amino acid sequence identity
Signaling Lymphocytic Activation Molecule Family Receptor Homologs in New World Monkey Cytomegaloviruses
... Throughout evolution, large DNA viruses have been usurping genes from their hosts to equip themselves with proteins that re- strain host immune defenses. Signaling lymphocytic activation molecule (SLAM) family (SLAMF) ...
14
Complete nucleotide sequence of an Amerindian human T-cell lymphotropic virus type II (HTLV-II) isolate: identification of a variant HTLV-II subtype b from a Guaymi Indian.
... When compared with prototype HTLV-IIMOT, HTLV-IIG12 showed an overall nucleotide sequence identity of 95.4%, while the predicted amino acid sequence identity was approximately 98%.. Desp[r] ...
6
Novel β-Lactamase blaARL in Staphylococcus arlettae
... nucleotide sequence identity between the genes and 48% amino acid sequence identity between the  -lactamases ARL and PC1 encoded by ...71% amino acid ...
6
Characterization of Group C Rotaviruses Associated with Diarrhea Outbreaks in Feeder Pigs
... nucleotide identity and deduced amino acid iden- tity of the VP7 gene between the Cowden and HF porcine and the Shintoku bovine strains ranged from 74 to 75% and 70 to 74%, ...nucleotide ...
5
Genetic Variability of the G Glycoprotein Gene of Human Metapneumovirus
... overall amino acid sequence identity of 90%, and the great- est diversity was observed for the G protein (37% identity) ...revealed amino acid sequence identities ...
6
Physiological and Molecular Characterization of a Brassionosteroid-Deficient Tomato Mutant
... translated sequence of this partial cDNA (Altschul et ...79% identity and 91% similarity to the amino acid sequence of BRU1 gene (Fig ...significant sequence identity with ...
135
Phylogenetic characterization of the Palyam serogroup orbiviruses
... genome sequence of only one, Kasba, has been ...(EEV). Amino acid sequence analysis revealed that the gene encoding VP7 was the most conserved within serotypes and VP2 and VP5 showed the ...
13
Metagenomic Characterization of Airborne Viral DNA Diversity in the Near-Surface Atmosphere
... 1 sequence; RD-rain, 6 sequences) related to gemi- niviruses were distantly related to previously known geminivi- ruses, whereas most of the contigs were closely related to SsHADV-1 ...nonanucleotide ...
11
Discovery of a Novel Coronavirus, China Rattus Coronavirus HKU24, from Norway Rats Supports the Murine Origin of Betacoronavirus 1 and Has Implications for the Ancestor of Betacoronavirus Lineage A
... deduced amino acid sequences of the open reading frames (ORFs) were compared to those of other CoVs for which complete genomes are avail- able using the sequences in CoVDB ...higher sequence ...
17
Quaranfil, Johnston Atoll, and Lake Chad Viruses Are Novel Members of the Family Orthomyxoviridae
... the sequence level, high-throughput sequencing of RNA extracted from JAV- or LKCV-infected Vero cells was ...detectable sequence similarity to known ortho- myxoviruses and were closely related to the ...
8
Allergenic Characterization of Tropomyosin from the Dusky Brown Cockroach, Periplaneta fuliginosa
... Household arthropods are one of the most common causes of allergic diseases. Four species of cockroaches are found to reside in Korean homes, but published work deals almost exclusively with the German and American ...
7
Identification and Molecular Characterization of a Bovine G3 Rotavirus Which Causes Age Independent Diarrhea in Cattle
... identical amino acid composition. It had 92 to 96% deduced amino acid (80 to 88% nucleotide) identity with the NSP4s of bovine rotaviruses NCDV, B223, and BRV033 but 83 to 86% deduced ...
6
Molecular characterization of a defensin gene from a hard tick, Dermacentor silvarum
... species, sequence alignment and phylogenetic analysis were conducted using multiple sequence alignment soft- ware Clustal X2 ...nucleotide sequence of Ds-defensin shared 98.2% identity with a ...
5
Expression of two isoforms of the vacuolar type ATPase subunit B in the zebrafish Danio rerio
... a sequence identity of ...of identity with sequences of the subunit B isoforms of the European eel and of rainbow ...resulting sequence information, specific primers were designed for 5′ and ...
9
Serological and genomic characterization of porcine rotaviruses in Thailand: detection of a G10 porcine rotavirus
... 326 amino acids. The nucleotide and amino acid sequences of strain P343 showed a high degree of homology ...97.8% identity at the nucleotide sequence level and ...97.6% identity ...
8
Amino Acid Differences in the 1753-to-1851 Region of TcdB Influence Variations in TcdB1 and TcdB2 Cell Entry
... overall identity, a 99-amino- acid region previously associated with cell entry and spanning amino acids 1753 to 1851 has only 77% sequence ...substantial sequence variation in ...
10
Spleen necrosis virus, an avian immunosuppressive retrovirus, shares a receptor with the type D simian retroviruses.
... The predicted amino acid sequence of the envelope gene of REV-A has been reported to have about 42% amino acid identity with the env gene of the simian type D retroviruses and the type C[r] ...
6
Identification and Mapping of Two Divergent, Unlinked Major Histocompatibility Complex Class II B Genes in Xiphophorus Fishes
... Figure 1.—Genomic nucleotide sequences of platyfish MhcXima-DXB*01 and swordtail MhcXihe-DXB*01. Dashes indicate identity of Xihe with Xima. Dots represent intron sequences. Asterisks denote the position of the ...
14
Cloning and expression studies of a LFY cDNA from Brassica juncea
... predicted amino acid sequence with the reported sequences revealed that BjLEAFY-V shares 99% identity with Arabidopsis thaliana LFY protein (AtLFY) and 86% identity with Brassica ...
7
IN SILICO DIAGNOSIS OF TUBERCULOSIS IN MULTIPLE SPECIES USING SINGLE NUCLEOTIDE POLYMORPHISM AS BIOLOGICAL MARKER
... Tuberculosis, MTB or TB, is an infectious disease caused by various strains of Mycobacterium (Mycobacterium tuberculosis and Mycobacterium bovis) usually Mycobacterium tuberculosis. Tuberculosis is a major public health ...
7