Candidate gene based association mapping analysis
Candidate Gene Association Mapping of Arabidopsis Flowering Time
... through candidate gene association mapping using 51 flowering time ...structured association techniques, we find that haplotype-tagging SNPs in 27 flowering time genes show significant ...
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QTL analysis for chalkiness of rice and fine mapping of a candidate gene for qACE9
... Fig. 2 Locations of QTLs on SNP map. Number indicates genetic distance (cM) along each chromosome. HZ represents Hangzhou, HN represents Hainan and RD represents reported QTL Fig. 3 Fine mapping of qACE9 for ACE. ...
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QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple
... of candidate genes underlying major QTLs was then performed in silico and permitted the identification of 18 enzymes of the polyphenol pathway and six transcription factors involved in the apple anthocyanin ...
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QTL analysis and candidate gene mapping for the polyphenol content in cider apple
... of candidate genes underlying major QTLs was then performed in silico and permitted the identification of 18 enzymes of the polyphenol pathway and six transcription factors involved in the apple anthocyanin ...
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Optimal Designs for Linkage Disequilibrium Mapping and Candidate Gene Association Tests in Livestock Populations
... enced this ranking of strategies. First, when many off- their daughters, generally performed as well or better than any of the discordant approaches applied only spring of fewer sires were used, the sibs likely shared ...
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Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches
... Copyright: ß 2014 Thudi et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, ...
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QTL mapping and candidate gene analysis of peduncle vascular bundle related traits in rice by genome-wide association study
... Phenotypic investigation All of these accessions were grown in Sanya (18.3 o N, 109.3°E) during Dec 2014–April 2015 and Dec 2015– April 2016 and each accession was planted in two rows with 10 individuals each row at a ...
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Candidate Gene Association Study for Diabetic Retinopathy in Persons with Type 2 Diabetes: The Candidate Gene Association Resource (CARe)
... sensitivity analysis by removing the FinnDiane and Go-DARTS cohorts— the former because it had type 1 diabetes participants exclu- sively and both because they did not use ETDRS grading con- sistently for ...
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Molecular mapping and candidate gene analysis for resistance to powdery mildew in Cucumis sativus stem.
... initial mapping region of pm-s. The analysis on the F 2 mapping population using the new molecular markers showed that 17 SSR markers were confirmed to be linked to the pm-s ...this gene on ...
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QTL mapping and candidate gene analysis of ferrous iron and zinc toxicity tolerance at seedling stage in rice by genome-wide association study
... linkage mapping only evaluate two alleles and provide limited insight into the analysis of complex traits unless the population is very large [19], association mapping is becoming an ...
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Density based clustering in haplotype analysis for association mapping
... haplotype-based association mapping has the potential to improve power by reducing the degrees of freedom without sacrificing important information about the underlying genetic ...for ...
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Linkage Mapping of 1454 New Maize Candidate Gene Loci
... of candidate genes putatively involved in agriculturally important ...toward mapping of these genes, we used two populations of intermated recombinant inbred lines (IRILs), which allow a higher map ...
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Candidate gene based association study for nitrogen use efficiency and associated traits in maize
... Rth3 399 BOXCPSAS1 CTCCCAC 399 G→A Box C in pea (P.s.) asparagine synthetase (AS1) gene; AS1 is negatively regulated by light; Box C binds with nuclear proteins, which was completed by a putative repressor element ...
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Candidate gene association studies and risk of Hodgkin lymphoma: a systematic review and meta-analysis.
... in candidate gene association studies and in our ...spurious association becomes an increasing problem with increasing study ...and analysis of the ...
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Improvement of association based gene mapping accuracy by selecting high rank features
... whole-genome association studies of common diseases using case-control data in the near ...any gene mapping method, it is desirable to see that the performance of the method improve with denser ...
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Candidate gene association study in pediatric acute lymphoblastic leukemia evaluated by Bayesian network based Bayesian multilevel analysis of relevance
... STAT3 gene were found to decrease the risk to hyperdiploid ...drug candidate prevented oxidative stress- induced activation of STAT3 and overcame the resist- ance of human B-lineage leukemia/lymphoma cells ...
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Candidate gene association study in pediatric acute lymphoblastic leukemia evaluated by Bayesian network based Bayesian multilevel analysis of relevance
... STAT3 gene were found to decrease the risk to hyperdiploid ...drug candidate prevented oxidative stress- induced activation of STAT3 and overcame the resist- ance of human B-lineage leukemia/lymphoma cells ...
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Genome-wide and candidate gene association studies of placental abruption
... IPKB. Gene-enrichment of net- works was assessed using network score based on a modified Fisher’s exact ...of gene function networks in relation to ...
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Analysis of Human Sarcospan as a Candidate Gene for CFEOM1
... its association with other proteins known to be involved in muscular diseas- es, sarcospan has been proposed as a candidate disease gene for CFEOM1 ...
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Family based association mapping provides evidence for a gene for reading disability on chromosome 15q
... three-marker association was signifi- cantly stronger than the association observed with D15S994 ...haplotype association with RD in the second sample, but failed to replicate the single- (D15S994) ...
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