Bioinformatic analyses and results
Whole genome identification of Mycobacterium tuberculosisvaccine candidates by comprehensive data mining and bioinformatic analyses
... group of the PE family is the PE-PGRS, where the PE domain is followed by multiple tandem repeats of GGA or GGN [223,224]. In the PPE family (ProProGlu N-terminal motif, positions 7–9 in a 180 residue conserved domain) ...
25
Prognostic significance of CD44 in human colon cancer and gastric cancer: Evidence from bioinformatic analyses
... ABSTRACT CD44 is a well-recognized stem cell biomarker expressed in colon and gastric cancer. In order to identify whether CD44 mRNA could be used as a prognostic marker in colon and gastric cancer, bioinformatic ...
9
Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica
... Such results can be re flective of the actual protein sequence, but they can also be artifactual, due to sequencing er- rors or incorrect initiation codon ...
23
Expression profiling and bioinformatic analyses suggest new target genes and pathways for human hair follicle related microRNAs
... these results underline the import- ance of WNT signalling in hair biology and suggest that miRNAs are critical regulators of WNT and TP63 signal- ling in the human ...
9
Genetic and bioinformatic analyses of the expression and function of PI3K regulatory subunit PIK3R3 in an Asian patient gastric cancer library
... and bioinformatic approaches to examine PIK3R3 expression and function in GC, the second leading cause of cancer mortality world-wide and highly prevalent among ...FACS. Results: PIK3R3 was significantly ...
8
Bioinformatic analyses identifies novel protein-coding pharmacogenomic markers associated with paclitaxel sensitivity in NCI60 cancer cell lines
... A similar type of integrated analysis has been per- formed for paclitaxel by Park et al , where RPPA profil- ing along with mutation analysis and siRNA screening analysis was used to find and assess markers associated ...
12
Investigation of the underlying hub genes and mechanisms of reperfusion injury in patients undergoing coronary artery bypass graft surgery by integrated bioinformatic analyses
... DEGs, a weighted gene co-expression network based on all annotated genes was constructed. A total of five modules were recognized, and the green and yellow modules were the highest positively and negatively correlated ...
20
Bioinformatic and Biophysical Analyses of Proteins
... algorithms based on probability theory has provided a powerful means for inferring sequence homology and evolutionary relationships. 52, 53 However, these methods encounter difficulties when dealing with very divergent ...
326
Micro-ribonucleic acid expression profiling and bioinformatic target gene analyses in laryngeal carcinoma
... The numbers of differentially expressed miRNAs were larger, and were predominantly accounted for by down- regulated miRNAs. The sample size of laryngeal carcinoma samples in this study was the largest among studies on ...
9
Integrated Bioinformatic and Targeted Deletion Analyses of the SRS Gene Superfamily Identify SRS29C as a Negative Regulator of Toxoplasma Virulence
... structure analyses revealed a core SRS structural scaffold with sequence divergence that presumably reflects the diversity of host ligands ...Our results highlight the utility of integrating ...
13
Development of bioinformatic tools for massive sequencing analysis
... (DE) analyses, we show how the se- quencing depth of a sample vastly affects the detection of differentially expressed ...These results are supported in [42], where authors show that the higher the ...
154
Downregulation of hsa-microRNA-204-5p and identification of its potential regulatory network in non-small cell lung cancer: RT-qPCR, bioinformatic- and meta-analyses
... Results: The expression of miR-204-5p was downregulated in NSCLC, and the downtrend was related to gender, histological type, vascular invasion, tumor size, clinicopathologic grade and lymph node metastasis ...
27
6.0 Results of Risk Analyses
... Individual estimates of probability for each branch were given a range of probability to reflect the team’s judgment on the level of uncertainty. This range was expressed in the form of a function having a probable low, ...
18
Insights into SCP/TAPS proteins of liver flukes based on large-scale bioinformatic analyses of sequence datasets
... in-depth analyses of amino acid sequence features, such as patterns of cysteine residues and presence/absence of signal peptides, thus assisting future structural and functional analyses of members of the ...
8
Insights into SCP/TAPS Proteins of Liver Flukes Based on Large-Scale Bioinformatic Analyses of Sequence Datasets
... in-depth analyses of amino acid sequence features, such as patterns of cysteine residues and presence/absence of signal peptides, thus assisting future structural and functional analyses of members of the ...
8
Analyses of the Critical Thinking Assessment Test Results
... global results – first, the average score and how it rates by national standards; second, the percentage of the students who took the test who scored above the median national score, ...
9
TASAR Certification and Operational Approval Requirements - Analyses and Results
... Research Results from this Contract As described below in the main body of this report, the TASAR EFB application was analyzed in detail against applicable FAA regulatory documents to determine certification and ...
183
Bioinformatic Approaches for Genome Finishing
... We describe now first, how the different programs were used and how the esti- mated adjacencies were extracted, and then discuss the results given in Table 6.4 on page 82. Except otherwise stated, we used the ...
115
Predicting clinical trial results based on announcements of interim analyses
... 2 results; evidence from trials in- volving similar treatments, such as drugs in the same class; and evidence from trials with the same treatment but different ...the results of phase 2 ...
8
Airplane Crash Simulations: Comparison of Analyses Results with Test Data
... analysis results have been compared with test results from a test program performed in the USA at Sandia National Laboratory and in Japan at Kobori Research Complex and Central Research Institute of the ...
8