comparative genomic analysis
Comparative Genomic Analysis of Hyperthermophilic Archaeal Fuselloviridae Viruses
... SSVs and their Sulfolobus hosts are emerging as a model system for examining archaea and life at high temperatures. We are interested in the evolution of SSVs, the function of SSV-encoded gene products, and viral ...
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Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
... The comparative genomic analysis of these six Glossina species highlights the important aspects of Glossina evo- lution and provides further insights into their unique ...other comparative ...
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Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
... The comparative genomic analysis of these six Glossina species highlights the important aspects of Glossina evo- lution and provides further insights into their unique ...other comparative ...
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Genome sequencing, annotation and comparative genomic analysis of Shigella dysenteriae strain SD1D
... reference to epidemics. The current gold standard for the detection of Shigella species in fecal specimens involves isolation, growth and identification of Shigella in the cul- tures. Isolates of Shigella can also be ...
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Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri
... A comparative genomic analysis between the genome of phage eiAU and that of phage SSL-2009a revealed that genome regions encoding many putative structural and replica- tion proteins are shared by ...
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Comparative genomic analysis of multidrug-resistant <em>Streptococcus pneumoniae</em> isolates
... and comparative genomic analysis of 25 pneumococcal isolates, we have shown that although pneumococcal isolates were similar on genetic background, strains were diverse at the genomic ...the ...
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Comparative genomic analysis of the ‘pseudofungus’ Hyphochytrium catenoides
... tivity analysis and high-throughput culture arrays to investigate the ancestry of oomycete/pseudofungal characteristics, demonstrating that many of the genetic features associated with parasitic traits evolved ...
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Comparative genomic analysis of the Tribolium immune system
... this comparative over- view of the Tribolium defense system, we describe plausible immune pathway models and present information regarding the molecular evolution of innate immunity in holometabo- lous ...
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Complete Genome Sequence and Comparative Genomic Analysis of
... Fig. 1. Circular representation of the M. massiliense JCM 15300 genome and comparative analysis among the complete genomes of Mycobacterium species. A. BLAST atlas of M. massiliense JCM 15300. The coding ...
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Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses
... Compared to their rice ortholog, sorghum and maize PPDK-RP genes have accumulated sig- nificantly more amino acid substitutions (Table 1; Table S4 in Additional data file 1), providing s[r] ...
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Delineation of Steroid Degrading Microorganisms through Comparative Genomic Analysis
... Combined analysis of bacterial, archaeal, and fungal genomes with both hidden Markov models and reciprocal BLAST identified 265 putative steroid degraders within only Actinobacteria and Proteobacteria, which ...
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Comparative genomic analysis of primary tumors and metastases in breast cancer
... statistical analysis; iii) the delivery of different systemic treatments before the metastatic progression; iv) the relatively small number of genes analyzed by NGS, even if more comprehensive sequencing (whole ...
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Comparative genomic analysis of the multispecies probiotic-marketed product VSL#3
... and genomic data analysis allowed us to identify the 7 species present in the VSL#3 product as specified by the ...strains). Comparative genomics revealed that the draft genomes of the ...individual ...
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Massive comparative genomic analysis reveals convergent evolution of specialized bacteria
... According to your suggestion, we have performed the con- trol analysis to verify that the 100 lost COGs are specific to the reductive evolution of obligate intracellular bacte- ria. For that we have separated ...
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Comparative genomic analysis of fungal genomes reveals intron rich ancestors
... Computational analysis and genome anno- tation pipelines were performed on the Duke Shared Cluster Resource in the Center for Computational Science, Engineering, and ...
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Comparative genomic analysis reveals bilateral breast cancers are genetically independent
... the genomic level that provides new insight into the development of bilateral breast cancer, although we cannot completely rule out the possibility of that they have the same clonal or sub-clonal origin because of ...
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Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity
... Due to the large pan-genome, each strain appeared to exhibit highly diverse genetic content even within the Moko, NPB and brown rot groups. This variability can be partially explained by the estimation of gene gain and ...
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OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
... Evaluating the utility of reliability scores in meta- analysis approaches Two different approaches have been used to infer reliability of predictions in meta-analyses. One is to use the number of methods that ...
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Comparative genomic analysis and phenazine production of Pseudomonas chlororaphis, a plant growth-promoting rhizobacterium
... Our analysis showed that ...The genomic information indicated that the production of antifungal metabolites differed but all of four strains have one phenazine biosynthesis gene ...The analysis of ...
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Comparative genomic analysis and characteristics of NCCP15740, the major type of enterotoxigenic Escherichia coli in Korea
... many genomic changes that determine the branch of a strain in a phylogenetic tree, includ- ing SNPs, insertions, deletions, prophages, and other insertion sequence ...
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