eliminating

the need for

prepara-tion

and

distribution of

preliminary

reports.

The

advantages

appearto

be

greatestto

both

physi-cians and

laboratories when

rapid

identification

is

accompanied

by

antimicrobial

susceptibility

tests

also

performed

in 3 to 5

h.

At

least

two

systems,

MS-2 and

AutoBac I

(Pfizer

Diagnos-tics,

New

York),

can

perform

susceptibility

stud-ies within this

period

of time.

Entry

of results

into

data

processing

systems is

also

simplified

if

bacterial identification and

susceptibilities

are

available

at

the

same

time

rather than

a

day

apart.

ACKNOWLEDGMENTS

The technical expertise of Gene Marso (UCLA) and the secretarialskills of LauraCarroll (Baylor) are gratefully ac-knowledged.

Thisstudy was supported by a grant from the Abbott Corp.

LITERATURE CMD

1. Aldridge, K. E., B. B. Gardner, S. J. Clark, and J. M. Matsen.1978.Comparison of micro-ID, API 20E and conventional mediasystems inidentification of Enter-obacteriaceae. J. Clin. Microbiol. 7:507-513. 2. Buesching, W. J., D. L. Rhoden, A.O. Esaias, P. B.

Smith,and J. A.Washington Il. 1979. Evaluation of themodified micro-IDsystem for identification of En-terobacteriaceae. J. Clin. Microbiol. 10:454-458.

3. Darland, G., W. H. Ewing, and B. R. Davis. 1972. The biochemical characteristics ofYersiniaenterocolitica and Yersiniapseudotuberculosis. Center for Disease Control, Atlanta, Ga.

4. Edwards, P. R., and W. H. Ewing. 1972. Identification ofEnterobacteriaceae, 3rd ed.Burgess Publishing Co., Minneapolis, Minn.

5. Ewing, W. H. 1973.Differentiation of Enterobacteria-ceaeby biochemicalreactions.Center for Disease Con-trol, Atlanta, Ga.

6. Ewing, W. H., and B. R. Davis. 1970. Media and tests fordifferentiation of Enterobacteriaceae. U.S. Depart-mentof Health, Education and Welfare, National Com-municable Disease Center, Atlanta, Ga.

7.Nord, C. E., A. A. Lindberg, and A. Dahlback. 1974. Evaluation of fivetest-kits-API, AuxoTab, tube, PathoTec and R-B for identification of Entero-bacteriaceae. Med. Microbiol. Immunol.159:211-220. 8. Skerman, V. B. D.,V.McGowan, and P. H. A. Sneath

(ed.). 1980. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30:225-420.

9. Smith,P. B.1975.Performance of six bacterial identifi-cation systems. Center for Disease Control, Atlanta, Ga. 10. Smith, P. B., K. M. Tomfohrde, D. L. Rhoden, and A. Balows. 1972.APIsystem: amultitube micromethod foridentification of Enterobacteriaceae. Appl. Micro-biol. 24:449-452.

VOL.12,

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