Microsatellite Genotyping and Analysis
Microsatellite Genotyping of Candida parapsilosis Clinical Isolates
... genotypic analysis, these outbreaks were probably due to cross-infections by health care workers ...and genotyping these species [12, ...methods, microsatellite analysis has been used for ...
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Assessment of an automated capillary system for Plasmodium vivax microsatellite genotyping
... lite analysis. Therefore, with microsatellite products with genotyping errors ...degenerated microsatellite markers used in this study showed a great number of non-specific products, ...
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Multilocus Microsatellite Genotyping Array for Investigation of Genetic Epidemiology of Pneumocystis jirovecii
... sarily produce the single correct haplotype due to biases such as overam- plification of shorter fragments during PCR. A further limitation to our method, which is common to all multilocus genotyping schemes, is ...
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Reliable microsatellite genotyping of the Eurasian badger (Meles meles) using faecal DNA
... Comparative multiple-tubes approach and assessment When testing the reliability of our comparative approach we found that in 293 consensus genotypes, 1 case of allelic drop-out was not detected. The error arose because ...
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Microsatellite Genotyping Clarified Conspicuous Accumulation of Candida parapsilosis at a Cardiothoracic Surgery Intensive Care Unit
... Samples. A total of 99 colonizing isolates were investigated using two different molecular typing methods. Eighty-three colonizing isolates from urine samples (n ⫽ 6) and from superficial sites, including anus (n ⫽ 4), ...
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Microsatellite genotyping of Plasmodium vivax infections and their relapses in pregnant and non pregnant patients on the Thai Myanmar border
... genetic analysis was conducted on archived samples that had been collected in the course of drug treatment studies conducted in villages along the Thai-Myanmar ...
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Noninvasive and nondestructive sampling for avian microsatellite genotyping: a case study on the vulnerable Chinese Egret (Egretta eulophotes)
... Z = −3.071, p = 0.001). Five cases of DNA contamina- tion were found in eggshell swabs, given that there was a third allele for the microsatellite markers. In order to guarantee reliability, all loci data for ...
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Microsatellite genotyping of medieval cattle from central Italy suggests an old origin of Chianina and Romagnola cattle
... [email protected] Analysis of DNA from archeological remains is a valuable tool to interpret the history of ancient animal ...15 microsatellite FAO-recommended markers with PCR products yielded ...
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From faeces to ecology and behaviour: non-invasive microsatellite genotyping as a means to study wild otters (lutra lutra)
... 2009). Significances of fixed effects were assessed by computing an analysis of variance table. Since otters in fish pond systems might have another spatial organisation than e.g. otters inhabiting linear home ...
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Microsatellite genotyping and genome wide single nucleotide polymorphism based indices of Plasmodium falciparum diversity within clinical infections
... Lee Murray 1† , Victor A. Mobegi 1,2† , Craig W. Duffy 1 , Samuel A. Assefa 1 , Dominic P. Kwiatkowski 3 , Eugene Laman 4 , Kovana M. Loua 4 and David J. Conway 1* Abstract Background: In regions where malaria is ...
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Genotyping of Bulgarian Vitis vinifera L. cultivars by microsatellite analysis
... K e y w o r d s : SSR, microsatellite, Vitis vinifera L, cultivar identification. Introduction Grapevine cultivation and winemaking in Bulgaria dates back to the times of ancient Thrace. Due to its location at the ...
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Microsatellite Based Genotyping of the Helianthus annuus L.
... ABSTRACT Genetic diversity among 35 genotypes of sunflower was determined using microsatellites (SSR markers) in the present study. Thirty five genotypes (3 CMS A lines and 32 R lines) were subjected to 34 SSR markers. ...
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Molecular Genotyping of Candida parapsilosis Group I Clinical Isolates by Analysis of Polymorphic Microsatellite Markers
... the microsatellite repeats for seven loci were ...by microsatellite analysis, and their profiles were compared to the hybridization profiles obtained by use of the Cp3-13 DNA ...C. ...
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Genotyping of a microsatellite locus to differentiate clinical Ostreid herpesvirus 1 specimens
... such analysis to describe OsHV-1 genome ...multiplex genotyping based on analysis of several microsatellites needs to be developed for ...silico analysis of the OsHV-1 genome using the ...
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A multiplex microsatellite set for non-invasive genotyping and sexing of the osprey (Pandion haliaetus)
... 37 microsatellite loci and assessed these in ospreys sampled in the UK and Norway (using mouth ...These microsatellite loci will be useful for genetic monitoring, parentage analysis and population ...
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Genotyping of Toxoplasma gondii Isolates with 15 Microsatellite Markers in a Single Multiplex PCR Assay
... GeneMapper analysis software (version ...The genotyping results of the 15-MS multiplex assay showed that the 8 typing markers (TUB2, W35, TgM-A, B18, B17, M33, ...1. Microsatellite markers and PCR ...
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Microsatellite (STRAf) Genotyping Cannot Differentiate between Invasive and Colonizing Aspergillus fumigatus Isolates
... Clinical Microbiology and Infectious Diseases Department, Hospital General Universitario Gregorio Marañón, Universidad Complutense de Madrid, Madrid, Spain a ; Instituto de Investigación Sanitaria del Hospital Gregorio ...
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Grapevine microsatellite repeats: Isolation, characterisation and use for genotyping of grape germplasm from Southern Italy
... 1998). Microsatellite markers ap- pear to be useful tools for genetic resources management since they allow accurate identification of germplasm and enable the discovery and discarding of ...DNA analysis ...
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Genotyping wine and table grape cultivars from Apulia (Southern Italy) using microsatellite markers
... Considering the genetic pool, the probability of identi- fying individuals with the same profile at all loci was 6.76 x 10 -7 . This low value can be explained by the high level of heterozygosity of the species, the high ...
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Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]
... genome-wide analysis and identified 28 342 microsatellite motifs in the foxtail ...The microsatellite markers developed here showed their utility in high ampli- fication and polymorphic potential, ...
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