Brachypodium distachyon
Identifying Brachypodium distachyon proteins interacting with histone deacetylase BdHD1
... The aim of this study was to investigate whether the histone deacetylase BdHD1 found in Brachypodium distachyon forms protein-protein interactions. BdHD1 is one of twelve histone deacetylases (HDACs) found ...
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Molecular characterization of LMW-GS genes in Brachypodium distachyon L. reveals highly conserved Glu-3 loci in Triticum and related species
... system. Brachypodium distachyon L. (B. distachyon), a member of the Pooideae subfamily and a temperate wild annual grass endemic to the Mediterranean and Middle East [13], has been rapidly ...
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Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus
... Fig. 5 The effect of 50 µM methyl-jasmonate (MeJA) on cell wall HCA (a-c) and lignin (f) content in Brachypodium distachyon callus AIR (alcohol insoluble residue) after 1, 2, 4 and 8 days treatment (Expt. ...
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Improving biomass production and saccharification in Brachypodium distachyon through overexpression of a sucrose-phosphate synthase from sugarcane
... Vogel, J.P., Gu, Y.Q., Twigg, P., Lazo, G.R., Laudencia-Chingcuanco, D., Hayden, D.M., Donze, T.J., Vivian, L.A., Stamova, B., Coleman-Derr, D. (2006) EST sequencing and phylogenetic analysis of the model grass ...
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Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus
... RNA was extracted from 32 samples generated in Expt. 3 (2 treatments × 4 timepoints × 4 reps) as previously described by Chang et al. (1993). RNA sequencing was performed on an Ion Proton™ System. Libraries were made ...
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Evaluation of the Water Stress-Inducible Promoter Wsi18 in the Model Monocot Brachypodium distachyon
... (Brachypodium distachyon) and the Triticeae tribe which includes crops such as wheat, rye, and barley (The International Brachypodium Initiative, ...
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Investigations of barley stripe mosaic virus as a gene silencing vector in barley roots and in Brachypodium distachyon and oat
... species Brachypodium distachyon as well as the increasing amount of EST sequence information available for oat (Avena species) have created a need for tools to study gene function in these ...B. ...
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Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis
... Background: Brachypodium distachyon constitutes an excellent model species for ...of Brachypodium as a model species is of particular value in the areas of cell wall and biomass research, where ...
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Evaluation of Drought Stress Inducible Wsi18 Promoter in Brachypodium distachyon
... in Brachypodium distachyon plants exposed to ABA and man- ...B. distachyon plants were produced and then subjected to ABA or mannitol ...B. distachyon which is a model plant for molecular ...
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Genetic, Geographic, and Climate Diversity of a Weedy Species: The Brachypodium distachyon Species Complex
... the Brachypodium distachyon complex with my own R scripts used to calculate sensitive suitable surface ...B. distachyon had the largest potential area at 5,098,573 square kilometers in potential ...
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Reduced susceptibility to Fusarium head blight in Brachypodium distachyon through priming with the Fusarium mycotoxin deoxynivalenol
... Blümke, A., Sode, B., Ellinger, D. et al. (1 more author) (2015) Reduced susceptibility to Fusarium head blight in Brachypodium distachyon through priming with the Fusarium mycotoxin deoxynivalenol. ...
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Genetic Analysis of Nitrate Transporter 2 Family in Brachypodium distachyon, with an Essential Role of BdNRT2.1 to Nitrogen Use Efficiency
... plant Brachypodium distachyon (Brachypodium), which diverged from wheat 32-39 million years ago, and from rice 40- 53 million years ago (The International Brachypodium Initiative, 2010), is ...
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Inactivation of LACCASE8 and LACCASE5 genes in Brachypodium distachyon leads to severe decrease in lignin content and high increase in saccharification yield without impacting plant integrity
... in Brachypodium distachyon (Brachypodium) have proposed roles in lignification for LACCASE5 (LAC5, Bradi1g66720) and potentially LAC- CASE6 (LAC6, Bradi1g74320) ...in Brachypodium ...
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Phylogeny in defining model plants for lignocellulosic ethanol production: a comparative study of Brachypodium distachyon, wheat, maize, and Miscanthus x giganteus leaf and stem biomass
... B. distachyon would be conserved during fermentation, we performed a lambda scan of sulfuric acid and enzymatic pretreated cell walls 72 h after start of ...B. distachyon stem sample was comparable to the ...
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The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes
... rice, Brachypodium, wheat, and maize are represented on ...In Brachypodium, both ORF133 and accD are missing, and the entire rbcL-psaI spacer region, containing only the rbcL 3'UTR and psaI promoter ...
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Proteome and phosphoproteome characterization reveals new response and defense mechanisms of Brachypodium distachyon leaves under salt stress
... An Overview of Response and Defense Mechanisms of B. distachyon Under Salt Stress—Based on the above results, a systematic salt response and defense pathway in B. dis- tachyon was proposed (Fig. 8). The ion stress ...
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Modified expression of ZmMYB167 in Brachypodium distachyon and Zea mays leads to increased cell wall lignin and phenolic content
... in Brachypodium, the relative percentage of thioacidolysis released S and G lignin monomers, and hence the S/G ratio, were not substantially different between the ZmMYB167-OX lines and controls, averaging ~56% and ...
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Alignment of the Genomes of Brachypodium distachyon and Temperate Cereals and Grasses Using Bacterial Artificial Chromosome Landing With Fluorescence in Situ Hybridization
... positions. Figure 3A shows two such clones colocalizing to the distal tip of chromosome 1q. However, if the resolution of mapping is enhanced through the use of longer chromosomes at zygotene of meiosis, the two loci are ...
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PHYTOCHROME C Is an Essential Light Receptor for Photoperiodic Flowering in the Temperate Grass, Brachypodium distachyon
... A genomic PHYC fragment including 1 kb upstream from the start site was amplified from Bd21-3 DNA using the primer pairs listed in Table S2. DNA of the correct size was gel extracted (Qiagen) and cloned into pENTR-D-TOPO ...
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A dynamic model of lignin biosynthesis in Brachypodium distachyon
... in Brachypodium, but our modeling efforts, adhering to the simplicity of Ockham’s razor, do not require these features, possibly only because the same types of data are not available for the various spe- ...
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