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Medicago genome analysis and candidate selection

The medicago truncatula genome and analysis of nodule-specific genes

The medicago truncatula genome and analysis of nodule-specific genes

... my analysis; Drs Ruihua Shi, Jianfeng Li, Shweta Deschpande, Majesta O’Bleness, Iryna Sanders who as my colleagues I could discuss everything from personal life to scientific problems; as well as Shaoping Lin, Fu ...

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Genome-Wide Analysis of Oligopeptide Transporters Gene Family in Medicago truncatula

Genome-Wide Analysis of Oligopeptide Transporters Gene Family in Medicago truncatula

... in Medicago truncatula. In short, data obtained from the analysis will help to better understand the complexity of OPT family in Medicago truncatula and evolution of OPT gene family in higher ...

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Genome-Wide Association Mapping and Genomic Selection for Alfalfa (Medicago sativa) Forage Quality Traits.

Genome-Wide Association Mapping and Genomic Selection for Alfalfa (Medicago sativa) Forage Quality Traits.

... assisted selection (MAS) and genomic selection of forage quality traits based on breeding values of parent ...Genomic selection exploited 11,450 polymorphic SNP markers, whereas a subset of 8,494 ...

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Pay for Politicians and Candidate Selection: An Empirical Analysis

Pay for Politicians and Candidate Selection: An Empirical Analysis

... our analysis is that the changes in the fraction of candidates with higher education appear to have been different for candidates in parliamentary and municipal elections preceding the salary ...

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Analysis of selection signatures in the beef cattle genome

Analysis of selection signatures in the beef cattle genome

... of selection signals in the genome differs depending on the breed and the approach applied, several common signals were found on chromosomes 2, 6, 7, 13 and ...the selection pressure within the ...

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Two stage joint selection method to identify candidate markers from genome wide association studies

Two stage joint selection method to identify candidate markers from genome wide association studies

... in genome-wide association ...model selection procedure of joint single- nucleotide polymorphism (SNP) analysis to detect genes associated with rheumatoid arthritis (RA) using Genetic Analysis ...

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A "candidate interactome" aggregate analysis of genome wide association data in multiple sclerosis

A "candidate interactome" aggregate analysis of genome wide association data in multiple sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case Control ...

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A "Candidate Interactome" Aggregate Analysis of Genome Wide Association Data in Multiple Sclerosis

A "Candidate Interactome" Aggregate Analysis of Genome Wide Association Data in Multiple Sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case Control ...

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A "Candidate-Interactome" Aggregate Analysis of Genome-Wide Association Data in Multiple Sclerosis

A "Candidate-Interactome" Aggregate Analysis of Genome-Wide Association Data in Multiple Sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case ...

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A "candidate-interactome" aggregate analysis of genome-wide association data in multiple sclerosis

A "candidate-interactome" aggregate analysis of genome-wide association data in multiple sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case ...

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A "candidate-interactome" aggregate analysis of genome-wide association data in multiple sclerosis

A "candidate-interactome" aggregate analysis of genome-wide association data in multiple sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case ...

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Detection and analysis of Darwinian selection in the mitochondrial genome of simian primates

Detection and analysis of Darwinian selection in the mitochondrial genome of simian primates

... Reconstruction of ancestral sequences has also been of value in furthering our knowl­ edge of the evolution of the primate opsin genes. As discussed above, three important amino acid positions were found to be ...

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Assessment of Osteoarthritis Candidate Genes in a Meta-Analysis of Nine Genome-Wide Association Studies

Assessment of Osteoarthritis Candidate Genes in a Meta-Analysis of Nine Genome-Wide Association Studies

... the genome level. In this context, the use of focused analysis in a subset of genes allows the selection of SNPs not reaching genome-wide significance for further vali- ...

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Selection of important variables by statistical learning in genome wide association analysis

Selection of important variables by statistical learning in genome wide association analysis

... need to explicitly model each possible interaction terms repeatedly. This feature makes it most suitable for large- scale studies such as GWAS. However, direct application of RF to 500 k or even 50 k SNPs may not be ...

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A saturated genetic linkage map of autotetraploid alfalfa (Medicago sativa L.) developed using genotyping-by-sequencing is highly syntenous with the Medicago truncatula genome.

A saturated genetic linkage map of autotetraploid alfalfa (Medicago sativa L.) developed using genotyping-by-sequencing is highly syntenous with the Medicago truncatula genome.

... The three libraries were generated based on the protocol of Elshire et al. (2011) with minor modifications. In summary, 100 ng of each DNA was digested with ApeKI (R0643L; NEB), and then ligated to a unique barcoded ...

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Whole-Genome Analysis of Candidate genes Associated with Seed Size and Weight in Sorghum bicolor Reveals Signatures of Artificial Selection and Insights into Parallel Domestication in Cereal Crops

Whole-Genome Analysis of Candidate genes Associated with Seed Size and Weight in Sorghum bicolor Reveals Signatures of Artificial Selection and Insights into Parallel Domestication in Cereal Crops

... size candidate genes were identified in sorghum, 63 of which exhibited signals of purifying selection during ...size candidate genes that exhibited differentially high expression levels in seed were ...

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Genome-Wide Association Analysis Identifies Candidate Genes Associated with Iron Deficiency Chlorosis in Soybean

Genome-Wide Association Analysis Identifies Candidate Genes Associated with Iron Deficiency Chlorosis in Soybean

... NAS3 encodes the enzyme that synthesizes the carrier that transports iron out of older leaves and via the phloem to younger leaves and fl owers. Importantly, the IDC rating is made on these younger leaves. Th erefore, ...

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Comparative analysis of different approaches for dealing with candidate regions in the context of a genome wide association study

Comparative analysis of different approaches for dealing with candidate regions in the context of a genome wide association study

... Background Genome-wide association studies (GWAS) to identify the genetic risk factors underlying complex disease are now feasible thanks to advances in genotyping technol- ogy and the development of commercial ...

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Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection

Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection

... Finally, analysis of the expression of kinase genes and other signaling systems can help characterize how dermatophytes respond to host signals in both active infection and latent coloni- ...

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A "Candidate-Interactome" Aggregate Analysis of Genome-Wide Association Data in Multiple Sclerosis

A "Candidate-Interactome" Aggregate Analysis of Genome-Wide Association Data in Multiple Sclerosis

... pathogenesis) analysis of genome-wide association data in multiple ...last genome-wide association study of the International Multiple Sclerosis Genetics Consortium & the Wellcome Trust Case ...

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