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Origin and impact of initialisation shocks 

in coupled atmosphere­ocean forecasts 

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Open Access 

Mulholland, D., Laloyaux, P., Haines, K. and Balmaseda, M. A. 

(2015) Origin and impact of initialisation shocks in coupled 

atmosphere­ocean forecasts. Monthly Weather Review, 143 

(11). pp. 4631­4644. ISSN 0027­0644 doi: 

https://doi.org/10.1175/MWR­D­15­0076.1 Available at 

http://centaur.reading.ac.uk/40638/ 

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Origin and Impact of Initialization Shocks in Coupled Atmosphere–Ocean

Forecasts*

DAVIDP. MULHOLLAND

Department of Meteorology, University of Reading, Reading, United Kingdom

PATRICKLALOYAUX

European Centre for Medium-Range Weather Forecasts, Reading, United Kingdom

KEITHHAINES

Department of Meteorology, and National Centre for Earth Observation, University of Reading, Reading, United Kingdom

MAGDALENAALONSOBALMASEDA

European Centre for Medium-Range Weather Forecasts, Reading, United Kingdom (Manuscript received 27 February 2015, in final form 15 June 2015)

ABSTRACT

Current methods for initializing coupled atmosphere–ocean forecasts often rely on the use of separate atmosphere and ocean analyses, the combination of which can leave the coupled system imbalanced at the beginning of the forecast, potentially accelerating the development of errors. Using a series of experiments with the European Centre for Medium-Range Weather Forecasts coupled system, the magnitude and extent of these so-called initialization shocks is quantified, and their impact on forecast skill measured. It is found that forecasts initialized by separate oceanic and atmospheric analyses do exhibit initialization shocks in lower atmospheric temperature, when compared to forecasts initialized using a coupled data assimilation method. These shocks result in as much as a doubling of root-mean-square error on the first day of the forecast in some regions, and in increases that are sustained for the duration of the 10-day forecasts performed here. However, the impacts of this choice of initialization on forecast skill, assessed using independent datasets, were found to be negligible, at least over the limited period studied. Larger initialization shocks are found to follow a change in either the atmosphere or ocean model component between the analysis and forecast phases: changes in the ocean component can lead to sea surface temperature shocks of more than 0.5 K in some equatorial regions during the first day of the forecast. Implications for the development of coupled forecast systems, particularly with respect to coupled data assimilation methods, are discussed.

1. Introduction

The use of a coupled atmosphere–ocean model, in preference to an atmosphere-only modeling approach, is essential in order to achieve skillful forecasts of climate on the seasonal time scale and beyond, and is increasingly being recognized to provide benefits at shorter forecast lead times, too (e.g.,Fu et al. 2007;Klingaman et al. 2008;

Vitart et al. 2008;Janssen et al. 2013;Shelly et al. 2014). A major challenge of the coupled forecasting approach lies in the initialization, the goal of which is to incorporate

* Supplemental information related to this paper is avail-able at the Journals Online website:http://dx.doi.org/10.1175/ MWR-D-15-0076.s1.

Corresponding author address: David Mulholland, Department of Meteorology, University of Reading, Earley Gate, P.O. Box 243, Reading RG6 6BB, United Kingdom.

E-mail: [email protected] Denotes Open Access content.

DOI: 10.1175/MWR-D-15-0076.1 Ó 2015 American Meteorological Society

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information from the observational network in both at-mosphere and ocean into the corresponding model com-ponents in an optimal manner. This is commonly achieved through data assimilation (DA), performed using one of a number of established methods for each model compo-nent (e.g.,Daley 1993;Anderson et al. 1996).

The data assimilation strategy used by operational centers in recent years to initialize coupled forecasts (e.g.,

Saha et al. 2006;Molteni et al. 2011;Arribas et al. 2011;

MacLachlan et al. 2015) is to perform separate analyses of the atmosphere and ocean. A sea surface temperature (SST) product is used to prescribe the boundary condition of the atmospheric model, and the ocean model is con-strained by either near-surface atmospheric fields or explicitly specified surface heat, momentum, and freshwater fluxes, typically obtained from an atmo-spheric analysis or from a gridded observational product. One-directional coupling during the initiali-zation may be achieved with this approach, by using the result of the atmospheric analysis to provide the boundary condition for the ocean model (e.g.,Balmaseda et al. 2013). However, the use of different models for the analysis and forecast phases can further compli-cate matters, particularly when producing historical hindcasts (reforecasts) for calibration purposes using past initial conditions computed with previous model code versions. In this context, obtaining truly balanced initial conditions requires allowing for some degree of atmosphere–ocean coupling to occur during the ana-lyses themselves, as well as the use of the same coupled model in the analysis and forecast phases.

Various possible coupled data assimilation systems exist, exhibiting varying strengths of coupling between the atmosphere and ocean. Several operational centers are pursuing such methods (Saha et al. 2010;Lea et al. 2015;Alves et al. 2014), including the European Centre for Medium-Range Weather Forecasts (ECMWF), which has developed a prototype for a coupled assimila-tion system that ingests simultaneously atmospheric and ocean observations (Laloyaux et al. 2015). In this system, information is allowed to cross the interface through the multiple integrations of the coupled model performed during the assimilation process, ensuring that a consistent atmosphere–ocean analysis is produced (in the sense that each of the two model components have knowledge about the boundary fluxes of the other component, and have been able to establish a balance with one another in this context). Forecasts can be initialized from the output of this coupled analysis. However, ECMWF operational coupled forecasts currently continue to use the uncoupled analysis method for initialization.

In choosing an initialization method, particularly for relatively short-range coupled forecasts, it is important to

ensure that the two model components are consistent with one another at the commencement of the forecast, in order to avoid the generation of ‘‘initialization shocks’’ (alter-natively, coupling shocks or spinup effects) (Rahmstorf 1995; Zhang et al. 2007;Balmaseda et al. 2009; Zhang 2011). The likely existence of initialization shocks in the coupled model context has been acknowledged, particu-larly in a seasonal forecasting context (Balmaseda and Anderson 2009; Marshall et al. 2011), but neither their formation nor impact in short-range forecasts using a full atmosphere–ocean global climate model has been ex-plored in detail, to our knowledge. A particular problem lies in separating out signals of initialization shock—that is, those that result purely from an imperfect initialization method—and those of model drift, which occurs regardless of the initialization method used, due to the existence of biases, physical or dynamical, in the model (e.g.,

Magnusson et al. 2013;Wang et al. 2014). Measuring the magnitude of initialization shock and investigating its causes are important steps in maximizing the effectiveness of coupled forecasts and in pointing the way toward pos-sible improvements to conventional methods.

Here we define initialization shock relatively broadly, to encompass several possible causes, each of which we are able to isolate using the experiments that follow:

1) An imbalance, in the vertical fluxes of any of heat, momentum, or freshwater, between the atmosphere and ocean initial states, formed due to insufficient communication between the two model components during the calculation of the initial conditions. This situation can arise if model components are coupled to forcing fields other than those of the coupled system during initialization, such that the near-surface regions of each component are compatible with the relevant forcing fields but will not, in general, be compatible with each other. As a result, when the two components are combined at the beginning of the forecast, rapid changes in surface fluxes are expected, as the two components exchange heat, momentum, and/or freshwater in order to establish a new thermodynamical balance. This rapid adjustment could have an undesirable impact on the forecast.

2) The use of different models, or different versions or configurations of the same model, to provide the initial state (for either component) and to compute the forecast. A common example of this is the use of a popular reanalysis such as ERA-Interim (Dee et al. 2011) to directly initialize an atmospheric model different to the one used to generate the reanalysis (the reanalysis may then be described as ‘‘nonnative’’ with respect to the forecast model). The

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result could be an initial state that is incompatible with new model’s attractor, resulting in an adjust-ment at the beginning of the forecast.

3) The instantaneous removal of bias correction terms in one of the model components, resulting in an abrupt change in the dynamics of the component at the beginning of the forecast, even in the absence of any model drift (this effect is explained in more detail insection 3d).

This initialization shock definition is not intended to be a complete list of the contributors to spinup effects in a model forecast: development of forecast errors due to model biases, in what would be considered ‘‘stan-dard’’ model drift, is not included, since this process is unavoidable even with a balanced initialization using the same models as the forecast itself. Further, model adjustments occurring as a result of the more general problem of assimilating observational information in the initial conditions but not in the forecast itself, are not explicitly considered, as these are also present in all of the forecast systems used in this work. The shocks that are discussed here are those deviations of the forecast from the truth that can demonstrably be reduced or eliminated through changes to the zation procedure. Also, we note that a similar initiali-zation problem exists for the coupling of atmosphere and land surface model components, but do not con-sider this here: we focus solely on atmosphere–ocean coupling.

In this paper, we use the ECMWF analysis and fore-cast system, in various configurations, to detect the oc-currence of initialization shocks in coupled forecasts; to quantify the contributions to these shocks of each of the mechanisms listed above; and to evaluate the impact of shock on coupled forecasts. By using forecasts initial-ized using coupled DA as a control, it is possible to isolate those deviations from a reference state that may be described as initialization shocks, as a subset of the total model drift, which occurs also via the de-velopment of systematic model biases. We attempt to

establish if effects can be reduced through changes to the initialization method, and investigate the extent to which the presence of initialization shocks might af-fect forecast skill.

The structure of the paper is as follows. The models and initialization techniques used in the paper are in-troduced, and the experiments performed are defined, in

section 2. The results of these experiments, including identification of initialization shocks and evaluation of forecast skill, are presented insection 3. Implications for operational coupled forecasting are discussed insection 4, and the key findings of the paper are summarized in

section 5.

2. Methods

a. Models and experiments

The coupled DA system recently developed at ECMWF, called the Coupled ECMWF Reanalysis sys-tem (CERA), is presented and described in detail in

Laloyaux et al. (2015). The CERA system is based on an incremental variational approach in which the misfits with ocean and atmospheric observations are computed by the ECMWF coupled model. Both atmospheric and subsurface ocean observations are assimilated within a common 24-h assimilation window, leading to the computation of a coupled atmosphere–ocean analysis. The CERA system uses recent versions of the In-tegrated Forecast System (IFS), at a spectral resolution of T159 with 137 vertical levels, for the atmosphere, and the Nucleus for European Modeling of the Ocean (NEMO) model, in the ORCA1 configuration (corre-sponding to a horizontal resolution of around 18 in midlatitudes and 1/38 at the equator, with 42 vertical

levels) for the ocean (seeTable 1for details of CERA and the other analyses used in this paper).

For the purposes of understanding this paper, addi-tional important points to note regarding the CERA system are that SST is nudged toward a gridded obser-vational product during the coupled model integrations,

TABLE1. Details of the various analyses (atmosphere, ocean, or coupled) that are used for forecast initialization and as reference fields for forecast evaluation in this paper. The gridded SST product used is either the Operational Sea Surface Temperature and Sea Ice Analysis (OSTIA;Stark et al. 2007) or one of two National Centers for Environmental Prediction (NCEP) products (Reynolds et al. 2002;

Gemmill et al. 2007), depending on the time period (during 2008–10) in question. The name CERA is used to denote both its atmosphere and ocean components.

Name Atmosphere/ocean Model version Resolution SST treatment CERA Atmosphere and ocean 40r1 and 3.4 T159L137 and ORCA1 OSTIA/NCEP (nudged) U_atmos Atmosphere 40r1 T159L137 OSTIA/NCEP (prescribed) ERA-Interim Atmosphere 31r2 T255L60 OSTIA/NCEP (prescribed) U_ocean Ocean 3.4 ORCA1 OSTIA/NCEP (nudged) ORAS4 Ocean 3.0 ORCA1 OSTIA/NCEP (nudged) ORAS4_nobiascrtn Ocean 3.0 ORCA1 OSTIA/NCEP (nudged)

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rather than being explicitly assimilated, and that bias correction (seesection 3d) is not used in the ocean. The initialization method used in CERA is presented di-agrammatically in Fig. 1, along with the other ap-proaches to ocean–atmosphere data assimilation that are relevant to this paper. It is intended that the degree of coupling present in the CERA method is sufficient to ensure a consistent initial ocean–atmosphere state, and thus (along with a consistency of models between anal-ysis and forecast) avoid initialization shocks of the types listed in the previous section.

Using CERA, coupled reanalyses were performed covering three 2-month test periods (to provide some coverage of the seasonal cycle): April–May 2008, De-cember 2008–January 2009, and August–September 2010. The 10-day forecasts were initiated at 5-day in-tervals during these periods, at 0000 UTC, using the CERA analysis to provide the initial conditions in both the atmosphere and the ocean. This set of 30 forecasts is named C1 (for ‘‘coupled’’; seeTable 2). These forecasts were run with the same model configuration (versions and resolutions) as used in CERA. While the three pe-riods used cover a somewhat limited range (less than three years) of the possible background states of the climate system, the consistency of results (shown in the next section) across the three periods gives confidence that our forecast sets are adequate for determining the relative importance of each of the sources of shock.

Uncoupled analyses were also performed during these periods. The atmospheric analysis (which is referred to as U_atmos) used the observed SST products as the lower boundary condition, and this analysis was then used as the upper boundary condition during the ocean analysis (referred to as U_ocean), with heat, freshwater, and momentum fluxes from U_atmos applied as daily averages [in the same manner as described inBalmaseda

et al. (2013)]. The same subsurface observations were assimilated, and the same SST nudging scheme was used, as in CERA. A set of forecasts, U1 (for ‘‘un-coupled’’), with the same resolution as C1, was run using initial conditions obtained from these analyses. We refer to this set as uncoupled, though in fact a degree of one-directional coupling does exist in the initialization, through the use of the completed atmospheric analysis during the ocean analysis. Note, also, that the name U1 refers to the uncoupled nature of the analyses only: all forecasts performed here use a coupled system. Com-parison of U1 to C1 will reveal the impact on forecasts of the use of coupled DA in creating the initial conditions. With respect to the other experiments detailed sub-sequently, the key feature of U1 is the use of the same operational ocean and atmosphere models in analyses and forecasts.

A third set of forecasts, M1 (for ‘‘model change’’), was performed, using the same coupled forecast model ver-sions as used by C1 and U1. In this set, atmosphere and ocean components were initialized using uncoupled re-analyses, namely ERA-Interim (Dee et al. 2011) for the atmosphere, and the Ocean Reanalysis System 4 (ORAS4;Balmaseda et al. 2013) for the ocean. These reanalyses were performed with the atmospheric and ocean components of the ECMWF coupled forecasting system model, respectively (again using a gridded SST product as atmospheric boundary conditions and for ocean SST nudging), but in both cases older, deprecated model versions were used (seeTable 1), creating an in-consistency between the analyses and forecasts. In the case of the atmosphere, the resolution between analysis and forecast also differed: ERA-Interim used a resolu-tion of T255 L60, whereas the M1 forecasts were run at T159 L91. In the ocean, analysis and forecast resolutions were the same (ORCA1, 42 vertical levels, as previously).

FIG. 1. The initialization (analysis) methods used for forecast sets (left) C1, (middle) U1, and (right) M1. Color coding indicates differences in model version, and elements of the analyses that are not used in forecast initialization are marked with a diagonal line. (Forecast model components IFS, WAM, and NEMO are the atmosphere, wave, and ocean components, respectively).

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In M1, as in U1, there is some degree of coupling in the initialization, as ORAS4 was forced by ERA-Interim fluxes during the assimilation.

This method, involving older model versions (and possibly lower resolutions) in the creation of initial conditions, is commonly used for the production of historical hindcasts that are needed for the calibration of operational seasonal forecasts (e.g.,Arribas et al. 2011), and changes in model version from analysis to forecast may also be a feature of the operational seasonal fore-casts themselves (Molteni et al. 2011).

Details of all the forecast types are summarized in

Table 2. Note that in each case, the initial SST values used are taken from the ocean component of the anal-ysis, rather than the atmospheric component (Fig. 1). In short, the comparison between U1 and C1 is designed to reveal the shock that occurs (in U1) due to atmosphere– ocean imbalance in the initial conditions, while the comparison between M1 and U1 is aimed at in-vestigating the sensitivity of forecasts to the choice of uncoupled (re)analysis products used for initialization (i.e., how this choice of initialization product can gen-erate shocks of the second and third ‘‘types,’’ as listed in the previous section). It is expected that any shocks will be detectable within the 10-day range of the forecasts.

Two further sets of forecasts are added later (see

section 3d, and Table 2), to distinguish between the second and third sources of shock. Additionally, several 7-month forecasts are performed (see section 4), to briefly examine the potential for initialization shocks to impact the forecast on monthly time scales.

b. Forecast evaluation methods

In the results that follow, two common metrics—root-mean-square error (RMSE) and anomaly correlation coefficient (ACC)—are used to measure forecast bias and skill, respectively. RMSE is sensitive to mean drift so is used to detect shocks and identify absolute-value differences between forecast types. The centered version

of ACC, as used here, is insensitive to mean drift (forecast and reference anomalies are calculated with respect to their individual climatologies) so it is used to measure forecast skill. For each forecast type, RMSE is calculated with respect to the analysis that was used to initialize that forecast (specifically, CERA for C1, U_atmos and U_ocean for U1, and ERA-Interim and ORAS4 for M1). ACC is calculated for daily mean precipitation, and all forecasts are evaluated against an independent observational dataset (i.e., one not assim-ilated during any of the analyses), from the Global Precipitation Climatology Project (GPCP; a daily-mean dataset at 18 spatial resolution;Huffman et al. 2012), so as to avoid biasing the calculation toward one of forecast types, as would be the case if a particular analysis were used. In the calculation of ACC, forecast and observa-tion ensemble means (averaged over the 30 start dates, at consistent lead times) are used as the climatologies (with respect to which anomalies are computed), since no longer record is available for the forecasts.

In several of the figures shown, confidence intervals, with respect to forecast biases or skill being significantly different from the corresponding values in C1, which is taken as a baseline case, are used. These are calculated using a nonparametric bootstrapping approach to ac-count for the finite sample size (followingGoddard et al. 2013;Smith et al. 2013) (details of the procedure are given in the online supplemental material).

3. Results

a. Shock in the lower atmosphere

In U1 and M1, the one-way coupling during the as-similation phase is such that continuity from analysis to forecast is provided in the ocean—by virtue of its forcing by the same atmospheric analysis used to provide the initial atmospheric state—but not in the atmosphere. The change in SST forcing experienced by the atmo-sphere at the beginning of the forecast is the switch

TABLE2. Description of forecast sets described in the text. All forecasts use the same operational coupled ocean–atmosphere model system (model versions 40r1 and 3.4 for IFS and NEMO, respectively), but types differ in the model versions and settings used for their initialization (refer toTable 1). The sources of shock considered are the three listed insection 1.

Name Details Resolution Atmosphere IC Ocean IC Sources of shock C1 Coupled DA T159L137/ORCA1 CERA CERA Baseline

U1 Uncoupled analyses, consistent models

T159L137/ORCA1 U_atmos U_ocean Surface imbalance M1 Uncoupled analyses,

change in models

T159L91/ORCA1 ERA-Interim ORAS4 Surface imbalance, model version change, bias correction removal M2 Uncoupled analyses,

change in models

T159L91/ORCA1 ERA-Interim ORAS4_nobiascrtn Surface imbalance, model version change

M3 Uncoupled analyses, change in atm. model

T159L91/ORCA1 ERA-Interim U_ocean Surface imbalance, model version change, bias correction removal

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from a gridded, observed product to the ocean analysis field, which itself was produced using nudging of SST toward the same observed product (Fig. 1). Therefore, the shock in the near-surface atmosphere can be ex-pected to be a function of the accuracy with which the ocean analysis U_ocean reproduces the SST field toward which it has been nudged.

Figure 2a shows the root-mean-square difference (RMSD) between the SST seen by the atmosphere during analysis (i.e., the gridded observed products) and the SST produced by the ocean analysis U_ocean as initial conditions for the U1 forecasts. Discrepancies are largest in regions of large SST temporal variability, near the Northern Hemisphere western boundary currents, in the eastern tropical Pacific (particularly during August– September 2010, when tropical instability waves are most active) and in the Antarctic Circumpolar Current. These are also areas in which model biases, which the assimilation attempts to correct, are large. It is these areas in which shocks due to component imbalance may be expected.

Figure 3shows the RMSE, after 12 h, of forecast air temperature at 1000 hPa, for C1 (cf. CERA), U1 (cf. U_atmos), and M1 (cf. ERA-Interim), averaged over all

forecast start dates. Widespread errors are present in C1 (Fig. 3a), forming because of the presence of biases in the models and to any imperfections in the coupled analysis initialization method. These errors do not con-stitute the initialization shock that is being investigated here, according to our earlier definition. Therefore, C1 is taken as a baseline case, such that any further deviation of a forecast from its reference analysis should repre-sent a shock imparted by an initialization procedure that differs from that of C1.

FIG. 2. (a) Root-mean-square difference between U_ocean SST and the SST used as forcing by U_atmos, at the beginning of the forecasts, showing the imbalance present in the initialization of forecasts U1. (b) As in (a), but for ORAS4 and ERA-Interim, showing one of the sources of imbalance in the initialization of forecasts M1.

FIG. 3. 1000-hPa temperature forecast RMSE, relative to the analysis used as the initial conditions, for (a) C1, (b) U1, and (c) M1, at 12-h lead time. Land areas are masked out, as the focus is on atmosphere–ocean imbalance. Contours in (b) and (c) show differences in RMSE relative to C1, with blue (green) contours marking increased (decreased) RMSE in U1 and M1. Contours are drawn at differences of 0.158C in (b), and at differences of 0.58C in (c). Only differences that are significant at the 90% level, estimated using the bootstrapping method, are contoured.

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Relative to C1, U1 (Fig. 3b) shows, over the ocean, small but significant increases in RMSE in several areas, which are generally those areas in which the RMSE between the two SST fields, as shown in Fig. 2a, is largest. This air temperature shock signal in U1, there-fore, appears to develop primarily due to the change in SST forcing felt by the atmosphere after the transition from the analysis to the forecast phase. Correlations between the initial SST discrepancy and the 12-h air temperature error in U1 minus that in C1, calculated across the 30-date forecast set, are significant in the same areas of strong SST variability (see Fig. S1a in the online supplemental material), confirming that the develop-ment of air temperature biases in excess of those found in C1, can be attributed to the imbalance between at-mosphere and ocean at the beginning of the U1 fore-casts. These air temperature shocks are generally of magnitude 0.2 K or less, but compared to the small baseline RMSE seen in most areas in C1 (Fig. 3a), they represent substantial error amplifications: RMSE is in-creased by 50% or more in the eastern equatorial Pa-cific, eastern tropical Atlantic, northern PaPa-cific, and across most of the Southern Ocean, and it is more than doubled in the Gulf Stream and Arctic regions.

The difference between ORAS4 SST and the gridded products used by ERA-Interim (Fig. 2b) shows a similar spatial pattern to the differences between the opera-tional analyses, but with slightly larger values (by an average of; 15%) in most areas, indicating a greater imbalance and larger discontinuity felt by the atmo-sphere at the beginning of a forecast. These increases in RMSD are partly the result of small differences between the SST products used by ERA-Interim and ORAS4 during two of the three periods covered by these ex-periments. However, the 1000-hPa air temperature shock in M1 (Fig. 3c) is rather different to that in U1: RMSE is increased relative to C1 over most of the ocean, in contrast to the limited areas of amplification seen in U1. Correlations between initial SST discrep-ancy and 12-h air temperature shock are again signifi-cant in some regions (see Fig. S1b in the online supplemental material), but are uniformly weaker than those of U1, suggesting the existence of another source of air temperature shock in M1. Also, there is little sig-nificant correlation to explain the shocks in parts of the North Pacific, the Southern Ocean near Antarctica, and in the Arctic, in which regions (along with most of the globe) the bias is increased several times over its base-line (C1) values.

The additional source of atmospheric initialization shock in M1 is the change in both atmosphere and ocean model versions that occurs between analysis and fore-cast, combined with the change in atmospheric vertical

resolution. The change in atmospheric model is likely to be the more important with respect to shock in the at-mosphere, though the change of ocean model could also contribute (as explored further in section 3b). Model differences lead to a shock that increases errors above those of C1, over most of the planet, by the end of the first day.

Figure 4 compares the RMSE in air temperature throughout the atmospheric column after 24 h in the forecast types C1, U1, and M1, each evaluated against the analysis used for their initialization, averaged over the Niño-3 region (58N–58S, 1508–908W). In agreement with the interpretation of the U1 near-surface temper-ature shock as arising from the initial atmosphere–ocean imbalance, statistically significant differences in RMSE between U1 and C1 are limited to the lower atmosphere (at and below ;850 hPa). In M1, however, RMSE is amplified compared to C1 at all pressure levels, implying the occurrence of a shock that is spread throughout the atmosphere. This effect might very well arise from the difference in vertical resolution that exists between analysis and forecast (60 and 91 vertical levels, re-spectively), together with differences in physics between the two model versions. Note that the errors at this point in the forecast are generally at least as large as differ-ences between the three analyses.

So, although atmospheric initialization shocks do oc-cur as a result of imbalanced initial conditions (i.e., shocks of the first ‘‘type’’ as listed insection 1), the ev-idence here suggests that these are smaller than the

FIG. 4. Air temperature RMSE profiles averaged over the Niño-3 region (58N–58S, 1508–908W), for C1 (blue), U1 (orange), and M1 (black), evaluated against CERA, U_atmos, and ERA-Interim, respectively, and RMSD profiles between CERA and the other two analyses (gray dashed and gray dotted). Filled (open) squares mark output pressure levels where the RMSE difference between U1 or M1 and C1 is significant (not significant) at the 90% level, estimated using the bootstrapping method.

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adjustments that occur following a change in the atmo-spheric model (shocks of the second type). In the pres-ent case the change is merely from an older to a newer version of the same model, and a larger effect can be anticipated if initial conditions are obtained from a structurally different model altogether.

Figure 5shows the evolution of the air temperature forecast error at 1000 hPa for C1, U1, and M1 against their own analyses, averaged over the Niño-3 region. The larger error growth in U1 compared to C1 results from the SST discrepancies shown inFig. 2aduring the first day, and the effects of the shock are felt out to at least 10 days’ lead time, through a;5%–10% increase in RMSE, showing that initialization shocks have the potential to impact medium-range (as well as short-range) forecasts. In M1, the effect of the difference in vertical resolution between the forecast and the refer-ence analysis can be seen at lead time t5 0, and RMSE rises sharply on day 1 of the forecast, indicating a strong shock following the change in model version/resolution. Part of the difference between M1 and U1 may be at-tributable to the lower vertical resolution of M1 (the number of vertical levels in the lowest;1 km is reduced by around one-third compared to U1).

b. Shock in the upper ocean

In the upper ocean, markedly different bias develop-ment is seen in M1 compared to the other two forecast types, particularly near the equator.Figure 6plots the

time series in SST averaged in the Niño-3 region, for the three forecast types and their corresponding analyses, in the period December 2008–January 2009 only. In M1, a large shock occurs at the beginning of the forecast, and a cold bias of around 0.5 K has formed after 6 h, the first output point in the forecast series. A shock of around this size forms consistently (620%) in each of the 10 forecasts in this period, and the identification of this error is clearly not sensitive to the reference SST used. The other two periods (shown in Fig. S2 in the online supplemental material) feature similar cold shocks, but with different magnitudes. The shock is, therefore, a robust effect, but shows some seasonal variation, due to seasonal variation in the difference between the clima-tological states of the analysis and forecast versions of the ocean model. After the initial shock, a correction is seen to occur; nevertheless, by day 10, the M1 error is still significantly larger than errors in the other forecasts. In this case, the initialization shock has increased the forecast error, though in general the shock need not be of the same sign as the forecast drift (see e.g., Fig. S2a in the online supplemental material). A similar shock, though with smaller magnitude, is seen in the eastern equatorial Atlantic (see Fig. S3 in the online supple-mental material).

The source of this drift is dynamical differences be-tween the two ocean model versions (as used in ORAS4 and M1, respectively; seeTables 1and2), combined with differences in ocean analysis methodology. Upper-ocean

FIG. 5. 1000-hPa temperature forecast RMSE averaged over the Niño-3 region for C1 (blue), U1 (orange), and M1 (black) each evaluated against their own corresponding analysis, as labeled. RMSD between CERA and the other two analyses are shown for comparison (gray dashed and gray dotted). Squares mark where points in the U1 and M1 series are different from C1 at the 90% significance level, using confidence intervals calculated via the bootstrapping method.

FIG. 6. SST forecast and analyses time series for the 10 start dates in December 2008–January 2009, averaged over the Niño-3 region. Forecast series are plotted at 0, 6, 12, 18, and 24 h, and every 12 h thereafter; analysis series for CERA and U_ocean are plotted at the same frequency (U_ocean features a very weak diurnal cycle), but only daily means are plotted for ORAS4 (which also has a very weak diurnal cycle, not shown). Across the 10 start dates, the magnitude of the drop from 0 to 6 h in the M1 series ranges from 0.448 to 0.628C.

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vertical profiles in the Niño-3 region, plotted in Fig. 7, show that the ORAS4 analysis (run with NEMO v3.0) features stronger (by up to 50%) upwelling velocities than CERA and U_ocean at 50-m depth and below. All three analyses are nudged to the same (or a very similar) SST field (analyzed Niño-3 SSTs show a spread of ;0.2 K), and the zonal wind forcings supplied to the ocean analyses (from CERA, U_atmos, and ERA-Interim) are very similar (not shown), so differences in upwelling must be due to ocean model differences be-tween the two versions used to perform the analyses, and differences in the treatment of model bias during the analysis (examined further insection 3d). The shock that occurs in Niño-3 in the M1 forecasts does so as a result of the use of the ORAS4 equatorial ocean state as initial conditions in the newer version of NEMO, which normally (in U_ocean, with no bias correction) produces realistic near-surface temperatures with much weaker upwelling. The stronger vertical veloc-ities, as well as colder waters at 50–150 m, while not necessarily less realistic than U_ocean, cause the rapid surface cooling due to their incompatibility with the forecast model. The partial recovery of Niño-3 SST in

Fig. 6can be interpreted as the equatorial ocean cir-culation adjusting (weakening) through the use of the newer model version. Differences between the ana-lyses vary seasonally, correlated with the size of the SST shock in M1 in the three forecast periods. A similar explanation can be found for the (weaker) shock that occurs in the eastern equatorial Atlantic.

Returning toFig. 6, it is seen that the drift in C1, which can again be taken as a baseline case, is small in Niño-3 in this season, though more substantive drifts do occur in other seasons (see Fig. S2 in the online supplemental material). In U1, a cold bias can be seen to form at the beginning of the forecast. However, the source of this bias is not the same as that of the M1 shock. The source is the weak diurnal variation present in SST in the U_ocean analysis, as a result of the use of daily mean fluxes in its production. Since forecasts are initialized at 0000 UTC, a longitude-dependent bias forms once the coupled fore-cast model generates a larger diurnal SST signal. In the eastern Pacific, the initial SST value, which is essentially a daily-mean value, is too cold given the local time of day (seen by comparing the C1 and U1 lines at t5 0), so, as the region cools in the evening, a bias develops relative to U_ocean. The opposite effect occurs in the Indian Ocean (see Fig. S3b in the online supplemental material). C1, on the other hand, does not show this drift, as the CERA ocean analysis includes some diurnal SST variation by virtue of its frequent coupling to the atmosphere during the analysis. The time-of-day effect might be considered to be a legitimate form of shock (in line with the definition

given in section 1), stemming from a lack of coupling during the ocean analysis. However, in principle it is possible to obtain a stronger SST diurnal cycle from an uncoupled ocean analysis by forcing using a higher-frequency atmospheric flux product.

Errors introduced due to this effect are of order 0.1 K, and appear to account for most of the U1 drift in this region, which is, otherwise, not much different to that of C1, implying a limited impact of imbalance-driven shock on SST. Nevertheless, correlations between the SST and air temperature shocks do suggest that part of the U1 SST drift in the eastern Pacific arises due to a compen-satory ocean cooling in response to the overlying at-mospheric cold shock (Fig. 3b).

FIG. 7. Niño-3 ocean (a) temperature and (b) upwelling velocity profiles from the ocean analyses U_ocean (orange) and ORAS4 (black), relative to CERA, constructed using monthly means for the 6 months in 2008–10 during which forecasts were performed. Shading shows61 standard deviation of the 6-month ensemble. Upwelling velocity profiles for each of the three forecast periods are also shown explicitly for ORAS4 (dotted: April–May 2008; dashed: December 2008–January 2009; dash–dotted: August– September 2010).

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c. Impact on forecast skill

Having established that initialization shocks do occur in the upper ocean and in the atmosphere in the fore-casts initialized using uncoupled data assimilation, we now investigate whether or not these shocks have any detrimental impact on the forecast skill, using daily av-erage precipitation rates evaluated against GPCP ob-served rates. The use of an independent reference dataset such as this is the only way to meaningfully compare forecast skill among the different experiments, since each was initialized using a different analysis.

Figure 8 shows that, in both the tropics and extra-tropics, differences in forecast skill between C1 and U1, which should form solely due to the effects of shock due to initial imbalance, are very small and generally not significant, implying that the impact on forecast skill of this type of initialization shock is, using this broad measure, slight. Although, where differences in these wide regional averages do briefly reach 90% significance (on two occasions in the northern extratropics) they do so with larger skill scores in C1 than in U1. A similar evaluation of skill in 1000-hPa temperature, measured against an independent reanalysis, also resulted in neg-ligible differences between C1 and U1 (not shown). A much larger forecast set may be necessary to assess confidently the penalty in skill arising from imbalance-driven shock, since it appears to be a very small one, as far as can be determined from this set.

The precipitation forecast skill of the M1 forecasts (not shown) is consistently lower, by;0.03, than C1 and U1. While this could suggest a sustained impact fol-lowing the initialization shock due to the change in model version, it is perhaps more likely to be a symptom of the slightly lower vertical resolution used in M1, and of the less accurate initial atmospheric state provided by ERA-Interim compared to the initial states used in C1 and U1.

d. Sensitivity to ocean initial conditions

Although dynamical differences between the two ocean model versions were seen earlier to explain at least partly the SST shock in M1, there is another dif-ference between the ocean initialization methods of M1 and U1—the use of bias correction during the analysis in M1, and not in U1. Bias correction during the assimila-tion attempts to prevent the rapid destrucassimila-tion of in-crements by a biased model, and has an impact on ocean velocities, particularly close to the equator, where model biases tend to be large due to uncertain wind stress forcing of the upper ocean (Bell et al. 2004;Balmaseda et al. 2007). The use of bias correction leads ultimately to a different ocean initial state, in the same way as does

the use of a different model during analysis. To clarify the reasons for upper ocean shock in M1, a further two sets of forecasts, M2 and M3, were run. Both used ERA-Interim as the atmospheric initial conditions, like M1, and both used the same resolutions as M1, but with different initializations for the ocean.

Forecasts M2 used as initial conditions a different ocean analysis, one identical to ORAS4 but run without bias correction (ORAS4_nobiascrtn; see Balmaseda et al. 2013). Because of a limited number of available restart files for this analysis, a smaller set of six forecast start dates were run in April–May 2008 and December 2008–January 2009, and no forecasts were possible in August–September 2010, so August–September 2008 was used instead. For all start dates used for M2, cor-responding M1 forecasts were also run, enabling an ac-curate comparison between these two forecast types, to isolate the roles of changing model version and the use of bias correction, in initialization shocks originating in the ocean. Then, to complete the attribution of shocks to the three sources identified in the introduction, a set of forecasts M3 was run (for the same 30 start dates as in M1) using the new uncoupled ocean analysis (U_ocean) as the ocean initial conditions. The results of M2 should isolate the contribution to the shock in the ocean of the removal of bias correction at the beginning of the fore-cast, as distinct from the contribution from a change in model version, while M3 should confirm that ocean shocks are predominantly caused by changes in the

FIG. 8. Anomaly correlation coefficient for precipitation, eval-uated against GPCP daily averages, in the tropics (208N–208S, dashed) and the northern extratropics (208–608N, solid). Squares mark where points in the U1 series are different from C1 at the 90% significance level, using confidence intervals calculated via the bootstrapping method. Anomalies are calculated with respect to climatologies taken as the mean of the forecast period 2008–10, which includes three different seasons, so some of the skill shown here is simply due to seasonal variability.

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ocean component between analysis and forecast (and not by changes in the atmospheric component).

In M2, the shock at Niño-3 (Fig. 9a) is only slightly weakened relative to M1—there is an average reduction of ;25%, with little variation across the three seasons—and is virtually unchanged in the eastern Atlantic (see Fig. S4a in the online supplemental material). This confirms that the change in ocean model version, rather than the use of bias correction during the analysis, is the dominant cause of these equatorial cold shocks. Subsurface profiles (not shown) show that ORAS4_nobiascrtn upwelling velocities in the Niño-3 region are up to 25% weaker than those in ORAS4, explaining the reduced surface cold shock.

In other areas, the shock in SST and/or air tempera-ture is slightly increased in M2 relative to M1 (see Figs. S4a,b in the online supplemental material). Thus, the inclusion of bias correction in the initializing ocean analysis (and its removal during the forecast) imparts small shocks to the upper ocean and to the lower at-mosphere (possibly through an increased component imbalance), which can either amplify or reduce the existing shocks following the change in model. In the tropics, the use of bias correction generally has a nega-tive impact on the forecast, as it shifts the ocean analysis circulation into a state that cannot be maintained for any significant length of time from the beginning of the forecast, therefore, resulting in an adjustment.

In M3, errors in the ocean develop in a similar manner to those of U1, as the two share the same ocean initial con-ditions. The large M1 shocks at Niño-3 (Fig. 9b) and in the eastern equatorial Atlantic (see Fig. S4c in the online supplemental material) are entirely absent, confirming that the ocean initialization is the source of the M1 shocks. The air temperature shock in the eastern Pacific (see Fig. S4d in the online supplemental material) is also re-duced, relative to M1—the lack of cold shock in the un-derlying SST is likely the main reason for this, since the two biases (in SST and 1000-hPa temperature) are strongly correlated in this area in M1. A reduction in atmospheric shock here may arise also due to the slightly better initial balance present in this area in M3 (which is very similar to the balance in U1, shown inFig. 2a) compared to M1. Elsewhere, air temperature RMSE is very similar to that of M1, confirming that it is the change in atmospheric model version that produces a large component of these wide-spread biases on the first day. The influence of the atmo-spheric initialization on SST can be seen in the slightly increased SST drift in M3 compared to U1 (Fig. 9b).

4. Discussion

The results presented above suggest a definite impact on short-range forecasts of changes in ocean or atmosphere

model between analysis and forecast, but show only a small (though significant) effect due to an imbalance in the initial conditions. An important factor in the per-formance of C1 and U1 forecasts is the use of nudging toward a complete gridded SST product, rather than assimilation of individual SST observations, in the ocean analyses. This ensures that U_ocean SSTs remain, al-most everywhere, very close to the observational prod-uct, the field that is seen by the atmosphere during U_atmos (seeFig. 2a). While this is beneficial with regard to minimizing initialization shock in U1, direct assimi-lation of satellite SST observations may be preferred to nudging in ocean analyses, since the latter is currently done by modifying air–sea fluxes rather than the ocean model itself (Balmaseda et al. 2013). If assimilation is

FIG. 9. (a) SST series for M1 and M2, and analyses ORAS4 and ORAS4_nobiascrtn, in the Niño-3 region (where the largest shocks are produced in M1, M2, and M3). (b) SST series for U1, M1, and M3, and analyses ORAS4 and U_ocean, again in Niño-3, averaged over the ensemble of 18 dates used for the M3 experiment. Forecast series are plotted at 0, 6, 12, 18, and 24 h, and every 12 h thereafter; analysis series U_ocean is plotted at the same frequency, but only daily means are plotted for ORAS4 and ORAS4_nobiascrtn.

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used, any gaps in observational coverage will lead to periods without observational increments during which uncorrected model SSTs could diverge substantially from the field seen by the atmosphere. This would result in imbalances that are more temporally variable, and at times larger, than those shown inFig. 2.

Therefore, the differences in C1 and U1 forecast RMSE and skill shown here should perhaps be taken as a lower limit. That is, the benefits of coupled DA to fore-casting may be felt more strongly if assimilation of SST is used rather than nudging in the uncoupled ocean analysis, at least in any data-sparse regions. Where SST nudging is used in conjunction with one-directional coupling of separate ocean and atmosphere analyses, the gains in forecast skill due to reductions in initialization shock following the implementation of a coupled DA system similar to CERA may, based on these results, be small. This is more a statement of the acceptable degree of balance achieved in the U1 initialization than a criticism of coupled DA. Additionally, coupled DA may result in a more accurate analysis than uncoupled assimilation (Laloyaux et al. 2015), which could lead to further gains in forecast skill, separate to any achieved through re-ductions in initialization shock, although this was not the case in the precipitation results shown here.

With regard to the relative merits of a more strongly coupled DA method (one involving the modeling of cross covariances to spread information between the two model components), while this offers the potential to produce a more balanced initial state than is produced by CERA, which should in itself lead to better forecasts, it seems unlikely that forecast skill will be further improved specifically by a reduction in initialization shock, judging by the similarity in skill between C1 and U1 (Fig. 8).

To mitigate the shocks that can result from the use of bias correction in the ocean analysis (Fig. 9a), it can be argued that the bias correction term, estimated during the initialization phase, should be maintained during the forecast itself. This would not only reduce the overall initialization shock, but would also slow the model drift. However, this is not possible in forecasts using uncoupled initialization methods (such as U1, M1, and M2), due to the different biases present in the forced ocean model compared to the coupled forecast model (and potentially differences between the analysis and forecast models themselves). Such a method would be possible in a forecast of type C1, however, and the viability and use-fulness of this approach should be investigated.

A further consideration, not described so far in this paper, is that large adjustments in the upper ocean (evidence of which was seen inFig. 6) could generate shock signals that propagate beyond the 10-day dura-tion of the forecasts shown here, due to the longer

dynamical time scale of the upper ocean. Several ex-ploratory 7-month forecasts, which are described in the online supplemental material, have shown evidence of spurious Rossby waves propagating westward in the equatorial Pacific, following a change in ocean model version between analysis and forecast. Significant dif-ferences in the upper ocean between forecasts of type M1 and M3 were seen at lead times of up to 7 months (see Figs. S5 and S6 in the online supplemental mate-rial). The impact on seasonal forecasts of using non-native ocean models for initialization is a possible area for further study.

The results of this work should serve as useful guidance for medium-range and seasonal forecasting at opera-tional centers. Besides finding hints of a slight increase in atmospheric forecast skill when using coupled DA rather than uncoupled assimilation methods for initialization, we have also shown that initialization shock can be gen-erated through the use of nonnative models for the cre-ation of initial conditions. Depending on the resources available to an operational center, using initial conditions derived from an older version of the operational forecast model, possibly at lower resolution, or from another model entirely, may be the most practical option for seasonal forecasting. Even if not the case for the forecast itself, this may be more common in performing the set of calibration hindcasts (e.g.,MacLachlan et al. 2015) that forms an essential component of a seasonal forecast (and is also valuable at shorter ranges;Hamill et al. 2004). The hindcasts are used to compute a posteriori bias correction terms, so it is important that the temporal evolution of bias in the hindcasts is as similar as possible to the de-velopment of bias in the forecast [as discussed byHamill et al. (2004)]. In either case, it has been shown that using nonnative analyses for forecast or hindcast initialization does result in substantial initialization shocks in both at-mosphere and ocean.

Various studies have declined to use nonnative at-mospheric analyses directly as initial conditions for coupled forecasts, preferring to nudge toward these analyses (e.g.,Hudson et al. 2011) or to initialize a model atmosphere by forcing with observed SSTs (e.g.,

Alessandri et al. 2010). The results above confirm that there is indeed good reason to avoid direct use of a nonnative analysis (even when derived from the same model ‘‘family’’) in initialization, in the ocean as well as in the atmosphere, if possible. The detrimental aspect of nudging a forecast model toward such an analysis lies in the production of initial conditions that may lie further from the truth, and the optimal nudging strength—one that balances accuracy in the initial state with min-imization of shock, so as to produce the most skillful forecast—is likely to be strongly model dependent. For

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example, we have not investigated whether or not a forecast system initialized from ERA-Interim and ORAS4, and comprising model versions 31r2 and 3.0 (see Table 1), outperforms M1 in forecast skill by removing a major component of the initialization shock at the expense of using deprecated, and inferior, forecast models. The decision over whether or not to use the operational forecast system without also generating initial conditions using the same system will depend on the degree of improvement offered by the newer system in comparison to the one that generated the initial conditions that are already available. Our results do suggest that, where possible, initial conditions for both forecasts and hindcasts should be obtained through an-alyses using the same models.

5. Conclusions

We have identified initialization shocks in sets of coupled forecasts for which the initial conditions were obtained using uncoupled data assimilation in the at-mosphere and ocean. Three distinct sources of shock, with varying degrees of impact on the forecasts, have been identified:

1) A lack of balance between the atmospheric and oceanic components of the initial state exerts an influence on the forecast drift, as seen through the comparison of forecast types C1 and U1. Initializa-tion shocks of this type occur most strongly in regions of large SST temporal variability. Their impact on forecast skill, measured by ACC in total precipita-tion rates, appears to be neutral. This source of shock may be atypically weak in the present case due to the use of SST nudging in the ocean analysis, which limits the size of atmosphere–ocean imbalances that can form in the initial conditions.

2) A change in model version from analysis to forecast, which occurs in the atmosphere in M3 and in both ocean and atmosphere in M1 and M2, leads to larger and more widespread initialization shocks. These occur due to differences between model attractors, and are particularly strong in the equatorial ocean, in the present case. Oceanic shocks have the potential to exert an influence on the seasonal time scale. 3) The use of bias correction during the ocean analysis,

and its removal during the forecasts, can impart further initialization shocks in the upper ocean, at least when different model versions are used for analysis and forecast. These shocks are generally less substantial than those caused by the change in model. These results strengthen the case for operational sea-sonal forecasting centers to perform new ocean and

atmosphere reanalyses, and consistent sets of calibration hindcasts, whenever the operational model is upgraded. The benefit to forecasting of aiming to minimize ini-tialization shock by using coupled data assimilation to produce these analyses, rather than performing uncou-pled assimilation using the operational models, is less clear, but may emerge more strongly if assimilation of SST is used in preference to nudging toward a gridded product, during the ocean analysis.

Acknowledgments. We thank three anonymous re-viewers for their comments, which have improved the clarity of this manuscript. This work was funded by the U.K. Natural Environment Research Council (ERGODICS project), the European Space Agency (Data Assimilation Project), and the European Commission (ERA-CLIM2 FP7 Project). The work was accomplished through an ECMWF Special Project (spgbhain). The data presented in this work are available on request.

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The optimized MWPA was concentrated and extracted using ethyl acetate and was further determined for its antimicrobial properties against Gram positive and Gram negative bacterial

There are infinitely many principles of justice (conclusion). 24 “These, Socrates, said Parmenides, are a few, and only a few of the difficulties in which we are involved if

19% serve a county. Fourteen per cent of the centers provide service for adjoining states in addition to the states in which they are located; usually these adjoining states have

The high level of coastal litter in the study region adds to the findings of the Report on the State of the Mediterranean Marine and Coastal Environment, which

1D, 2D, 3D: one, two, three dimensional; ASD-POCS: adaptive-steepest-descent-projection-onto-convex-sets; CBCT: cone beam computed tomography; CG: conjugate gradient; CT: