16S rRNA Gene Sequence
Necessity of Quality Controlled 16S rRNA Gene Sequence Databases: Identifying Nontuberculous MycobacteriumSpecies
... terial 16S rRNA gene sequence databases or alternative mo- lecular information, some results will often remain inconclu- ...that sequence databases be of the best quality to overcome ...
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16s Rrna gene sequence, secondary structure and restriction sites analysis of isolated actinomycetes from soil samples of botanical garden, Karnatak University, Dharwad
... through 16s rRNA gene sequencing and identification of restriction ...and 16S ribosomal RNA studies suggested that the isolate belongs to Streptomyces ...The rRNA secondary structure ...
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Genomic analysis of a novel strain of Bacillus nealsonii, isolated from Surti buffalo rumen
... conditions. Sequence analysis revealed a GC content of ...housekeeping gene sequences for RNA polymerase subunit B (rpoB) and gyrase A (gyrA) identified sequence similarity within the Bacillus genus, ...
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Reclassification of Pasteurella gallinarum, [Haemophilus] paragallinarum, Pasteurella avium and Pasteurella volantium as Avibacterium gallinarum gen. nov., comb. nov., Avibacterium paragallinarum comb. nov., Avibacterium avium comb. nov. and Avibacterium volantium comb. nov.
... by 16S rRNA gene sequence comparison formed a single sub- group within the Avian 16S rRNA-group of Pasteurellaceae together with the species Pasteurella gallinarum, Pasteurella ...
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Development of a reference data set for assigning Streptococcus and Enterococcus species based on next generation sequencing of the 16S–23S rRNA region
... consensus sequence, it was at maximum level of ...whole 16S–23S rRNA region, counting for Streptococcus from 4251 ...with 16S–23S rRNA se- quences deposited in the GenBank database ...
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Isolation and Characterization of a Black PigmentedCorynebacterium sp from a Woman with Spontaneous Abortion
... as 16S rRNA gene sequence analysis, have allowed the identifi- cation of several new species of Corynebacterium from clinical specimens (4, 5, 11, ...
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High-quality draft genome sequence and description of Haemophilus massiliensis sp. nov.
... % 16S rRNA sequence iden- tity with Haemophilus parasuis strain ATCC 19417 T (GenBank accession number AY362909), the phylogenetically-closest bacterial species with a validly published name ...% ...
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Comparison of the Vitek MS and Bruker Matrix Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry Systems for Identification of Chryseobacterium Isolates from Clinical Specimens and Report of Uncommon Chryseobacterium Infections in Humans
... 16S rRNA gene sequence ...the 16S rRNA gene were as described previously ...of 16S rRNA gene was 1,498 bp. The assembled sequences of 16S ...
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Selective antimicrobial profile of a newly isolated thermostable Brevibacillus borstelensis
... A thermophilic bacterium Brevibacillus borstelensis strain RH 102 was isolated from the municipal garbage dumping site through plate exposure method. The cell free supernatants (CFS) of this strain were screened for ...
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Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)
... Figure 1. Phylogenetic tree highlighting the position of the family aligned characters [8,9] of the 16S rRNA gene sequence under the maximum likelihood (ML) criterion [10]. Root- ing was done ...
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Sequence Diversity of Neisseria meningitidis 16S rRNA Genes and Use of 16S rRNA Gene Sequencing as a Molecular Subtyping Tool
... of 16S rRNA genes and genetic relationship among meningococcal strains of different ...diverse 16S types among strains of serogroups B and C than among serogroups A and Y, which supports previous ...
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Three Cases of Anaerobiospirillum succiniciproducens Bacteremia Confirmed by 16S rRNA Gene Sequencing
... the 16S rRNA genes of the isolates revealed no close relatives (organisms likely to be in the same genus) in the sequence databases, nor were any sequence data available for ...the 16S ...
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Inventory of new microbial taxa from Iran
... including 16S ribosomal RNA (rRNA) sequences, genomic similarity as evidenced by at least 70% hybridization of their DNAs (DNA-DNA hybridization; DDH) and phenotypic data including morphology, physiology, ...
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Genome analysis of a new Rhodothermaceae strain isolated from a hot spring
... NaCl. 16S rRNA gene sequence analysis demonstrated that this strain is most closely related ( < 90% sequence identity) to Rhodothermaceae, which currently comprises of six genera: ...
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Genomics of the Uncultivated, Periodontitis-Associated Bacterium Tannerella sp. BU045 (Oral Taxon 808)
... its 16S rRNA gene sequence (GenBank accession number KC203065), which is about 98% identical to both Tannerella ...of 16S rRNA and other ...
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Phenotypic and Genotypic Characterization of Clinical Strains of CDC Group IVc 2
... and 16S rRNA gene analysis were com- bined with biochemical data to assist in identification and ...highest 16S rRNA gene similarity was with Ralstonia eutropha and Ralstonia ...
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A new agent of mycobacterial lymphadenitis in children: Mycobacterium heidelbergense sp nov
... the 16S rRNA gene sequence revealed a unique sequence and positioned the strain phylogenetically on a branch separate from ...the 16S rRNA gene level. Despite 99.6% ...
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Complete genome sequence of Actinosynnema mirum type strain (101T)
... five 16S rRNA genes in the ...reported 16S rRNA gene sequence are probably due to sequencing errors in the previously reported sequence ...
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Draft genome sequence of Thermoactinomyces sp. strain AS95 isolated from a Sebkha in Thamelaht, Algeria
... the 16S rRNA gene sequence similarity searches by BLASTN against the NCBI-NT database, strain AS95 showed 97 – 99 % sequence similarity to members of the genus ...A 16S ...
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Burkholderia dipogonis sp. nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia
... Abstract: Seven strains, ICMP 19430T, ICMP 19429, ICMP 19431, WSM4637, WSM4638, WSM4639 and WSM4640 were isolated from nitrogen-fixing nodules on the roots of the invasive South African legume Dipogon lignosus (subfamily ...
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