Amplified fragment length polymorphism typing
Amplified fragment length polymorphism typing of HLA-DPB1 and associations with IDDM and MS
... SSO typing methods are marginally cheaper per sample than the AFLP typing method, it must be noted that the production of the oligonucleotides is ...AFLP typing costs just over A$1100, and the ...
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Apophysomyces elegans: Epidemiology, Amplified Fragment Length Polymorphism Typing, and In Vitro Antifungal Susceptibility Pattern
... Amplified fragment length polymorphism (AFLP) analysis divided the strains into two clearly different clades. The fingerprints of the environmental strains (including the type strain) were ...
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Use of Multienzyme Multiplex PCR Amplified Fragment Length Polymorphism Typing in Analysis of Outbreaks of Multiresistant Klebsiella pneumoniae in an Intensive Care Unit
... modified amplified fragment length polymorphism (AFLP) typing method to obtain a multibanding fingerprint that can be separated by agarose gel ...the typing method used here is ...
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Amplified Fragment Length Polymorphism Analysis: the State of an Art
... Many typing methods have been used to study the epidemiology of streptococcal disease, and these studies suggested a clonal expansion of certain serotypes with markedly increased ...AFLP typing is as good ...
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Amplified Fragment Length Polymorphism Fingerprinting of Mycoplasma Species
... All known mycoplasmas are parasites which usually exhibit a rather strict host and tissue specificity, and many of them are of clinical importance in human and veterinary medicine (23, 35). In spite of a wide array of ...
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Amplified Fragment Length Polymorphism Analysis versus Macro Restriction Fragment Analysis for Molecular Typing ofStreptococcus pneumoniae Isolates
... fluorescence amplified-fragment length polymor- phism (AFLP) and pulsed-field gel electrophoresis (PFGE) analysis of chromosomal restriction ...
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Evaluation of PCR Restriction Profile Analysis and IS2404 Restriction Fragment Length Polymorphism and Amplified Fragment Length Polymorphism Fingerprinting for Identification and Typing of Mycobacterium ulcerans andM marinum
... restriction fragment length polymorphism (RFLP), and amplified fragment length polymorphism (AFLP) on a set of ...
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Identification and Typing of Isolates of Cyphellophora and Relatives by Use of Amplified Fragment Length Polymorphism and Rolling Circle Amplification
... The species diversity and identification of black fungi belonging to Cyphellophora and Phialophora, which colonize and infect human skin and nails, were studied using amplified fragment length ...
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Experimental versus In Silico Fluorescent Amplified Fragment Length Polymorphism Analysis of Mycobacterium tuberculosis: Improved Typing with an Extended Fragment Range
... fluorescent amplified fragment length polymorphism (FAFLP) data were compared with in silico data for the sequenced strains of Mycobacterium tuberculosis (H37Rv and ...identify ...
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Genotyping Neisseria gonorrhoeaeUsing Fluorescent Amplified Fragment Length Polymorphism Analysis
... Molecular typing methods meet the need for higher resolution (3, 5, 10, 13, 14, 16, 18, 19, ...restriction fragment patterns that are difficult to analyze objectively and are not easily stored in a ...
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Predictive Fluorescent Amplified Fragment Length Polymorphism Analysis of Escherichia coli: High Resolution Typing Method with Phylogenetic Significance
... and EcoRI (unpublished data) showed that the choice of re- striction enzymes is an important determinant of the discrim- inatory power of FAFLP analysis. Hence, for each bacterial species the best combination of ...
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A Polymerase Chain Reaction Based DNA Fingerprinting Technique: Amplified Fragment Length Polymorphism for Molecular Typing of Perchlorate Reducing Bacteria
... TaqI fragment with the pre-amplification primers bearing 3’ single base overhang “G” and “C” for primers annealing to the EcoR 1 and TaqI adapters respectively, 24 dif- ferent primer combinations were identified ...
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Genetic Diversity of Actinobacillus pleuropneumoniae Assessed by Amplified Fragment Length Polymorphism Analysis
... the typing method was assessed using two groups of isolates (clusters c1 and c17) ...AFLP polymorphism could not likely be explained by alter- ation in genetic composition in a short time ...
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Comparison of Amplified Ribosomal DNA Restriction Analysis, Random Amplified Polymorphic DNA Analysis, and Amplified Fragment Length Polymorphism Fingerprinting for Identification ofAcinetobacter Genomic Species and Typing ofAcinetobacter baumannii
... by amplified ribosomal DNA restriction analysis (ARDRA), random amplified poly- morphic DNA analysis (RAPD), and amplified fragment length polymorphism (AFLP) ...great ...
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Fluorescent Amplified Fragment Length Polymorphism Genotyping of Salmonella enterica subsp enterica Serovars and Comparison with Pulsed Field Gel Electrophoresis Typing
... Electrophoresis Typing BJØRN-ARNE LINDSTEDT, 1 * EVEN HEIR, 1 TRAUTE VARDUND, 1 AND GEORG KAPPERUD 1,2 Department of Bacteriology, National Institute of Public Health, N-0403 Oslo, 1 and Department of ...
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Fluorescent Amplified Fragment Length Polymorphism Analysis of an Outbreak of Group A Streptococcal Invasive Disease
... Fluorescent amplified-fragment length polymorphism (FAFLP) analysis was carried out for an outbreak of group A streptococcal (GAS) invasive ...dye. Amplified fragments of up to 600 bp ...
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Use of an Amplified Fragment Length Polymorphism Technique To Fingerprint and Differentiate Isolates of Helicobacter pylori
... established typing technique for examination of the entire genome, it has not been widely used to type strains of ...existing fragment would not be readily ...
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Genome Sequence Based Fluorescent Amplified Fragment Length Polymorphism Analysis ofMycobacterium tuberculosis
... fluorescent amplified-fragment length polymorphism (FAFLP) analysis, was applied to Mycobacterium ...IS6110 typing for those strains with multiple IS6110 ...IS6110 typing would ...
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Identification and Typing of Malassezia Species by Amplified Fragment Length Polymorphism and Sequence Analyses of the Internal Transcribed Spacer and Large Subunit Regions of Ribosomal DNA
... namely, amplified fragment length polymorphism (AFLP) analysis, sequencing of the internal tran- scribed spacer, and sequencing of the D1 and D2 domains of the large-subunit ribosomal DNA ...
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Fluorescent Amplified Fragment Length Polymorphism Genotyping of Campylobacter jejuni and Campylobacter coli Strains and Its Relationship with Host Specificity, Serotyping, and Phage Typing
... Fluorescent amplified fragment length polymorphism (FAFLP) analysis was applied to 276 Campylobacter jejuni strains and 87 Campylobacter coli strains isolated from humans, pigs, cattle, ...
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